RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 OSBPL3Q9H4L5 887 aa14.86□□□□□ -0.03
CTSD-208ENST00000636843 A1CFQ9NQ94 594 aaKnown RBP14.86□□□□□ -0.03
CTSD-208ENST00000636843 ZNF536O15090 1300 aa14.85□□□□□ -0.03
CTSD-208ENST00000636843 A0A0U1RQG5 324 aaPredicted RBP14.85□□□□□ -0.03
CTSD-208ENST00000636843 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.85□□□□□ -0.03
CTSD-208ENST00000636843 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.85□□□□□ -0.03
CTSD-208ENST00000636843 ARVCFO00192 962 aa14.85□□□□□ -0.03
CTSD-208ENST00000636843 RBM25P49756 843 aaKnown RBP14.85□□□□□ -0.03
CTSD-208ENST00000636843 CTDSPL2Q05D32 466 aa14.85□□□□□ -0.03
CTSD-208ENST00000636843 CCDC174Q6PII3 467 aa14.85□□□□□ -0.03
CTSD-208ENST00000636843 ANAPC4Q9UJX5 808 aa14.85□□□□□ -0.03
CTSD-208ENST00000636843 STX8Q9UNK0 236 aa14.85□□□□□ -0.03
CTSD-208ENST00000636843 SALL3Q9BXA9 1300 aa14.84□□□□□ -0.03
CTSD-208ENST00000636843 SOWAHBA6NEL2 793 aa14.84□□□□□ -0.03
CTSD-208ENST00000636843 FOXP2O15409 715 aa14.84□□□□□ -0.03
CTSD-208ENST00000636843 ALAS1P13196 640 aa14.84□□□□□ -0.03
CTSD-208ENST00000636843 GSPT1P15170 499 aaKnown RBP14.84□□□□□ -0.03
CTSD-208ENST00000636843 IRX5P78411 483 aaPredicted RBP14.84□□□□□ -0.03
CTSD-208ENST00000636843 TNFAIP2Q03169 654 aa14.84□□□□□ -0.03
CTSD-208ENST00000636843 PPIGQ13427 754 aaKnown RBP eCLIP14.84□□□□□ -0.03
CTSD-208ENST00000636843 ALX1Q15699 326 aa14.84□□□□□ -0.03
CTSD-208ENST00000636843 MFSD5Q6N075 450 aa14.84□□□□□ -0.03
CTSD-208ENST00000636843 CCDC129Q6ZRS4 1044 aa14.84□□□□□ -0.03
CTSD-208ENST00000636843 KCTD1Q719H9 257 aa14.84□□□□□ -0.03
CTSD-208ENST00000636843 MAFAQ8NHW3 353 aaPredicted RBP14.84□□□□□ -0.03
CTSD-208ENST00000636843 EVI5LQ96CN4 794 aa14.84□□□□□ -0.03
CTSD-208ENST00000636843 IL17RBQ9NRM6 502 aa14.84□□□□□ -0.03
CTSD-208ENST00000636843 CTAGE5O15320 804 aa14.83□□□□□ -0.04
CTSD-208ENST00000636843 TLR3O15455 904 aaKnown RBP14.83□□□□□ -0.04
CTSD-208ENST00000636843 ORC4O43929 436 aa14.83□□□□□ -0.04
CTSD-208ENST00000636843 RANBP6O60518 1105 aaKnown RBP14.83□□□□□ -0.04
CTSD-208ENST00000636843 NOVP48745 357 aa14.83□□□□□ -0.04
CTSD-208ENST00000636843 NOL8Q76FK4 1167 aaKnown RBP14.83□□□□□ -0.04
CTSD-208ENST00000636843 TICAM2Q86XR7 235 aa14.83□□□□□ -0.04
CTSD-208ENST00000636843 MYLIPQ8WY64 445 aa14.83□□□□□ -0.04
CTSD-208ENST00000636843 HELLSQ9NRZ9 838 aa14.83□□□□□ -0.04
CTSD-208ENST00000636843 PRR12Q9ULL5 1215 aa14.83□□□□□ -0.04
CTSD-208ENST00000636843 NMT2O60551 498 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 CABYRO75952 493 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 FGRP09769 529 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 IQSEC1Q6DN90 963 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 CASC1Q6TDU7 716 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 FAM126BQ8IXS8 530 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 TMEM199Q8N511 208 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 DCAF4Q8WV16 495 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 COL25A1Q9BXS0 654 aaPredicted RBP14.82□□□□□ -0.04
CTSD-208ENST00000636843 SEZ6LQ9BYH1 1024 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 AP5M1Q9H0R1 490 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 INCENPQ9NQS7 918 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 CYP39A1Q9NYL5 469 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 GNEQ9Y223 722 aaKnown RBP14.82□□□□□ -0.04
CTSD-208ENST00000636843 MCM3APO60318 1980 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.82□□□□□ -0.04
CTSD-208ENST00000636843 ZEB2O60315 1214 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 FOSL2P15408 326 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 MUM1L1Q5H9M0 696 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 VPS53Q5VIR6 699 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 TLK2Q86UE8 772 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 SLC43A3Q8NBI5 491 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 CHMP4CQ96CF2 233 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.82□□□□□ -0.04
CTSD-208ENST00000636843 CCPG1Q9ULG6 757 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 Q9Y3F1 56 aa14.82□□□□□ -0.04
CTSD-208ENST00000636843 ASTN1O14525 1302 aa14.81□□□□□ -0.04
CTSD-208ENST00000636843 CD4P01730 458 aa14.81□□□□□ -0.04
CTSD-208ENST00000636843 ICAM1P05362 532 aa14.81□□□□□ -0.04
CTSD-208ENST00000636843 DNAJB2P25686 324 aa14.81□□□□□ -0.04
CTSD-208ENST00000636843 PDE1AP54750 535 aa14.81□□□□□ -0.04
CTSD-208ENST00000636843 BEX3Q00994 111 aa14.81□□□□□ -0.04
CTSD-208ENST00000636843 FSCN1Q16658 493 aaKnown RBP14.81□□□□□ -0.04
CTSD-208ENST00000636843 CCDC96Q2M329 555 aa14.81□□□□□ -0.04
CTSD-208ENST00000636843 TMEM240Q5SV17 173 aa14.81□□□□□ -0.04
CTSD-208ENST00000636843 BTNL9Q6UXG8 535 aa14.81□□□□□ -0.04
CTSD-208ENST00000636843 UNC80Q8N2C7 3258 aa14.8□□□□□ -0.04
CTSD-208ENST00000636843 DYNC1LI2O43237 492 aaPredicted RBP14.8□□□□□ -0.04
CTSD-208ENST00000636843 TOP1P11387 765 aaKnown RBP14.8□□□□□ -0.04
CTSD-208ENST00000636843 SNAP25P60880 206 aa14.8□□□□□ -0.04
CTSD-208ENST00000636843 PSRC1Q6PGN9 363 aaPredicted RBP14.8□□□□□ -0.04
CTSD-208ENST00000636843 NSMFQ6X4W1 530 aa14.8□□□□□ -0.04
CTSD-208ENST00000636843 C16orf59Q7L2K0 433 aa14.8□□□□□ -0.04
CTSD-208ENST00000636843 MORC4Q8TE76 937 aa14.8□□□□□ -0.04
CTSD-208ENST00000636843 RANBP17Q9H2T7 1088 aaKnown RBP14.8□□□□□ -0.04
CTSD-208ENST00000636843 VTA1Q9NP79 307 aa14.8□□□□□ -0.04
CTSD-208ENST00000636843 TOMM22Q9NS69 142 aa14.8□□□□□ -0.04
CTSD-208ENST00000636843 TCP11L1Q9NUJ3 509 aa14.8□□□□□ -0.04
CTSD-208ENST00000636843 MTMR7Q9Y216 660 aa14.8□□□□□ -0.04
CTSD-208ENST00000636843 LOC102724159A0A0B4J2E5 919 aa14.79□□□□□ -0.04
CTSD-208ENST00000636843 FGAP02671 866 aa14.79□□□□□ -0.04
CTSD-208ENST00000636843 CSF2RAP15509 400 aa14.79□□□□□ -0.04
CTSD-208ENST00000636843 SMPD1P17405 629 aa14.79□□□□□ -0.04
CTSD-208ENST00000636843 PWP2Q15269 919 aaKnown RBP14.79□□□□□ -0.04
CTSD-208ENST00000636843 MCMDC2Q4G0Z9 681 aa14.79□□□□□ -0.04
CTSD-208ENST00000636843 RASIP1Q5U651 963 aa14.79□□□□□ -0.04
CTSD-208ENST00000636843 SYDE2Q5VT97 1194 aa14.79□□□□□ -0.04
CTSD-208ENST00000636843 TAPT1Q6NXT6 567 aa14.79□□□□□ -0.04
CTSD-208ENST00000636843 CXCL17Q6UXB2 119 aa14.79□□□□□ -0.04
CTSD-208ENST00000636843 TIFAQ96CG3 184 aa14.79□□□□□ -0.04
CTSD-208ENST00000636843 PPP1R12CQ9BZL4 782 aa14.79□□□□□ -0.04
CTSD-208ENST00000636843 ZNF576Q9H609 170 aa14.79□□□□□ -0.04
CTSD-208ENST00000636843 ADD3Q9UEY8 706 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms