RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 ITGB8P26012 769 aa21.57■■□□□ 1.04
CLN6-214ENST00000636314 SLC16A2P36021 539 aa21.57■■□□□ 1.04
CLN6-214ENST00000636314 SNAP25P60880 206 aa21.57■■□□□ 1.04
CLN6-214ENST00000636314 TKFCQ3LXA3 575 aa21.57■■□□□ 1.04
CLN6-214ENST00000636314 SYDE2Q5VT97 1194 aa21.57■■□□□ 1.04
CLN6-214ENST00000636314 TTBK2Q6IQ55 1244 aa21.57■■□□□ 1.04
CLN6-214ENST00000636314 DGKHQ86XP1 1220 aa21.57■■□□□ 1.04
CLN6-214ENST00000636314 MSL3Q8N5Y2 521 aaKnown RBP21.57■■□□□ 1.04
CLN6-214ENST00000636314 LENG1Q96BZ8 264 aaPredicted RBP21.57■■□□□ 1.04
CLN6-214ENST00000636314 CNPY2Q9Y2B0 182 aa21.57■■□□□ 1.04
CLN6-214ENST00000636314 CDH23Q9H251 3354 aa21.56■■□□□ 1.04
CLN6-214ENST00000636314 ALAS1P13196 640 aa21.56■■□□□ 1.04
CLN6-214ENST00000636314 AKR1A1P14550 325 aa21.56■■□□□ 1.04
CLN6-214ENST00000636314 BTNL9Q6UXG8 535 aa21.56■■□□□ 1.04
CLN6-214ENST00000636314 CCPG1Q9ULG6 757 aa21.56■■□□□ 1.04
CLN6-214ENST00000636314 VCANP13611 3396 aa21.56■■□□□ 1.04
CLN6-214ENST00000636314 MCM3APO60318 1980 aa21.56■■□□□ 1.04
CLN6-214ENST00000636314 SYNGAP1Q96PV0 1343 aa21.55■■□□□ 1.04
CLN6-214ENST00000636314 SGSM2O43147 1006 aa21.55■■□□□ 1.04
CLN6-214ENST00000636314 ZNF543Q08ER8 600 aa21.55■■□□□ 1.04
CLN6-214ENST00000636314 ZNF467Q7Z7K2 595 aaPredicted RBP21.55■■□□□ 1.04
CLN6-214ENST00000636314 TRERF1Q96PN7 1200 aa21.55■■□□□ 1.04
CLN6-214ENST00000636314 ZSCAN10Q96SZ4 725 aaPredicted RBP21.55■■□□□ 1.04
CLN6-214ENST00000636314 UBAC1Q9BSL1 405 aa21.55■■□□□ 1.04
CLN6-214ENST00000636314 RANBP17Q9H2T7 1088 aaKnown RBP21.55■■□□□ 1.04
CLN6-214ENST00000636314 KAT14Q9H8E8 782 aa21.55■■□□□ 1.04
CLN6-214ENST00000636314 TMEM39AQ9NV64 488 aa21.55■■□□□ 1.04
CLN6-214ENST00000636314 ZSWIM5Q9P217 1185 aa21.55■■□□□ 1.04
CLN6-214ENST00000636314 TNKSO95271 1327 aa21.55■■□□□ 1.04
CLN6-214ENST00000636314 KIAA0355O15063 1070 aa21.54■■□□□ 1.04
CLN6-214ENST00000636314 ICAM1P05362 532 aa21.54■■□□□ 1.04
CLN6-214ENST00000636314 ZNF865P0CJ78 1059 aaPredicted RBP21.54■■□□□ 1.04
CLN6-214ENST00000636314 SNHG28P0DPA3 235 aa21.54■■□□□ 1.04
CLN6-214ENST00000636314 EPHB4P54760 987 aa21.54■■□□□ 1.04
CLN6-214ENST00000636314 PTH1RQ03431 593 aa21.54■■□□□ 1.04
CLN6-214ENST00000636314 FPGSQ05932 587 aa21.54■■□□□ 1.04
CLN6-214ENST00000636314 PNMA1Q8ND90 353 aa21.54■■□□□ 1.04
CLN6-214ENST00000636314 A1CFQ9NQ94 594 aaKnown RBP21.54■■□□□ 1.04
CLN6-214ENST00000636314 U3KPZ7 1027 aaPredicted RBP21.54■■□□□ 1.04
CLN6-214ENST00000636314 TRDNQ13061 729 aa21.53■■□□□ 1.04
CLN6-214ENST00000636314 GPATCH4Q5T3I0 446 aaKnown RBP21.53■■□□□ 1.04
CLN6-214ENST00000636314 MAMDC4Q6UXC1 1216 aa21.53■■□□□ 1.04
CLN6-214ENST00000636314 ENAHQ8N8S7 591 aaPredicted RBP21.53■■□□□ 1.04
CLN6-214ENST00000636314 STARD7Q9NQZ5 370 aa21.53■■□□□ 1.04
CLN6-214ENST00000636314 ADAMTS4O75173 837 aa21.52■■□□□ 1.04
CLN6-214ENST00000636314 FGD4Q96M96 766 aa21.52■■□□□ 1.04
CLN6-214ENST00000636314 TSEN34Q9BSV6 310 aaKnown RBP21.52■■□□□ 1.04
CLN6-214ENST00000636314 ZHX1Q9UKY1 873 aaPredicted RBP21.52■■□□□ 1.04
CLN6-214ENST00000636314 SYNRGQ9UMZ2 1314 aa21.52■■□□□ 1.03
CLN6-214ENST00000636314 DCDC2CA8MYV0 355 aa21.51■■□□□ 1.03
CLN6-214ENST00000636314 CYP21A2P08686 494 aa21.51■■□□□ 1.03
CLN6-214ENST00000636314 ACLYP53396 1101 aa21.51■■□□□ 1.03
CLN6-214ENST00000636314 MUM1L1Q5H9M0 696 aa21.51■■□□□ 1.03
CLN6-214ENST00000636314 NUP133Q8WUM0 1156 aa21.51■■□□□ 1.03
CLN6-214ENST00000636314 ANKS1AQ92625 1134 aa21.51■■□□□ 1.03
CLN6-214ENST00000636314 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.51■■□□□ 1.03
CLN6-214ENST00000636314 FAM184BQ9ULE4 1060 aa21.51■■□□□ 1.03
CLN6-214ENST00000636314 SPTBN5Q9NRC6 3674 aaKnown RBP21.51■■□□□ 1.03
CLN6-214ENST00000636314 LRRC37A2A6NM11 1700 aa21.5■■□□□ 1.03
CLN6-214ENST00000636314 TMEM265A0A087WTH1 108 aa21.5■■□□□ 1.03
CLN6-214ENST00000636314 SNAI1O95863 264 aaPredicted RBP21.5■■□□□ 1.03
CLN6-214ENST00000636314 GOLGA8HP0CJ92 632 aa21.5■■□□□ 1.03
CLN6-214ENST00000636314 CNTN2Q02246 1040 aa21.5■■□□□ 1.03
CLN6-214ENST00000636314 FAAP100Q0VG06 881 aa21.5■■□□□ 1.03
CLN6-214ENST00000636314 IFIT1BQ5T764 474 aaKnown RBP21.5■■□□□ 1.03
CLN6-214ENST00000636314 NSMFQ6X4W1 530 aa21.5■■□□□ 1.03
CLN6-214ENST00000636314 ARMCX2Q7L311 632 aa21.5■■□□□ 1.03
CLN6-214ENST00000636314 RALYLQ86SE5 291 aaKnown RBP21.5■■□□□ 1.03
CLN6-214ENST00000636314 FAM133AQ8N9E0 248 aa21.5■■□□□ 1.03
CLN6-214ENST00000636314 PNMA2Q9UL42 364 aa21.5■■□□□ 1.03
CLN6-214ENST00000636314 LCTP09848 1927 aa21.5■■□□□ 1.03
CLN6-214ENST00000636314 ASPRV1Q53RT3 343 aa21.49■■□□□ 1.03
CLN6-214ENST00000636314 KIAA1211Q6ZU35 1233 aa21.49■■□□□ 1.03
CLN6-214ENST00000636314 ANKRD33Q7Z3H0 272 aa21.49■■□□□ 1.03
CLN6-214ENST00000636314 CYP39A1Q9NYL5 469 aa21.49■■□□□ 1.03
CLN6-214ENST00000636314 MOXD2PA6NHM9 499 aa21.48■■□□□ 1.03
CLN6-214ENST00000636314 DNAJB2P25686 324 aa21.48■■□□□ 1.03
CLN6-214ENST00000636314 ACVR2BQ13705 512 aa21.48■■□□□ 1.03
CLN6-214ENST00000636314 KCNA10Q16322 511 aa21.48■■□□□ 1.03
CLN6-214ENST00000636314 CYB5R4Q7L1T6 521 aa21.48■■□□□ 1.03
CLN6-214ENST00000636314 SKAP1Q86WV1 359 aa21.48■■□□□ 1.03
CLN6-214ENST00000636314 CCDC144CPQ8IYA2 1237 aa21.48■■□□□ 1.03
CLN6-214ENST00000636314 TOX2Q96NM4 488 aa21.48■■□□□ 1.03
CLN6-214ENST00000636314 ABHD16BQ9H3Z7 469 aa21.48■■□□□ 1.03
CLN6-214ENST00000636314 MYH6P13533 1939 aa21.48■■□□□ 1.03
CLN6-214ENST00000636314 WDR19Q8NEZ3 1342 aa21.48■■□□□ 1.03
CLN6-214ENST00000636314 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.47■■□□□ 1.03
CLN6-214ENST00000636314 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.47■■□□□ 1.03
CLN6-214ENST00000636314 ASB14A6NK59 587 aa21.47■■□□□ 1.03
CLN6-214ENST00000636314 PARP1P09874 1014 aaKnown RBP21.47■■□□□ 1.03
CLN6-214ENST00000636314 GRIN2CQ14957 1233 aa21.47■■□□□ 1.03
CLN6-214ENST00000636314 BMP2KLQ5H9B9 411 aa21.47■■□□□ 1.03
CLN6-214ENST00000636314 KLHDC9Q8NEP7 349 aa21.47■■□□□ 1.03
CLN6-214ENST00000636314 NCOA7Q8NI08 942 aa21.47■■□□□ 1.03
CLN6-214ENST00000636314 MAP4K1Q92918 833 aa21.47■■□□□ 1.03
CLN6-214ENST00000636314 VTI1AQ96AJ9 217 aa21.47■■□□□ 1.03
CLN6-214ENST00000636314 UBA5Q9GZZ9 404 aa21.47■■□□□ 1.03
CLN6-214ENST00000636314 CPVLQ9H3G5 476 aa21.47■■□□□ 1.03
CLN6-214ENST00000636314 RBM8AQ9Y5S9 174 aaKnown RBP21.47■■□□□ 1.03
CLN6-214ENST00000636314 MYADML2A6NDP7 307 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms