RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 IKQ13123 557 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 KCNA10Q16322 511 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 MUM1L1Q5H9M0 696 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 AKNAD1Q5T1N1 836 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 TTBK2Q6IQ55 1244 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 CCDC174Q6PII3 467 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 ARMCX2Q7L311 632 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 ANKRD33Q7Z3H0 272 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 TBC1D10CQ8IV04 446 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 DEFB123Q8N688 67 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 BADQ92934 168 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 RILPL2Q969X0 211 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 TRERF1Q96PN7 1200 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 UPF3AQ9H1J1 476 aaKnown RBP8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 RANBP17Q9H2T7 1088 aaKnown RBP8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 PRDM5Q9NQX1 630 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 CYP39A1Q9NYL5 469 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 PRKAG2Q9UGJ0 569 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 ISY1Q9ULR0 285 aaKnown RBP8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 TTC28Q96AY4 2481 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 LAMA4Q16363 1823 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 LRRC37A2A6NM11 1700 aa8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 KIAA0355O15063 1070 aa8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 ICAM1P05362 532 aa8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 CLTBP09497 229 aa8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 ALAS1P13196 640 aa8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 SLC16A2P36021 539 aa8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 CDK7P50613 346 aa8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 SHHQ15465 462 aa8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 RRP12Q5JTH9 1297 aaKnown RBP8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 C9orf50Q5SZB4 431 aa8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 MFSD6Q6ZSS7 791 aa8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 NUP133Q8WUM0 1156 aa8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 TTC14Q96N46 770 aa8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 TOX2Q96NM4 488 aa8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 MTMR10Q9NXD2 777 aa8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 DDX49Q9Y6V7 483 aaKnown RBP8.63□□□□□ -1.03
CACNA1A-222ENST00000636022 ELP1O95163 1332 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 FRMPD2Q68DX3 1309 aaPredicted RBP8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 ASB14A6NK59 587 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 PQBP1O60828 265 aaKnown RBP8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 ASGR1P07306 291 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 C6orf222P0C671 652 aaPredicted RBP8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 SNHG28P0DPA3 235 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 PDHBP11177 359 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 FXR2P51116 673 aaKnown RBP eCLIP8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 MFAP1P55081 439 aaKnown RBP8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 FAAP100Q0VG06 881 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 CCDC96Q2M329 555 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 GNASQ5JWF2 1037 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 SYDE2Q5VT97 1194 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 CWC27Q6UX04 472 aaKnown RBP8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 MORC4Q8TE76 937 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 PURBQ96QR8 312 aaKnown RBP8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 GPCPD1Q9NPB8 672 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 STARD7Q9NQZ5 370 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 TOMM22Q9NS69 142 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 CCPG1Q9ULG6 757 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 MTMR7Q9Y216 660 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 GNEQ9Y223 722 aaKnown RBP8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 REV3LO60673 3130 aa8.62□□□□□ -1.03
CACNA1A-222ENST00000636022 MUC3AQ02505 3323 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 NEDD4P46934 1319 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 MYO9BQ13459 2157 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 HAX1O00165 279 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 NFIBO00712 420 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 ZNF213O14771 459 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 PTGS1P23219 599 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 NT5C2P49902 561 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 EPHB4P54760 987 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 TNFAIP2Q03169 654 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 ZNF543Q08ER8 600 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 TMEM63BQ5T3F8 832 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 FAM109BQ6ICB4 259 aaPredicted RBP8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 TAPT1Q6NXT6 567 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 DGKHQ86XP1 1220 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 PCSK9Q8NBP7 692 aaKnown RBP8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 CLEC4DQ8WXI8 215 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 ANKS1AQ92625 1134 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 ESR2Q92731 530 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 GLT1D1Q96MS3 346 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 RNF41Q9H4P4 317 aaPredicted RBP8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 SPC25Q9HBM1 224 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 PDGFCQ9NRA1 345 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 TMEM39AQ9NV64 488 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 TBX21Q9UL17 535 aa8.61□□□□□ -1.03
CACNA1A-222ENST00000636022 BDP1A6H8Y1 2624 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 SPDYE4A6NLX3 237 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 DCDC2CA8MYV0 355 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 ARVCFO00192 962 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 HIP1O00291 1037 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 RAG1P15918 1043 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 SMPD1P17405 629 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 PDE4AP27815 886 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 BEX3Q00994 111 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 BAATQ14032 418 aaPredicted RBP8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 IQSEC1Q6DN90 963 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 NSMFQ6X4W1 530 aa8.6□□□□□ -1.03
CACNA1A-222ENST00000636022 FBXO16Q8IX29 292 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms