RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 CASP8AP2Q9UKL3 1982 aa17.65■□□□□ 0.42
CLN8-209ENST00000635970 A0A1W2PQ27 194 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 A0A1W2PQ64 194 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 A0A1W2PQD8 194 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 DTNBO60941 627 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 CCZ1BP86790 482 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 CCZ1P86791 482 aaPredicted RBP17.64■□□□□ 0.41
CLN8-209ENST00000635970 FGD1P98174 961 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 FBXL16Q8N461 479 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 LPAR1Q92633 364 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 PARK7Q99497 189 aaKnown RBP17.64■□□□□ 0.41
CLN8-209ENST00000635970 TANGO6Q9C0B7 1094 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 FAM53CQ9NYF3 392 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 SLC45A1Q9Y2W3 748 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 A0A0G2JMZ2 1700 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 SLU7O95391 586 aaKnown RBP17.64■□□□□ 0.41
CLN8-209ENST00000635970 HOXA7P31268 230 aaPredicted RBP17.64■□□□□ 0.41
CLN8-209ENST00000635970 NT5C2P49902 561 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 FAM83BQ5T0W9 1011 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 CCDC150Q8NCX0 1101 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 ZNF274Q96GC6 653 aaPredicted RBP17.64■□□□□ 0.41
CLN8-209ENST00000635970 CFHR5Q9BXR6 569 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 SENP2Q9HC62 589 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 ZFYVE28Q9HCC9 887 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 ADGRA2Q96PE1 1338 aa17.64■□□□□ 0.41
CLN8-209ENST00000635970 WDR46O15213 610 aaKnown RBP17.63■□□□□ 0.41
CLN8-209ENST00000635970 HSPA8P11142 646 aaKnown RBP17.63■□□□□ 0.41
CLN8-209ENST00000635970 TOP1P11387 765 aaKnown RBP17.63■□□□□ 0.41
CLN8-209ENST00000635970 IRX3P78415 501 aaPredicted RBP17.63■□□□□ 0.41
CLN8-209ENST00000635970 PABPC4Q13310 644 aaKnown RBP eCLIP17.63■□□□□ 0.41
CLN8-209ENST00000635970 SEC23AQ15436 765 aa17.63■□□□□ 0.41
CLN8-209ENST00000635970 ADALQ6DHV7 355 aa17.63■□□□□ 0.41
CLN8-209ENST00000635970 GMCL1P1Q8NEA9 526 aa17.63■□□□□ 0.41
CLN8-209ENST00000635970 SMCR8Q8TEV9 937 aaPredicted RBP17.63■□□□□ 0.41
CLN8-209ENST00000635970 LRRC2Q9BYS8 371 aa17.63■□□□□ 0.41
CLN8-209ENST00000635970 GPHNQ9NQX3 736 aaPredicted RBP17.63■□□□□ 0.41
CLN8-209ENST00000635970 CPA4Q9UI42 421 aa17.63■□□□□ 0.41
CLN8-209ENST00000635970 USP17L15C9J2P7 530 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 USP17L13C9JLJ4 530 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 USP17L11C9JVI0 530 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 USP17L18D6R9N7 530 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 USP17L22D6RA61 530 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 USP17L17D6RBQ6 530 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 USP17L19D6RCP7 530 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 USP17L20D6RJB6 530 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 CCP110O43303 1012 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 PRC1O43663 620 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 TLR2O60603 784 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 PEX10O60683 326 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 TPM4P67936 248 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 USP17L24Q0WX57 530 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 SLFN13Q68D06 897 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 SAMD1Q6SPF0 538 aaPredicted RBP17.62■□□□□ 0.41
CLN8-209ENST00000635970 CATSPERGQ6ZRH7 1159 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 DGKHQ86XP1 1220 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 ZNF592Q92610 1267 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 PNMA3Q9UL41 463 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 IFIT3O14879 490 aaKnown RBP17.62■□□□□ 0.41
CLN8-209ENST00000635970 OSBPP22059 807 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 LBX1P52954 281 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 EXOSC10Q01780 885 aaKnown RBP17.62■□□□□ 0.41
CLN8-209ENST00000635970 ZNF771Q7L3S4 317 aaPredicted RBP17.62■□□□□ 0.41
CLN8-209ENST00000635970 P2RX7Q99572 595 aaKnown RBP17.62■□□□□ 0.41
CLN8-209ENST00000635970 FBXO28Q9NVF7 368 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 SYNPO2Q9UMS6 1093 aa17.62■□□□□ 0.41
CLN8-209ENST00000635970 PTPDC1A2A3K4 754 aa17.61■□□□□ 0.41
CLN8-209ENST00000635970 HERVK_113P62684 666 aa17.61■□□□□ 0.41
CLN8-209ENST00000635970 IFIT1BQ5T764 474 aaKnown RBP17.61■□□□□ 0.41
CLN8-209ENST00000635970 POTEEQ6S8J3 1075 aa17.61■□□□□ 0.41
CLN8-209ENST00000635970 MRPS27Q92552 414 aaKnown RBP17.61■□□□□ 0.41
CLN8-209ENST00000635970 DDX11Q96FC9 970 aa17.61■□□□□ 0.41
CLN8-209ENST00000635970 RTEL1Q9NZ71 1219 aa17.61■□□□□ 0.41
CLN8-209ENST00000635970 ZNF215Q9UL58 517 aaPredicted RBP17.61■□□□□ 0.41
CLN8-209ENST00000635970 MGAMO43451 1857 aa17.61■□□□□ 0.41
CLN8-209ENST00000635970 GPR25O00155 361 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 FLOT1O75955 427 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 ECM2O94769 699 aaPredicted RBP17.6■□□□□ 0.41
CLN8-209ENST00000635970 ZRSR1Q15695 479 aaKnown RBP17.6■□□□□ 0.41
CLN8-209ENST00000635970 TMEM67Q5HYA8 995 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 FSIP1Q8NA03 581 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 PNMA1Q8ND90 353 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 USP28Q96RU2 1077 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 GOLPH3LQ9H4A5 285 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 KAT14Q9H8E8 782 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 L2HGDHQ9H9P8 463 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 SPDYE16A6NNV3 312 aaPredicted RBP17.6■□□□□ 0.41
CLN8-209ENST00000635970 SLC1A4P43007 532 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 ME1P48163 572 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 CTCFP49711 727 aaPredicted RBP17.6■□□□□ 0.41
CLN8-209ENST00000635970 CCDC178Q5BJE1 867 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 KCTD1Q719H9 257 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 FMR1NBQ8N0W7 255 aaPredicted RBP17.6■□□□□ 0.41
CLN8-209ENST00000635970 ANKRD13CQ8N6S4 541 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 IGDCC4Q8TDY8 1250 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 ANKS1AQ92625 1134 aa17.6■□□□□ 0.41
CLN8-209ENST00000635970 FRMPD2Q68DX3 1309 aaPredicted RBP17.59■□□□□ 0.41
CLN8-209ENST00000635970 ERICH2A1L162 156 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 CCDC66A2RUB6 948 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 SLFN14P0C7P3 912 aa17.59■□□□□ 0.41
CLN8-209ENST00000635970 EVCP57679 992 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms