RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 SYKP43405 635 aa11.38□□□□□ -0.59
CACNA1A-216ENST00000635742 IL17AQ16552 155 aa11.38□□□□□ -0.59
CACNA1A-216ENST00000635742 LETM2Q2VYF4 491 aa11.38□□□□□ -0.59
CACNA1A-216ENST00000635742 NEK8Q86SG6 692 aa11.38□□□□□ -0.59
CACNA1A-216ENST00000635742 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.38□□□□□ -0.59
CACNA1A-216ENST00000635742 ERCC4Q92889 916 aaPredicted RBP11.38□□□□□ -0.59
CACNA1A-216ENST00000635742 DCPSQ96C86 337 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-216ENST00000635742 PANK2Q9BZ23 570 aa11.38□□□□□ -0.59
CACNA1A-216ENST00000635742 TMEM60Q9H2L4 133 aa11.38□□□□□ -0.59
CACNA1A-216ENST00000635742 RANBP17Q9H2T7 1088 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-216ENST00000635742 PSTPIP2Q9H939 334 aa11.38□□□□□ -0.59
CACNA1A-216ENST00000635742 ZC3H4Q9UPT8 1303 aaKnown RBP11.38□□□□□ -0.59
CACNA1A-216ENST00000635742 VWA3AA6NCI4 1184 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 GLTPD2A6NH11 291 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 USP17L15C9J2P7 530 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 USP17L13C9JLJ4 530 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 USP17L11C9JVI0 530 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 USP17L18D6R9N7 530 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 USP17L22D6RA61 530 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 USP17L17D6RBQ6 530 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 USP17L19D6RCP7 530 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 USP17L20D6RJB6 530 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 WDR46O15213 610 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 PLA2G6O60733 806 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 TYRO3Q06418 890 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 USP17L24Q0WX57 530 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 SUPT20HL1Q3ZLR7 823 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 CCDC174Q6PII3 467 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 USP17L6PQ6QN14 398 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 FAM160B2Q86V87 743 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 SULF1Q8IWU6 871 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 RNF214Q8ND24 703 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 LPAR1Q92633 364 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 FERMT2Q96AC1 680 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 WDR18Q9BV38 432 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 PICK1Q9NRD5 415 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 EMILIN3Q9NT22 766 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 FEM1BQ9UK73 627 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 KCNH3Q9ULD8 1083 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 OPLAHO14841 1288 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 CTAGE5O15320 804 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 GRIN3BO60391 1043 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 CCNT1O60563 726 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 USP2O75604 605 aaPredicted RBP11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 VCAM1P19320 739 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 MRPL12P52815 198 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 SPP2Q13103 211 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 NOL9Q5SY16 702 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 USP50Q70EL3 339 aaPredicted RBP11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 CHURC1Q8WUH1 139 aa11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 P2RX7Q99572 595 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-216ENST00000635742 PTPRFP10586 1907 aa11.36□□□□□ -0.59
CACNA1A-216ENST00000635742 MEIS2O14770 477 aa11.36□□□□□ -0.59
CACNA1A-216ENST00000635742 KRT26Q7Z3Y9 468 aa11.36□□□□□ -0.59
CACNA1A-216ENST00000635742 ZNF280CQ8ND82 737 aa11.36□□□□□ -0.59
CACNA1A-216ENST00000635742 SYMPKQ92797 1274 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-216ENST00000635742 EPSTI1Q96J88 318 aa11.36□□□□□ -0.59
CACNA1A-216ENST00000635742 SDF4Q9BRK5 362 aa11.36□□□□□ -0.59
CACNA1A-216ENST00000635742 AS3MTQ9HBK9 375 aa11.36□□□□□ -0.59
CACNA1A-216ENST00000635742 FAM13BQ9NYF5 915 aa11.36□□□□□ -0.59
CACNA1A-216ENST00000635742 RLFQ13129 1914 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 A0A087WWV3 80 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 A0A087X0B3 334 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 POTECB2RU33 542 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 NEMFO60524 1076 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 TDP2O95551 362 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 CCDC192P0DO97 292 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 LONRF3Q496Y0 759 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 ARL6IP4Q66PJ3 421 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 POTEDQ86YR6 584 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 CDCA5Q96FF9 252 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 TIGD1Q96MW7 591 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 SLF1Q9BQI6 1058 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 ANO3Q9BYT9 981 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 TANGO6Q9C0B7 1094 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 SNCAIPQ9Y6H5 919 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 ZHX2Q9Y6X8 837 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 RBBP6Q7Z6E9 1792 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 SLC37A4O43826 429 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 USP14P54578 494 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 BACE1P56817 501 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 VGLL4Q14135 290 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 KRBA2Q6ZNG9 492 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 PDILTQ8N807 584 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 GLT8D2Q9H1C3 349 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 TAF1DQ9H5J8 278 aaPredicted RBP11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 RPAP3Q9H6T3 665 aaPredicted RBP11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 SERTAD1Q9UHV2 236 aa11.35□□□□□ -0.59
CACNA1A-216ENST00000635742 ZNF536O15090 1300 aa11.34□□□□□ -0.59
CACNA1A-216ENST00000635742 COL11A1P12107 1806 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-216ENST00000635742 FOXN1O15353 648 aa11.34□□□□□ -0.59
CACNA1A-216ENST00000635742 POLR2DO15514 142 aaKnown RBP11.34□□□□□ -0.59
CACNA1A-216ENST00000635742 ACTN4O43707 911 aaKnown RBP11.34□□□□□ -0.59
CACNA1A-216ENST00000635742 OR52Z1P0C646 297 aa11.34□□□□□ -0.59
CACNA1A-216ENST00000635742 HOXA13P31271 388 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-216ENST00000635742 HMGCS2P54868 508 aa11.34□□□□□ -0.59
CACNA1A-216ENST00000635742 EAPPQ56P03 285 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-216ENST00000635742 SASS6Q6UVJ0 657 aa11.34□□□□□ -0.59
CACNA1A-216ENST00000635742 C12orf42Q96LP6 360 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms