RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 FRMD6Q96NE9 622 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 ASB16Q96NS5 453 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 ZNF747Q9BV97 191 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 DSCC1Q9BVC3 393 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 MKRN2Q9H000 416 aaKnown RBP2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 RNF38Q9H0F5 515 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 ANTXR1Q9H6X2 564 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 FBXL21Q9UKT6 434 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 INVSQ9Y283 1065 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 PRR36Q9H6K5 1346 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 FAM86C2PA6NEL3 165 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 SRGAP3O43295 1099 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 NCAM1P13591 858 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 LMNB2Q03252 620 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 CDSNQ15517 529 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 RGL3Q3MIN7 710 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 RTP2Q5QGT7 225 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 SNAP47Q5SQN1 464 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 OVOS1Q6IE37 1185 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 TTLL7Q6ZT98 887 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 ADAMTS17Q8TE56 1095 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 DDX11Q96FC9 970 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 DUSP9Q99956 384 aaKnown RBP2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 PCED1AQ9H1Q7 454 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 PDLIM7Q9NR12 457 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 SPATA6Q9NWH7 488 aaPredicted RBP2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 TSC22D4Q9Y3Q8 395 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 PCDHB12Q9Y5F1 795 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 AK5Q9Y6K8 562 aa2.1□□□□□ -2.07
SMARCB1-209ENST00000635578 SMARCA5O60264 1052 aaPredicted RBP2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 PRPF40AO75400 957 aaKnown RBP2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 GBP2P32456 591 aaPredicted RBP2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 RAD51AP2Q09MP3 1159 aa2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 ICAM4Q14773 271 aa2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 TAF1CQ15572 869 aaPredicted RBP2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 HLA-DQA1Q5Y7H0 255 aa2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 CWF19L1Q69YN2 538 aaKnown RBP2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 ZNF585AQ6P3V2 769 aa2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 BORAQ6PGQ7 559 aa2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 REC114Q7Z4M0 266 aa2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 FAM124AQ86V42 546 aa2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 LGI4Q8N135 537 aa2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 GOLM1Q8NBJ4 401 aa2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 SYT3Q9BQG1 590 aa2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 NOC4LQ9BVI4 516 aaKnown RBP2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 SLC12A9Q9BXP2 914 aa2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 ZNF341Q9BYN7 854 aa2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 KLC2Q9H0B6 622 aa2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 GMIPQ9P107 970 aa2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 PCDHB14Q9Y5E9 798 aa2.09□□□□□ -2.07
SMARCB1-209ENST00000635578 MINDY4BA8MYZ0 360 aa2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 H0Y8X5 98 aa2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 GSNP06396 782 aa2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 KIAA2012Q0VF49 1180 aa2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 AUHQ13825 339 aaKnown RBP2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 C9orf131Q5VYM1 1079 aa2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 MCTP2Q6DN12 878 aa2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 CABP7Q86V35 215 aa2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 TMEM192Q8IY95 271 aa2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 RHOVQ96L33 236 aa2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 SLC6A18Q96N87 628 aa2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 TMEM74Q96NL1 305 aa2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 DEF6Q9H4E7 631 aa2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 BRMS1Q9HCU9 246 aa2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 C11orf21Q9P2W6 132 aa2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 GNEQ9Y223 722 aaKnown RBP2.08□□□□□ -2.08
SMARCB1-209ENST00000635578 NPEPPSL1A6NEC2 478 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 MROH6A6NGR9 719 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 DDX3XO00571 662 aaKnown RBP eCLIP2.07□□□□□ -2.081e-7■■■□□ 18.9
SMARCB1-209ENST00000635578 FGF10O15520 208 aaPredicted RBP2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 LAMTOR5O43504 91 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 C8BP07358 591 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 GLI4P10075 376 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 CYP2C8P10632 490 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 THBS2P35442 1172 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 CACNB2Q08289 660 aaPredicted RBP2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 PSMD2Q13200 908 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 MPP2Q14168 576 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 FHL2Q14192 279 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 CWF19L2Q2TBE0 894 aaKnown RBP2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 SPDYAQ5MJ70 313 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 CYP2R1Q6VVX0 501 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 NLRC3Q7RTR2 1065 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 STK32CQ86UX6 486 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 RELL1Q8IUW5 271 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 CCDC144CPQ8IYA2 1237 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 BRF1Q92994 677 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 ATG4CQ96DT6 458 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 TSPAN17Q96FV3 270 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 FAM161BQ96MY7 647 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 PTCHD1Q96NR3 888 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 CDK5RAP1Q96SZ6 601 aaKnown RBP2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 GORASP1Q9BQQ3 440 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 SSBP3Q9BWW4 388 aaPredicted RBP2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 JADE2Q9NQC1 790 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 FAM86C1Q9NVL1 165 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 PPP4R1LQ9P1A2 415 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 FBLN5Q9UBX5 448 aa2.07□□□□□ -2.08
SMARCB1-209ENST00000635578 RWDD3Q9Y3V2 267 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms