RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 CCDC83Q8IWF9 413 aa11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 CMTR1Q8N1G2 835 aaKnown RBP11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 SMARCC2Q8TAQ2 1214 aa11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 SMCR8Q8TEV9 937 aaPredicted RBP11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 ZFYVE28Q9HCC9 887 aa11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 TSHZ2Q9NRE2 1034 aa11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 RBPJLQ9UBG7 517 aa11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 PNMA2Q9UL42 364 aa11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 RBBP6Q7Z6E9 1792 aaKnown RBP11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 CEP350Q5VT06 3117 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 hCG_1984214I3L0E3 225 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 ZBTB5O15062 677 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 ZBED4O75132 1171 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 ICAM1P05362 532 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 ERVK-9P63128 1117 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 ERVK-24P63145 666 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 MAP2K1Q02750 393 aaPredicted RBP11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 TMEM132BQ14DG7 1078 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 QRICH1Q2TAL8 776 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 NOM1Q5C9Z4 860 aaKnown RBP11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 C17orf99Q6UX52 265 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 ZNF713Q8N859 430 aaPredicted RBP11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 JMYQ8N9B5 988 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 RRP36Q96EU6 259 aaKnown RBP11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 INTS4Q96HW7 963 aaKnown RBP11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 PIGSQ96S52 555 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 TEX13BQ9BXU2 312 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 TXNRD2Q9NNW7 524 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 RNF186Q9NXI6 227 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 BTBD7Q9P203 1132 aa11.4□□□□□ -0.58
SOX2-OT-249ENST00000628810 ZNF236Q9UL36 1845 aa11.39□□□□□ -0.59
SOX2-OT-249ENST00000628810 PNMA6FA0A0J9YX94 578 aa11.39□□□□□ -0.59
SOX2-OT-249ENST00000628810 PTPDC1A2A3K4 754 aa11.39□□□□□ -0.59
SOX2-OT-249ENST00000628810 PPP1R11O60927 126 aaPredicted RBP11.39□□□□□ -0.59
SOX2-OT-249ENST00000628810 DEXIO95424 95 aa11.39□□□□□ -0.59
SOX2-OT-249ENST00000628810 TRAF1Q13077 416 aa11.39□□□□□ -0.59
SOX2-OT-249ENST00000628810 PKN1Q16512 942 aa11.39□□□□□ -0.59
SOX2-OT-249ENST00000628810 PFKFB3Q16875 520 aaPredicted RBP11.39□□□□□ -0.59
SOX2-OT-249ENST00000628810 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.39□□□□□ -0.59
SOX2-OT-249ENST00000628810 TRIM22Q8IYM9 498 aa11.39□□□□□ -0.59
SOX2-OT-249ENST00000628810 FAM177A1Q8N128 213 aaPredicted RBP11.39□□□□□ -0.59
SOX2-OT-249ENST00000628810 PHKBQ93100 1093 aa11.39□□□□□ -0.59
SOX2-OT-249ENST00000628810 SEC63Q9UGP8 760 aaKnown RBP11.39□□□□□ -0.59
SOX2-OT-249ENST00000628810 JAK2O60674 1132 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 SCG2P13521 617 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 FDPSP14324 419 aaKnown RBP11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 COPB2P35606 906 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 HMGN5P82970 282 aaKnown RBP11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 SSRP1Q08945 709 aaKnown RBP11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 TKFCQ3LXA3 575 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 PPP1R18Q6NYC8 613 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 HOMER1Q86YM7 354 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 RIOX2Q8IUF8 465 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 TEX2Q8IWB9 1127 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 CCDC82Q8N4S0 544 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 SHCBP1Q8NEM2 672 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 GPRC5AQ8NFJ5 357 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 AMNQ9BXJ7 453 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 SLC26A6Q9BXS9 759 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 MAF1Q9H063 256 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 SPATC1LQ9H0A9 340 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 VAT1LQ9HCJ6 419 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 WBP1LQ9NX94 342 aa11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.38□□□□□ -0.59
SOX2-OT-249ENST00000628810 ABCB11O95342 1321 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 SLC25A27O95847 323 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 STAT3P40763 770 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 SNAP25P60880 206 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 GHRHRQ02643 423 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 BECN1Q14457 450 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 WWC2Q6AWC2 1192 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 SNRNP48Q6IEG0 339 aaKnown RBP11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 CCDC174Q6PII3 467 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 FBXO11Q86XK2 927 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 ANKRD13CQ8N6S4 541 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 AGBL1Q96MI9 1066 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 PAGR1Q9BTK6 254 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 MOV10L1Q9BXT6 1211 aaKnown RBP11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 R3HDMLQ9H3Y0 253 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 RAVER2Q9HCJ3 691 aaKnown RBP11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 BARHL2Q9NY43 387 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 CCPG1Q9ULG6 757 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 CTDP1Q9Y5B0 961 aaPredicted RBP11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 V9GY48 417 aaPredicted RBP11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 MYH6P13533 1939 aa11.37□□□□□ -0.59
SOX2-OT-249ENST00000628810 hCG_1642624A0A1W2PR95 340 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 ESYT2A0FGR8 921 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 STXBP3O00186 592 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 PEX10O60683 326 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 TRPA1O75762 1119 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 ANP32AP39687 249 aaKnown RBP11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 CCNA1P78396 465 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 AKAP17AQ02040 695 aaKnown RBP11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 Q3C1V9 767 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 CPXCR1Q8N123 301 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 RGS22Q8NE09 1264 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 CHST13Q8NET6 341 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 TMC2Q8TDI7 906 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 WASF1Q92558 559 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 SHISA4Q96DD7 197 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms