RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 FAAP100Q0VG06 881 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 CCDC96Q2M329 555 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 CCDC174Q6PII3 467 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 CHD1LQ86WJ1 897 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 PLEKHM2Q8IWE5 1019 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 SLC17A8Q8NDX2 589 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 MORC4Q8TE76 937 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 GLT1D1Q96MS3 346 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 TTC14Q96N46 770 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 TMEM39AQ9NV64 488 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 CYP39A1Q9NYL5 469 aa14.7□□□□□ -0.06
SOX2-OT-247ENST00000628347 ASTN1O14525 1302 aa14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 LOC102724159A0A0B4J2E5 919 aa14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 ASGR1P07306 291 aa14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 RAG1P15918 1043 aa14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 SDSP20132 328 aa14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 SNAP25P60880 206 aa14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 SMAD3P84022 425 aaKnown RBP14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 NUCB1Q02818 461 aa14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 PWP2Q15269 919 aaKnown RBP14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 MUM1L1Q5H9M0 696 aa14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 AKNAD1Q5T1N1 836 aa14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 SYDE2Q5VT97 1194 aa14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 CHMP4CQ96CF2 233 aa14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 TOMM22Q9NS69 142 aa14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 TBX21Q9UL17 535 aa14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 CCPG1Q9ULG6 757 aa14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 GNEQ9Y223 722 aaKnown RBP14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 LAMA4Q16363 1823 aa14.69□□□□□ -0.06
SOX2-OT-247ENST00000628347 A0A0U1RQG5 324 aaPredicted RBP14.68□□□□□ -0.06
SOX2-OT-247ENST00000628347 SNHG28P0DPA3 235 aa14.68□□□□□ -0.06
SOX2-OT-247ENST00000628347 IRX5P78411 483 aaPredicted RBP14.68□□□□□ -0.06
SOX2-OT-247ENST00000628347 TNFAIP2Q03169 654 aa14.68□□□□□ -0.06
SOX2-OT-247ENST00000628347 RRP12Q5JTH9 1297 aaKnown RBP14.68□□□□□ -0.06
SOX2-OT-247ENST00000628347 GNASQ5JWF2 1037 aa14.68□□□□□ -0.06
SOX2-OT-247ENST00000628347 TTBK2Q6IQ55 1244 aa14.68□□□□□ -0.06
SOX2-OT-247ENST00000628347 MFSD6Q6ZSS7 791 aa14.68□□□□□ -0.06
SOX2-OT-247ENST00000628347 RILPL2Q969X0 211 aa14.68□□□□□ -0.06
SOX2-OT-247ENST00000628347 GUCD1Q96NT3 240 aa14.68□□□□□ -0.06
SOX2-OT-247ENST00000628347 RNF41Q9H4P4 317 aaPredicted RBP14.68□□□□□ -0.06
SOX2-OT-247ENST00000628347 PNMA2Q9UL42 364 aa14.68□□□□□ -0.06
SOX2-OT-247ENST00000628347 Q9Y3F1 56 aa14.68□□□□□ -0.06
SOX2-OT-247ENST00000628347 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 ARVCFO00192 962 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 TIMP1P01033 207 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 IGHDP01880 384 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 PDHBP11177 359 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 HAND2P61296 217 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 FPGSQ05932 587 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 ZNF697Q5TEC3 545 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 IQSEC1Q6DN90 963 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 B4GALNT3Q6L9W6 998 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 TAPT1Q6NXT6 567 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 TBC1D10CQ8IV04 446 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 SLC43A3Q8NBI5 491 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 SEZ6LQ9BYH1 1024 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 VTA1Q9NP79 307 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 MTMR7Q9Y216 660 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 A0A0C4DFX4 3053 aa14.67□□□□□ -0.06
SOX2-OT-247ENST00000628347 WDR19Q8NEZ3 1342 aa14.66□□□□□ -0.06
SOX2-OT-247ENST00000628347 HIP1O00291 1037 aa14.66□□□□□ -0.06
SOX2-OT-247ENST00000628347 CABYRO75952 493 aa14.66□□□□□ -0.06
SOX2-OT-247ENST00000628347 SLC16A2P36021 539 aa14.66□□□□□ -0.06
SOX2-OT-247ENST00000628347 EPHB4P54760 987 aa14.66□□□□□ -0.06
SOX2-OT-247ENST00000628347 ZNF543Q08ER8 600 aa14.66□□□□□ -0.06
SOX2-OT-247ENST00000628347 MFSD5Q6N075 450 aa14.66□□□□□ -0.06
SOX2-OT-247ENST00000628347 NSMFQ6X4W1 530 aa14.66□□□□□ -0.06
SOX2-OT-247ENST00000628347 TLK2Q86UE8 772 aa14.66□□□□□ -0.06
SOX2-OT-247ENST00000628347 ESR2Q92731 530 aa14.66□□□□□ -0.06
SOX2-OT-247ENST00000628347 ADD3Q9UEY8 706 aaKnown RBP14.66□□□□□ -0.06
SOX2-OT-247ENST00000628347 FRMPD2Q68DX3 1309 aaPredicted RBP14.66□□□□□ -0.06
SOX2-OT-247ENST00000628347 TMEM265A0A087WTH1 108 aa14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 ZNF213O14771 459 aa14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 TLR3O15455 904 aaKnown RBP14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 CD4P01730 458 aa14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 SMPD1P17405 629 aa14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 BAATQ14032 418 aaPredicted RBP14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 CCDC178Q5BJE1 867 aa14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 GPATCH4Q5T3I0 446 aaKnown RBP14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 DGKHQ86XP1 1220 aa14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 FBXO16Q8IX29 292 aaPredicted RBP14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 FAM126BQ8IXS8 530 aa14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 EXOC6Q8TAG9 804 aa14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 RNPC3Q96LT9 517 aaKnown RBP14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 MAF1Q9H063 256 aa14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 AP5M1Q9H0R1 490 aa14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 GPCPD1Q9NPB8 672 aa14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 CDH23Q9H251 3354 aa14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 NEDD4P46934 1319 aa14.65□□□□□ -0.06
SOX2-OT-247ENST00000628347 RBM47A0AV96 593 aaKnown RBP14.64□□□□□ -0.07
SOX2-OT-247ENST00000628347 NFIBO00712 420 aa14.64□□□□□ -0.07
SOX2-OT-247ENST00000628347 ZEB2O60315 1214 aa14.64□□□□□ -0.07
SOX2-OT-247ENST00000628347 ALDH5A1P51649 535 aaPredicted RBP14.64□□□□□ -0.07
SOX2-OT-247ENST00000628347 BEX3Q00994 111 aa14.64□□□□□ -0.07
SOX2-OT-247ENST00000628347 FSCN1Q16658 493 aaKnown RBP14.64□□□□□ -0.07
SOX2-OT-247ENST00000628347 NOL8Q76FK4 1167 aaKnown RBP14.64□□□□□ -0.07
SOX2-OT-247ENST00000628347 CLEC4DQ8WXI8 215 aa14.64□□□□□ -0.07
SOX2-OT-247ENST00000628347 ANKS1AQ92625 1134 aa14.64□□□□□ -0.07
SOX2-OT-247ENST00000628347 VTI1AQ96AJ9 217 aa14.64□□□□□ -0.07
SOX2-OT-247ENST00000628347 YTHDC1Q96MU7 727 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms