RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 ZBED4O75132 1171 aa22.08■■□□□ 1.13
CNOT9-209ENST00000627282 PRPF40AO75400 957 aaKnown RBP22.08■■□□□ 1.13
CNOT9-209ENST00000627282 FDX1P10109 184 aa22.08■■□□□ 1.13
CNOT9-209ENST00000627282 FUT2Q10981 343 aa22.08■■□□□ 1.13
CNOT9-209ENST00000627282 SCRN1Q12765 414 aa22.08■■□□□ 1.13
CNOT9-209ENST00000627282 GPRC5AQ8NFJ5 357 aa22.08■■□□□ 1.13
CNOT9-209ENST00000627282 RAET1EQ8TD07 263 aa22.08■■□□□ 1.13
CNOT9-209ENST00000627282 MTMR8Q96EF0 704 aa22.08■■□□□ 1.13
CNOT9-209ENST00000627282 ZNF333Q96JL9 665 aa22.08■■□□□ 1.13
CNOT9-209ENST00000627282 SPZ1Q9BXG8 430 aa22.08■■□□□ 1.13
CNOT9-209ENST00000627282 ZNF536O15090 1300 aa22.08■■□□□ 1.12
CNOT9-209ENST00000627282 DHX16O60231 1041 aaKnown RBP22.07■■□□□ 1.12
CNOT9-209ENST00000627282 PPP2R5BQ15173 497 aa22.07■■□□□ 1.12
CNOT9-209ENST00000627282 LARP1BQ659C4 914 aaKnown RBP22.07■■□□□ 1.12
CNOT9-209ENST00000627282 CHAMP1Q96JM3 812 aa22.07■■□□□ 1.12
CNOT9-209ENST00000627282 LZTS2Q9BRK4 669 aa22.07■■□□□ 1.12
CNOT9-209ENST00000627282 SPATC1LQ9H0A9 340 aa22.07■■□□□ 1.12
CNOT9-209ENST00000627282 RAVER2Q9HCJ3 691 aaKnown RBP22.07■■□□□ 1.12
CNOT9-209ENST00000627282 ATP6V1DQ9Y5K8 247 aa22.07■■□□□ 1.12
CNOT9-209ENST00000627282 DDX49Q9Y6V7 483 aaKnown RBP22.07■■□□□ 1.12
CNOT9-209ENST00000627282 ATP2A1O14983 1001 aa22.06■■□□□ 1.12
CNOT9-209ENST00000627282 SMARCA1P28370 1054 aa22.06■■□□□ 1.12
CNOT9-209ENST00000627282 CDC37Q16543 378 aaPredicted RBP22.06■■□□□ 1.12
CNOT9-209ENST00000627282 CCDC174Q6PII3 467 aa22.06■■□□□ 1.12
CNOT9-209ENST00000627282 CPXCR1Q8N123 301 aa22.06■■□□□ 1.12
CNOT9-209ENST00000627282 CCDC82Q8N4S0 544 aa22.06■■□□□ 1.12
CNOT9-209ENST00000627282 SMARCC2Q8TAQ2 1214 aa22.06■■□□□ 1.12
CNOT9-209ENST00000627282 SH3TC2Q8TF17 1288 aa22.06■■□□□ 1.12
CNOT9-209ENST00000627282 COA7Q96BR5 231 aa22.06■■□□□ 1.12
CNOT9-209ENST00000627282 GZF1Q9H116 711 aaPredicted RBP22.06■■□□□ 1.12
CNOT9-209ENST00000627282 GABRQQ9UN88 632 aa22.06■■□□□ 1.12
CNOT9-209ENST00000627282 SMCHD1A6NHR9 2005 aa22.06■■□□□ 1.12
CNOT9-209ENST00000627282 TAL1P17542 331 aaPredicted RBP22.06■■□□□ 1.12
CNOT9-209ENST00000627282 PLS1Q14651 629 aa22.06■■□□□ 1.12
CNOT9-209ENST00000627282 NTRK3Q16288 839 aa22.06■■□□□ 1.12
CNOT9-209ENST00000627282 MOV10L1Q9BXT6 1211 aaKnown RBP22.06■■□□□ 1.12
CNOT9-209ENST00000627282 PORCNQ9H237 461 aa22.06■■□□□ 1.12
CNOT9-209ENST00000627282 CNTNAP5Q8WYK1 1306 aa22.05■■□□□ 1.12
CNOT9-209ENST00000627282 CCDC196A0A1B0GTZ2 297 aa22.05■■□□□ 1.12
CNOT9-209ENST00000627282 DTNBO60941 627 aa22.05■■□□□ 1.12
CNOT9-209ENST00000627282 STAT3P40763 770 aa22.05■■□□□ 1.12
CNOT9-209ENST00000627282 FLT3LGP49771 235 aa22.05■■□□□ 1.12
CNOT9-209ENST00000627282 OAZ1P54368 228 aa22.05■■□□□ 1.12
CNOT9-209ENST00000627282 QRICH1Q2TAL8 776 aa22.05■■□□□ 1.12
CNOT9-209ENST00000627282 AGBL1Q96MI9 1066 aa22.05■■□□□ 1.12
CNOT9-209ENST00000627282 PIGSQ96S52 555 aa22.05■■□□□ 1.12
CNOT9-209ENST00000627282 TEX13BQ9BXU2 312 aa22.05■■□□□ 1.12
CNOT9-209ENST00000627282 CTDP1Q9Y5B0 961 aaPredicted RBP22.05■■□□□ 1.12
CNOT9-209ENST00000627282 GRK4P32298 578 aa22.04■■□□□ 1.12
CNOT9-209ENST00000627282 SNRNP48Q6IEG0 339 aaKnown RBP22.04■■□□□ 1.12
CNOT9-209ENST00000627282 HOMER1Q86YM7 354 aa22.04■■□□□ 1.12
CNOT9-209ENST00000627282 PIBF1Q8WXW3 757 aa22.04■■□□□ 1.12
CNOT9-209ENST00000627282 RIPK3Q9Y572 518 aa22.04■■□□□ 1.12
CNOT9-209ENST00000627282 ZBTB5O15062 677 aa22.03■■□□□ 1.12
CNOT9-209ENST00000627282 JAK2O60674 1132 aa22.03■■□□□ 1.12
CNOT9-209ENST00000627282 PPP1R11O60927 126 aaPredicted RBP22.03■■□□□ 1.12
CNOT9-209ENST00000627282 ICAM1P05362 532 aa22.03■■□□□ 1.12
CNOT9-209ENST00000627282 IRF5Q13568 498 aa22.03■■□□□ 1.12
CNOT9-209ENST00000627282 RIOX2Q8IUF8 465 aa22.03■■□□□ 1.12
CNOT9-209ENST00000627282 NSUN7Q8NE18 718 aaKnown RBP22.03■■□□□ 1.12
CNOT9-209ENST00000627282 KIAA0100Q14667 2235 aaKnown RBP22.03■■□□□ 1.12
CNOT9-209ENST00000627282 hCG_1642624A0A1W2PR95 340 aa22.02■■□□□ 1.12
CNOT9-209ENST00000627282 VPS37CA5D8V6 355 aaPredicted RBP22.02■■□□□ 1.12
CNOT9-209ENST00000627282 TMEM87AQ8NBN3 555 aa22.02■■□□□ 1.12
CNOT9-209ENST00000627282 SLAIN1Q8ND83 568 aa22.02■■□□□ 1.12
CNOT9-209ENST00000627282 DOCK3Q8IZD9 2030 aa22.02■■□□□ 1.12
CNOT9-209ENST00000627282 PPFIA3O75145 1194 aa22.02■■□□□ 1.11
CNOT9-209ENST00000627282 CTDNEP1O95476 244 aa22.02■■□□□ 1.11
CNOT9-209ENST00000627282 IFNAR1P17181 557 aa22.02■■□□□ 1.11
CNOT9-209ENST00000627282 ERCC3P19447 782 aa22.02■■□□□ 1.11
CNOT9-209ENST00000627282 MAPK4P31152 587 aa22.02■■□□□ 1.11
CNOT9-209ENST00000627282 CCNA1P78396 465 aa22.02■■□□□ 1.11
CNOT9-209ENST00000627282 HMGN5P82970 282 aaKnown RBP22.02■■□□□ 1.11
CNOT9-209ENST00000627282 MLLT1Q03111 559 aaPredicted RBP22.02■■□□□ 1.11
CNOT9-209ENST00000627282 RRP36Q96EU6 259 aaKnown RBP22.02■■□□□ 1.11
CNOT9-209ENST00000627282 CCPG1Q9ULG6 757 aa22.02■■□□□ 1.11
CNOT9-209ENST00000627282 PNMA6FA0A0J9YX94 578 aa22.01■■□□□ 1.11
CNOT9-209ENST00000627282 ADCY3O60266 1144 aa22.01■■□□□ 1.11
CNOT9-209ENST00000627282 MYH6P13533 1939 aa22.01■■□□□ 1.11
CNOT9-209ENST00000627282 BRCA2P51587 3418 aa22.01■■□□□ 1.11
CNOT9-209ENST00000627282 RBBP6Q7Z6E9 1792 aaKnown RBP22.01■■□□□ 1.11
CNOT9-209ENST00000627282 SHCBP1Q8NEM2 672 aa22.01■■□□□ 1.11
CNOT9-209ENST00000627282 PXYLP1Q8TE99 480 aa22.01■■□□□ 1.11
CNOT9-209ENST00000627282 PHKBQ93100 1093 aa22.01■■□□□ 1.11
CNOT9-209ENST00000627282 GJD2Q9UKL4 321 aa22.01■■□□□ 1.11
CNOT9-209ENST00000627282 SLC25A27O95847 323 aa22■■□□□ 1.11
CNOT9-209ENST00000627282 NCAPG2Q86XI2 1143 aa22■■□□□ 1.11
CNOT9-209ENST00000627282 GPT2Q8TD30 523 aa22■■□□□ 1.11
CNOT9-209ENST00000627282 V9GY48 417 aaPredicted RBP22■■□□□ 1.11
CNOT9-209ENST00000627282 TCHHQ07283 1943 aa22■■□□□ 1.11
CNOT9-209ENST00000627282 POTEFA5A3E0 1075 aa21.99■■□□□ 1.11
CNOT9-209ENST00000627282 CPLX1O14810 134 aa21.99■■□□□ 1.11
CNOT9-209ENST00000627282 MBD3O95983 291 aa21.99■■□□□ 1.11
CNOT9-209ENST00000627282 ALAS1P13196 640 aa21.99■■□□□ 1.11
CNOT9-209ENST00000627282 FOXD4L6Q3SYB3 417 aaPredicted RBP21.99■■□□□ 1.11
CNOT9-209ENST00000627282 USH1GQ495M9 461 aa21.99■■□□□ 1.11
CNOT9-209ENST00000627282 FOXD4L3Q6VB84 417 aaPredicted RBP21.99■■□□□ 1.11
CNOT9-209ENST00000627282 FBXO11Q86XK2 927 aa21.99■■□□□ 1.11
CNOT9-209ENST00000627282 CCAR1Q8IX12 1150 aaKnown RBP21.99■■□□□ 1.11
CNOT9-209ENST00000627282 FAM184AQ8NB25 1140 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms