RNA–Protein interactions for RNA: ENST00000626926.1

CPSF7-226, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5 BASIC

Gene CPSF7, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-226ENST00000626926 ZNF543Q08ER8 600 aa10.37□□□□□ -0.75
CPSF7-226ENST00000626926 FAAP100Q0VG06 881 aa10.37□□□□□ -0.75
CPSF7-226ENST00000626926 KCNA10Q16322 511 aa10.37□□□□□ -0.75
CPSF7-226ENST00000626926 MUM1L1Q5H9M0 696 aa10.37□□□□□ -0.75
CPSF7-226ENST00000626926 SYDE2Q5VT97 1194 aa10.37□□□□□ -0.75
CPSF7-226ENST00000626926 MFSD6Q6ZSS7 791 aa10.37□□□□□ -0.75
CPSF7-226ENST00000626926 ANKS1AQ92625 1134 aa10.37□□□□□ -0.75
CPSF7-226ENST00000626926 BADQ92934 168 aa10.37□□□□□ -0.75
CPSF7-226ENST00000626926 MAF1Q9H063 256 aa10.37□□□□□ -0.75
CPSF7-226ENST00000626926 RNF41Q9H4P4 317 aaPredicted RBP10.37□□□□□ -0.75
CPSF7-226ENST00000626926 PRDM5Q9NQX1 630 aaPredicted RBP10.37□□□□□ -0.75
CPSF7-226ENST00000626926 Q9Y3F1 56 aa10.37□□□□□ -0.75
CPSF7-226ENST00000626926 NEDD4P46934 1319 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 EYSQ5T1H1 3165 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 TRIM6-TRIM34B2RNG4 842 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 HIP1O00291 1037 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 MYCNP04198 464 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-226ENST00000626926 ASGR1P07306 291 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 C6orf222P0C671 652 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-226ENST00000626926 ALAS1P13196 640 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 SMAD3P84022 425 aaKnown RBP10.36□□□□□ -0.75
CPSF7-226ENST00000626926 IKQ13123 557 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-226ENST00000626926 SHHQ15465 462 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 C9orf50Q5SZB4 431 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 TTBK2Q6IQ55 1244 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 Q7L0L9 218 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 DGKHQ86XP1 1220 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 SLC43A3Q8NBI5 491 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 EXOC6Q8TAG9 804 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 GLT1D1Q96MS3 346 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 DSCC1Q9BVC3 393 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 SEZ6LQ9BYH1 1024 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 SPC25Q9HBM1 224 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 VTA1Q9NP79 307 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 CCPG1Q9ULG6 757 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 KIAA1217Q5T5P2 1943 aa10.36□□□□□ -0.75
CPSF7-226ENST00000626926 TMEM265A0A087WTH1 108 aa10.35□□□□□ -0.75
CPSF7-226ENST00000626926 A0A0U1RQG5 324 aaPredicted RBP10.35□□□□□ -0.75
CPSF7-226ENST00000626926 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.35□□□□□ -0.75
CPSF7-226ENST00000626926 DCDC2CA8MYV0 355 aa10.35□□□□□ -0.75
CPSF7-226ENST00000626926 NFIBO00712 420 aa10.35□□□□□ -0.75
CPSF7-226ENST00000626926 PQBP1O60828 265 aaKnown RBP10.35□□□□□ -0.75
CPSF7-226ENST00000626926 CABYRO75952 493 aa10.35□□□□□ -0.75
CPSF7-226ENST00000626926 EDNRBP24530 442 aa10.35□□□□□ -0.75
CPSF7-226ENST00000626926 SLC4A3P48751 1232 aa10.35□□□□□ -0.75
CPSF7-226ENST00000626926 HAND2P61296 217 aa10.35□□□□□ -0.75
CPSF7-226ENST00000626926 IRX5P78411 483 aaPredicted RBP10.35□□□□□ -0.75
CPSF7-226ENST00000626926 TNFAIP2Q03169 654 aa10.35□□□□□ -0.75
CPSF7-226ENST00000626926 CCDC96Q2M329 555 aa10.35□□□□□ -0.75
CPSF7-226ENST00000626926 GPATCH4Q5T3I0 446 aaKnown RBP10.35□□□□□ -0.75
CPSF7-226ENST00000626926 TAPT1Q6NXT6 567 aa10.35□□□□□ -0.75
CPSF7-226ENST00000626926 CCDC174Q6PII3 467 aa10.35□□□□□ -0.75
CPSF7-226ENST00000626926 FAM126BQ8IXS8 530 aa10.35□□□□□ -0.75
CPSF7-226ENST00000626926 CLEC4DQ8WXI8 215 aa10.35□□□□□ -0.75
CPSF7-226ENST00000626926 ESR2Q92731 530 aa10.35□□□□□ -0.75
CPSF7-226ENST00000626926 GUCD1Q96NT3 240 aa10.35□□□□□ -0.75
CPSF7-226ENST00000626926 ADD3Q9UEY8 706 aaKnown RBP10.35□□□□□ -0.75
CPSF7-226ENST00000626926 TANC1Q9C0D5 1861 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 CHD9Q3L8U1 2897 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 RBM47A0AV96 593 aaKnown RBP10.34□□□□□ -0.75
CPSF7-226ENST00000626926 ARVCFO00192 962 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 TIMP1P01033 207 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 CD4P01730 458 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 RAG1P15918 1043 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 SMPD1P17405 629 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 SLC16A2P36021 539 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 EPHB4P54760 987 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 FPGSQ05932 587 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 DUSP28Q4G0W2 176 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 CCDC178Q5BJE1 867 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 RRP12Q5JTH9 1297 aaKnown RBP10.34□□□□□ -0.75
CPSF7-226ENST00000626926 GNASQ5JWF2 1037 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 RASIP1Q5U651 963 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 IQSEC1Q6DN90 963 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 B4GALNT3Q6L9W6 998 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 TLK2Q86UE8 772 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 RGS22Q8NE09 1264 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 RILPL2Q969X0 211 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 TOMM22Q9NS69 142 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 DIAPH3Q9NSV4 1193 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 TMEM39AQ9NV64 488 aa10.34□□□□□ -0.75
CPSF7-226ENST00000626926 ISY1Q9ULR0 285 aaKnown RBP10.34□□□□□ -0.75
CPSF7-226ENST00000626926 RAD50Q92878 1312 aa10.33□□□□□ -0.76
CPSF7-226ENST00000626926 ZNF213O14771 459 aa10.33□□□□□ -0.76
CPSF7-226ENST00000626926 ALDH5A1P51649 535 aaPredicted RBP10.33□□□□□ -0.76
CPSF7-226ENST00000626926 SNAP25P60880 206 aa10.33□□□□□ -0.76
CPSF7-226ENST00000626926 BAATQ14032 418 aaPredicted RBP10.33□□□□□ -0.76
CPSF7-226ENST00000626926 FSCN1Q16658 493 aaKnown RBP10.33□□□□□ -0.76
CPSF7-226ENST00000626926 MFSD5Q6N075 450 aa10.33□□□□□ -0.76
CPSF7-226ENST00000626926 CWC27Q6UX04 472 aaKnown RBP10.33□□□□□ -0.76
CPSF7-226ENST00000626926 NSMFQ6X4W1 530 aa10.33□□□□□ -0.76
CPSF7-226ENST00000626926 IQCA1Q86XH1 822 aa10.33□□□□□ -0.76
CPSF7-226ENST00000626926 FBXO16Q8IX29 292 aaPredicted RBP10.33□□□□□ -0.76
CPSF7-226ENST00000626926 DNERQ8NFT8 737 aa10.33□□□□□ -0.76
CPSF7-226ENST00000626926 IL25Q9H293 177 aa10.33□□□□□ -0.76
CPSF7-226ENST00000626926 GRIN2DO15399 1336 aa10.33□□□□□ -0.76
CPSF7-226ENST00000626926 FRMPD2Q68DX3 1309 aaPredicted RBP10.33□□□□□ -0.76
CPSF7-226ENST00000626926 GBF1Q92538 1859 aa10.32□□□□□ -0.76
CPSF7-226ENST00000626926 PRUNE2Q8WUY3 3088 aa10.32□□□□□ -0.76
CPSF7-226ENST00000626926 KDM4AO75164 1064 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms