RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 SEPT4O43236 478 aa19.49■□□□□ 0.71
UBE3D-208ENST00000626828 FARP2O94887 1054 aaPredicted RBP19.49■□□□□ 0.71
UBE3D-208ENST00000626828 EXOSC10Q01780 885 aaKnown RBP19.49■□□□□ 0.71
UBE3D-208ENST00000626828 CNTN2Q02246 1040 aa19.49■□□□□ 0.71
UBE3D-208ENST00000626828 CDC37Q16543 378 aaPredicted RBP19.49■□□□□ 0.71
UBE3D-208ENST00000626828 UBE2Q1Q7Z7E8 422 aa19.49■□□□□ 0.71
UBE3D-208ENST00000626828 RGS22Q8NE09 1264 aa19.49■□□□□ 0.71
UBE3D-208ENST00000626828 NUP133Q8WUM0 1156 aa19.49■□□□□ 0.71
UBE3D-208ENST00000626828 GPHNQ9NQX3 736 aaPredicted RBP19.49■□□□□ 0.71
UBE3D-208ENST00000626828 ASB14A6NK59 587 aa19.48■□□□□ 0.71
UBE3D-208ENST00000626828 DDAH1O94760 285 aa19.48■□□□□ 0.71
UBE3D-208ENST00000626828 CALM1P0DP23 149 aa19.48■□□□□ 0.71
UBE3D-208ENST00000626828 CALM2P0DP24 149 aa19.48■□□□□ 0.71
UBE3D-208ENST00000626828 CALM3P0DP25 149 aa19.48■□□□□ 0.71
UBE3D-208ENST00000626828 KIF5BP33176 963 aa19.48■□□□□ 0.71
UBE3D-208ENST00000626828 BAATQ14032 418 aaPredicted RBP19.48■□□□□ 0.71
UBE3D-208ENST00000626828 QRICH1Q2TAL8 776 aa19.48■□□□□ 0.71
UBE3D-208ENST00000626828 FBXO11Q86XK2 927 aa19.48■□□□□ 0.71
UBE3D-208ENST00000626828 ZNF654Q8IZM8 581 aa19.48■□□□□ 0.71
UBE3D-208ENST00000626828 CTCFLQ8NI51 663 aaPredicted RBP19.48■□□□□ 0.71
UBE3D-208ENST00000626828 CLEC4DQ8WXI8 215 aa19.48■□□□□ 0.71
UBE3D-208ENST00000626828 RIOX1Q9H6W3 641 aa19.48■□□□□ 0.71
UBE3D-208ENST00000626828 MYH6P13533 1939 aa19.47■□□□□ 0.71
UBE3D-208ENST00000626828 SNAI1O95863 264 aaPredicted RBP19.47■□□□□ 0.71
UBE3D-208ENST00000626828 SMARCA1P28370 1054 aa19.47■□□□□ 0.71
UBE3D-208ENST00000626828 GNAQP50148 359 aa19.47■□□□□ 0.71
UBE3D-208ENST00000626828 TRAF1Q13077 416 aa19.47■□□□□ 0.71
UBE3D-208ENST00000626828 ADCK5Q3MIX3 580 aa19.47■□□□□ 0.71
UBE3D-208ENST00000626828 SYNE3Q6ZMZ3 975 aa19.47■□□□□ 0.71
UBE3D-208ENST00000626828 NECAB2Q7Z6G3 386 aa19.47■□□□□ 0.71
UBE3D-208ENST00000626828 MTMR8Q96EF0 704 aa19.47■□□□□ 0.71
UBE3D-208ENST00000626828 PAWRQ96IZ0 340 aaKnown RBP19.47■□□□□ 0.71
UBE3D-208ENST00000626828 LZTS2Q9BRK4 669 aa19.47■□□□□ 0.71
UBE3D-208ENST00000626828 HTATIP2Q9BUP3 242 aa19.47■□□□□ 0.71
UBE3D-208ENST00000626828 AMNQ9BXJ7 453 aa19.47■□□□□ 0.71
UBE3D-208ENST00000626828 ABHD16BQ9H3Z7 469 aa19.47■□□□□ 0.71
UBE3D-208ENST00000626828 ADD3Q9UEY8 706 aaKnown RBP19.47■□□□□ 0.71
UBE3D-208ENST00000626828 MRPL11Q9Y3B7 192 aaKnown RBP19.47■□□□□ 0.71
UBE3D-208ENST00000626828 SLC12A7Q9Y666 1083 aa19.47■□□□□ 0.71
UBE3D-208ENST00000626828 ABCB11O95342 1321 aa19.47■□□□□ 0.71
UBE3D-208ENST00000626828 PTPDC1A2A3K4 754 aa19.46■□□□□ 0.71
UBE3D-208ENST00000626828 SOWAHBA6NEL2 793 aa19.46■□□□□ 0.71
UBE3D-208ENST00000626828 NFIBO00712 420 aa19.46■□□□□ 0.71
UBE3D-208ENST00000626828 ZBTB5O15062 677 aa19.46■□□□□ 0.71
UBE3D-208ENST00000626828 COL9A3Q14050 684 aaPredicted RBP19.46■□□□□ 0.71
UBE3D-208ENST00000626828 USH1GQ495M9 461 aa19.46■□□□□ 0.71
UBE3D-208ENST00000626828 RNF207Q6ZRF8 634 aa19.46■□□□□ 0.71
UBE3D-208ENST00000626828 SGMS1Q86VZ5 419 aa19.46■□□□□ 0.71
UBE3D-208ENST00000626828 ARRDC4Q8NCT1 418 aa19.46■□□□□ 0.71
UBE3D-208ENST00000626828 FGD4Q96M96 766 aa19.46■□□□□ 0.71
UBE3D-208ENST00000626828 USP26Q9BXU7 913 aa19.46■□□□□ 0.71
UBE3D-208ENST00000626828 LRRC2Q9BYS8 371 aa19.46■□□□□ 0.71
UBE3D-208ENST00000626828 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.46■□□□□ 0.71
UBE3D-208ENST00000626828 FAM184BQ9ULE4 1060 aa19.46■□□□□ 0.71
UBE3D-208ENST00000626828 SNX14Q9Y5W7 946 aa19.46■□□□□ 0.71
UBE3D-208ENST00000626828 LOC102724159A0A0B4J2E5 919 aa19.45■□□□□ 0.7
UBE3D-208ENST00000626828 ZNF865P0CJ78 1059 aaPredicted RBP19.45■□□□□ 0.7
UBE3D-208ENST00000626828 TAL1P17542 331 aaPredicted RBP19.45■□□□□ 0.7
UBE3D-208ENST00000626828 PSMA5P28066 241 aa19.45■□□□□ 0.7
UBE3D-208ENST00000626828 ACVR2BQ13705 512 aa19.45■□□□□ 0.7
UBE3D-208ENST00000626828 PWP2Q15269 919 aaKnown RBP19.45■□□□□ 0.7
UBE3D-208ENST00000626828 ARMCX2Q7L311 632 aa19.45■□□□□ 0.7
UBE3D-208ENST00000626828 MCF2L2Q86YR7 1114 aa19.45■□□□□ 0.7
UBE3D-208ENST00000626828 CCDC144CPQ8IYA2 1237 aa19.45■□□□□ 0.7
UBE3D-208ENST00000626828 MCM3APO60318 1980 aa19.44■□□□□ 0.7
UBE3D-208ENST00000626828 PNMA6FA0A0J9YX94 578 aa19.44■□□□□ 0.7
UBE3D-208ENST00000626828 EIF5BO60841 1220 aaKnown RBP19.44■□□□□ 0.7
UBE3D-208ENST00000626828 RPS6P62753 249 aaKnown RBP19.44■□□□□ 0.7
UBE3D-208ENST00000626828 BRCA2P51587 3418 aa19.43■□□□□ 0.7
UBE3D-208ENST00000626828 B4DLN1 442 aa19.43■□□□□ 0.7
UBE3D-208ENST00000626828 RARBP10826 455 aa19.43■□□□□ 0.7
UBE3D-208ENST00000626828 AKR1A1P14550 325 aa19.43■□□□□ 0.7
UBE3D-208ENST00000626828 CALML3P27482 149 aa19.43■□□□□ 0.7
UBE3D-208ENST00000626828 MNX1P50219 401 aaPredicted RBP19.43■□□□□ 0.7
UBE3D-208ENST00000626828 MRPL12P52815 198 aaKnown RBP19.43■□□□□ 0.7
UBE3D-208ENST00000626828 BLOC1S2Q6QNY1 142 aa19.43■□□□□ 0.7
UBE3D-208ENST00000626828 FANCBQ8NB91 859 aa19.43■□□□□ 0.7
UBE3D-208ENST00000626828 DPF3Q92784 378 aa19.43■□□□□ 0.7
UBE3D-208ENST00000626828 JAKMIP1Q96N16 626 aaKnown RBP19.43■□□□□ 0.7
UBE3D-208ENST00000626828 PIGSQ96S52 555 aa19.43■□□□□ 0.7
UBE3D-208ENST00000626828 MYL10Q9BUA6 226 aa19.43■□□□□ 0.7
UBE3D-208ENST00000626828 C11orf49Q9H6J7 331 aa19.43■□□□□ 0.7
UBE3D-208ENST00000626828 PCDHA1Q9Y5I3 950 aa19.43■□□□□ 0.7
UBE3D-208ENST00000626828 CYTH3O43739 400 aa19.42■□□□□ 0.7
UBE3D-208ENST00000626828 FGD1P98174 961 aa19.42■□□□□ 0.7
UBE3D-208ENST00000626828 SLC35G1Q2M3R5 365 aa19.42■□□□□ 0.7
UBE3D-208ENST00000626828 ANO1Q5XXA6 986 aa19.42■□□□□ 0.7
UBE3D-208ENST00000626828 HOMER1Q86YM7 354 aa19.42■□□□□ 0.7
UBE3D-208ENST00000626828 SAMD3Q8N6K7 520 aa19.42■□□□□ 0.7
UBE3D-208ENST00000626828 DNERQ8NFT8 737 aa19.42■□□□□ 0.7
UBE3D-208ENST00000626828 MORC4Q8TE76 937 aa19.42■□□□□ 0.7
UBE3D-208ENST00000626828 DIS3LQ8TF46 1054 aaKnown RBP19.42■□□□□ 0.7
UBE3D-208ENST00000626828 TCEANC2Q96MN5 208 aa19.42■□□□□ 0.7
UBE3D-208ENST00000626828 MPHOSPH6Q99547 160 aaKnown RBP19.42■□□□□ 0.7
UBE3D-208ENST00000626828 SPZ1Q9BXG8 430 aa19.42■□□□□ 0.7
UBE3D-208ENST00000626828 MAP3K20Q9NYL2 800 aaKnown RBP19.42■□□□□ 0.7
UBE3D-208ENST00000626828 ZHX1Q9UKY1 873 aaPredicted RBP19.42■□□□□ 0.7
UBE3D-208ENST00000626828 TNRC18O15417 2968 aaPredicted RBP19.41■□□□□ 0.7
UBE3D-208ENST00000626828 CEP290O15078 2479 aa19.41■□□□□ 0.7
UBE3D-208ENST00000626828 TBC1D5Q92609 795 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms