RNA–Protein interactions for RNA: ENST00000626802.2

SOX2-OT-240, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 737 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-240ENST00000626802 SEMA6BQ9H3T3 888 aa14.33□□□□□ -0.12
SOX2-OT-240ENST00000626802 VCANP13611 3396 aa14.33□□□□□ -0.12
SOX2-OT-240ENST00000626802 BAZ2BQ9UIF8 2168 aaKnown RBP14.33□□□□□ -0.12
SOX2-OT-240ENST00000626802 CUL9Q8IWT3 2517 aa14.33□□□□□ -0.12
SOX2-OT-240ENST00000626802 DCDC2CA8MYV0 355 aa14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 SLC16A2P36021 539 aa14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 HAND2P61296 217 aa14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 SMAD3P84022 425 aaKnown RBP14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 RRP12Q5JTH9 1297 aaKnown RBP14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 GNASQ5JWF2 1037 aa14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 RCSD1Q6JBY9 416 aa14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 EEPD1Q7L9B9 569 aa14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 FBXO16Q8IX29 292 aaPredicted RBP14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 EVI5LQ96CN4 794 aa14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 TOX2Q96NM4 488 aa14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 PPP1R12CQ9BZL4 782 aa14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 PDGFCQ9NRA1 345 aa14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 TOMM22Q9NS69 142 aa14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 ANAPC4Q9UJX5 808 aa14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 FRMPD2Q68DX3 1309 aaPredicted RBP14.32□□□□□ -0.12
SOX2-OT-240ENST00000626802 ORC4O43929 436 aa14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 FDX1P10109 184 aa14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 CDK7P50613 346 aa14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 TNFAIP2Q03169 654 aa14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 NMIQ13287 307 aaPredicted RBP14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 NSMFQ6X4W1 530 aa14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 FAM126BQ8IXS8 530 aa14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 PCSK9Q8NBP7 692 aaKnown RBP14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 VTI1AQ96AJ9 217 aa14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 LNPKQ9C0E8 428 aa14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 CYP39A1Q9NYL5 469 aa14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 CCPG1Q9ULG6 757 aa14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 ELP1O95163 1332 aa14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 TCF20Q9UGU0 1960 aaKnown RBP14.31□□□□□ -0.12
SOX2-OT-240ENST00000626802 COL4A4P53420 1690 aaPredicted RBP14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 A0A0U1RQG5 324 aaPredicted RBP14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 ARVCFO00192 962 aa14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 PLA2G6O60733 806 aa14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 TIMP1P01033 207 aa14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 FGAP02671 866 aa14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 SMPD1P17405 629 aa14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 NOVP48745 357 aa14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 TKFCQ3LXA3 575 aa14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 CXCL17Q6UXB2 119 aa14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 NOL8Q76FK4 1167 aaKnown RBP14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 TLK2Q86UE8 772 aa14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 COL25A1Q9BXS0 654 aaPredicted RBP14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 RANBP17Q9H2T7 1088 aaKnown RBP14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 SPC25Q9HBM1 224 aa14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 GPCPD1Q9NPB8 672 aa14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 HELLSQ9NRZ9 838 aa14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 ZBTB47Q9UFB7 747 aaPredicted RBP14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 GNEQ9Y223 722 aaKnown RBP14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 MROH7Q68CQ1 1323 aa14.3□□□□□ -0.12
SOX2-OT-240ENST00000626802 NFIBO00712 420 aa14.29□□□□□ -0.12
SOX2-OT-240ENST00000626802 FGRP09769 529 aa14.29□□□□□ -0.12
SOX2-OT-240ENST00000626802 ACRP10323 421 aa14.29□□□□□ -0.12
SOX2-OT-240ENST00000626802 HSPD1P10809 573 aaKnown RBP14.29□□□□□ -0.12
SOX2-OT-240ENST00000626802 CSF2RAP15509 400 aa14.29□□□□□ -0.12
SOX2-OT-240ENST00000626802 HDAC1Q13547 482 aaPredicted RBP14.29□□□□□ -0.12
SOX2-OT-240ENST00000626802 ALX1Q15699 326 aa14.29□□□□□ -0.12
SOX2-OT-240ENST00000626802 TAPT1Q6NXT6 567 aa14.29□□□□□ -0.12
SOX2-OT-240ENST00000626802 C16orf59Q7L2K0 433 aa14.29□□□□□ -0.12
SOX2-OT-240ENST00000626802 TBC1D10CQ8IV04 446 aa14.29□□□□□ -0.12
SOX2-OT-240ENST00000626802 MAFAQ8NHW3 353 aaPredicted RBP14.29□□□□□ -0.12
SOX2-OT-240ENST00000626802 DCAF4Q8WV16 495 aa14.29□□□□□ -0.12
SOX2-OT-240ENST00000626802 TMEM47Q9BQJ4 181 aa14.29□□□□□ -0.12
SOX2-OT-240ENST00000626802 UMODL1Q5DID0 1318 aa14.29□□□□□ -0.12
SOX2-OT-240ENST00000626802 ASB14A6NK59 587 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 GRXCR1A8MXD5 290 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 GRIN2DO15399 1336 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 REV3LO60673 3130 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 ICAM1P05362 532 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 DNAJB2P25686 324 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 CYP2C18P33260 490 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 NEDD4P46934 1319 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 PSMC6P62333 389 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 NKX3-2P78367 333 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 MCMDC2Q4G0Z9 681 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 PPP4R3BQ5MIZ7 849 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 TMEM240Q5SV17 173 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 SYDE2Q5VT97 1194 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 MFSD5Q6N075 450 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 CCDC171Q6TFL3 1326 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 SLC30A10Q6XR72 485 aa14.28□□□□□ -0.12
SOX2-OT-240ENST00000626802 ZMYM6O95789 1325 aa14.27□□□□□ -0.12
SOX2-OT-240ENST00000626802 TRIM6-TRIM34B2RNG4 842 aa14.27□□□□□ -0.13
SOX2-OT-240ENST00000626802 DYNC1LI2O43237 492 aaPredicted RBP14.27□□□□□ -0.13
SOX2-OT-240ENST00000626802 CD4P01730 458 aa14.27□□□□□ -0.13
SOX2-OT-240ENST00000626802 PDHBP11177 359 aa14.27□□□□□ -0.13
SOX2-OT-240ENST00000626802 TOP1P11387 765 aaKnown RBP14.27□□□□□ -0.13
SOX2-OT-240ENST00000626802 FOSL2P15408 326 aa14.27□□□□□ -0.13
SOX2-OT-240ENST00000626802 PBX2P40425 430 aa14.27□□□□□ -0.13
SOX2-OT-240ENST00000626802 ALDH5A1P51649 535 aaPredicted RBP14.27□□□□□ -0.13
SOX2-OT-240ENST00000626802 BAATQ14032 418 aaPredicted RBP14.27□□□□□ -0.13
SOX2-OT-240ENST00000626802 FSCN1Q16658 493 aaKnown RBP14.27□□□□□ -0.13
SOX2-OT-240ENST00000626802 B4GALNT3Q6L9W6 998 aa14.27□□□□□ -0.13
SOX2-OT-240ENST00000626802 BTNL9Q6UXG8 535 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms