RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 PPARAQ07869 468 aa13.15□□□□□ -0.3
DDX41-218ENST00000625286 ZMYM1Q5SVZ6 1142 aa13.15□□□□□ -0.3
DDX41-218ENST00000625286 CCDC129Q6ZRS4 1044 aa13.15□□□□□ -0.3
DDX41-218ENST00000625286 KCTD1Q719H9 257 aa13.15□□□□□ -0.3
DDX41-218ENST00000625286 STAG1Q8WVM7 1258 aa13.15□□□□□ -0.3
DDX41-218ENST00000625286 GMCL1Q96IK5 515 aa13.15□□□□□ -0.3
DDX41-218ENST00000625286 TRERF1Q96PN7 1200 aa13.15□□□□□ -0.3
DDX41-218ENST00000625286 ACAD9Q9H845 621 aa13.15□□□□□ -0.3
DDX41-218ENST00000625286 RNF146Q9NTX7 359 aa13.15□□□□□ -0.3
DDX41-218ENST00000625286 LRRC37A2A6NM11 1700 aa13.15□□□□□ -0.3
DDX41-218ENST00000625286 PPIGQ13427 754 aaKnown RBP eCLIP13.14□□□□□ -0.312e-11■■□□□ 13.8
DDX41-218ENST00000625286 CCDC174Q6PII3 467 aa13.14□□□□□ -0.31
DDX41-218ENST00000625286 TRPV6Q9H1D0 765 aa13.14□□□□□ -0.31
DDX41-218ENST00000625286 PRDM12Q9H4Q4 367 aa13.14□□□□□ -0.31
DDX41-218ENST00000625286 CYP39A1Q9NYL5 469 aa13.14□□□□□ -0.31
DDX41-218ENST00000625286 PRR12Q9ULL5 1215 aa13.14□□□□□ -0.31
DDX41-218ENST00000625286 CTDP1Q9Y5B0 961 aaPredicted RBP13.14□□□□□ -0.31
DDX41-218ENST00000625286 MROH7Q68CQ1 1323 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 TRANK1O15050 2925 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 DYNC1LI2O43237 492 aaPredicted RBP13.13□□□□□ -0.31
DDX41-218ENST00000625286 PLA2G6O60733 806 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 ALAS1P13196 640 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 SLC1A4P43007 532 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 NOVP48745 357 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 STAT2P52630 851 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 PSMC6P62333 389 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 TTBK2Q6IQ55 1244 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 RCSD1Q6JBY9 416 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 EEPD1Q7L9B9 569 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 TLK2Q86UE8 772 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 TMEM199Q8N511 208 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 HERVK_113Q902F9 699 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 WNT8AQ9H1J5 351 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 SPC25Q9HBM1 224 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 ZNF287Q9HBT7 754 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 IL23AQ9NPF7 189 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 YBX2Q9Y2T7 364 aaKnown RBP13.13□□□□□ -0.31
DDX41-218ENST00000625286 BDP1A6H8Y1 2624 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 SALL3Q9BXA9 1300 aa13.13□□□□□ -0.31
DDX41-218ENST00000625286 RBAK-RBAKDNI3L0D1 243 aa13.12□□□□□ -0.31
DDX41-218ENST00000625286 B4GALT4O60513 344 aa13.12□□□□□ -0.31
DDX41-218ENST00000625286 FDX1P10109 184 aa13.12□□□□□ -0.31
DDX41-218ENST00000625286 CCL23P55773 120 aa13.12□□□□□ -0.31
DDX41-218ENST00000625286 PDE4BQ07343 736 aa13.12□□□□□ -0.31
DDX41-218ENST00000625286 ITGA7Q13683 1181 aa13.12□□□□□ -0.31
DDX41-218ENST00000625286 FSCN1Q16658 493 aaKnown RBP13.12□□□□□ -0.31
DDX41-218ENST00000625286 FAM160B2Q86V87 743 aa13.12□□□□□ -0.31
DDX41-218ENST00000625286 FBXO16Q8IX29 292 aaPredicted RBP13.12□□□□□ -0.31
DDX41-218ENST00000625286 MORC4Q8TE76 937 aa13.12□□□□□ -0.31
DDX41-218ENST00000625286 CHURC1Q8WUH1 139 aa13.12□□□□□ -0.31
DDX41-218ENST00000625286 PPM1EQ8WY54 764 aa13.12□□□□□ -0.31
DDX41-218ENST00000625286 NOC4LQ9BVI4 516 aaKnown RBP13.12□□□□□ -0.31
DDX41-218ENST00000625286 NAPBQ9H115 298 aa13.12□□□□□ -0.31
DDX41-218ENST00000625286 TTC41PQ6P2S7 1318 aa13.12□□□□□ -0.31
DDX41-218ENST00000625286 ASB14A6NK59 587 aa13.11□□□□□ -0.31
DDX41-218ENST00000625286 MYOGP15173 224 aa13.11□□□□□ -0.31
DDX41-218ENST00000625286 SLC16A2P36021 539 aa13.11□□□□□ -0.31
DDX41-218ENST00000625286 TKFCQ3LXA3 575 aa13.11□□□□□ -0.31
DDX41-218ENST00000625286 IQSEC1Q6DN90 963 aa13.11□□□□□ -0.31
DDX41-218ENST00000625286 NOL8Q76FK4 1167 aaKnown RBP13.11□□□□□ -0.31
DDX41-218ENST00000625286 OTOP2Q7RTS6 562 aa13.11□□□□□ -0.31
DDX41-218ENST00000625286 GPATCH3Q96I76 525 aa13.11□□□□□ -0.31
DDX41-218ENST00000625286 FSD1Q9BTV5 496 aa13.11□□□□□ -0.31
DDX41-218ENST00000625286 NACAP1Q9BZK3 213 aa13.11□□□□□ -0.31
DDX41-218ENST00000625286 NKX2-4Q9H2Z4 354 aa13.11□□□□□ -0.31
DDX41-218ENST00000625286 HIPK3Q9H422 1215 aa13.11□□□□□ -0.31
DDX41-218ENST00000625286 ISY1Q9ULR0 285 aaKnown RBP13.11□□□□□ -0.31
DDX41-218ENST00000625286 STX8Q9UNK0 236 aa13.11□□□□□ -0.31
DDX41-218ENST00000625286 SCN5AQ14524 2016 aa13.1□□□□□ -0.31
DDX41-218ENST00000625286 TLR3O15455 904 aaKnown RBP13.1□□□□□ -0.31
DDX41-218ENST00000625286 FGBP02675 491 aa13.1□□□□□ -0.31
DDX41-218ENST00000625286 FGRP09769 529 aa13.1□□□□□ -0.31
DDX41-218ENST00000625286 RABGGTBP53611 331 aa13.1□□□□□ -0.31
DDX41-218ENST00000625286 IKQ13123 557 aaPredicted RBP13.1□□□□□ -0.31
DDX41-218ENST00000625286 TJAP1Q5JTD0 557 aa13.1□□□□□ -0.31
DDX41-218ENST00000625286 PSRC1Q6PGN9 363 aaPredicted RBP13.1□□□□□ -0.31
DDX41-218ENST00000625286 PPP1R13LQ8WUF5 828 aa13.1□□□□□ -0.31
DDX41-218ENST00000625286 SCLYQ96I15 445 aa13.1□□□□□ -0.31
DDX41-218ENST00000625286 MTMR7Q9Y216 660 aa13.1□□□□□ -0.31
DDX41-218ENST00000625286 TSPY2A6NKD2 308 aa13.09□□□□□ -0.31
DDX41-218ENST00000625286 NFIBO00712 420 aa13.09□□□□□ -0.31
DDX41-218ENST00000625286 CABYRO75952 493 aa13.09□□□□□ -0.31
DDX41-218ENST00000625286 BAATQ14032 418 aaPredicted RBP13.09□□□□□ -0.31
DDX41-218ENST00000625286 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
DDX41-218ENST00000625286 AKNAD1Q5T1N1 836 aa13.09□□□□□ -0.31
DDX41-218ENST00000625286 NSMFQ6X4W1 530 aa13.09□□□□□ -0.31
DDX41-218ENST00000625286 CLEC4DQ8WXI8 215 aa13.09□□□□□ -0.31
DDX41-218ENST00000625286 AP5M1Q9H0R1 490 aa13.09□□□□□ -0.31
DDX41-218ENST00000625286 RANBP17Q9H2T7 1088 aaKnown RBP13.09□□□□□ -0.31
DDX41-218ENST00000625286 TRMT13Q9NUP7 481 aaKnown RBP13.09□□□□□ -0.31
DDX41-218ENST00000625286 ANAPC4Q9UJX5 808 aa13.09□□□□□ -0.31
DDX41-218ENST00000625286 CCPG1Q9ULG6 757 aa13.09□□□□□ -0.31
DDX41-218ENST00000625286 Q9Y3F1 56 aa13.09□□□□□ -0.31
DDX41-218ENST00000625286 TET1Q8NFU7 2136 aa13.09□□□□□ -0.31
DDX41-218ENST00000625286 PRRC2BQ5JSZ5 2229 aaKnown RBP13.08□□□□□ -0.32
DDX41-218ENST00000625286 RBM47A0AV96 593 aaKnown RBP13.08□□□□□ -0.32
DDX41-218ENST00000625286 ERC2O15083 957 aa13.08□□□□□ -0.32
DDX41-218ENST00000625286 ORC4O43929 436 aa13.08□□□□□ -0.32
DDX41-218ENST00000625286 RANBP6O60518 1105 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms