RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.19□□□□□ -0.78
USB1-216ENST00000624720 TARSL2A2RTX5 802 aaKnown RBP10.19□□□□□ -0.78
USB1-216ENST00000624720 PIK3CAP42336 1068 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 POLR2FP61218 127 aaKnown RBP10.19□□□□□ -0.78
USB1-216ENST00000624720 NUGGCQ68CJ6 796 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 ALKBH2Q6NS38 261 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 BARGINQ6ZT62 677 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 TRIM50Q86XT4 487 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 ZNF713Q8N859 430 aaPredicted RBP10.19□□□□□ -0.78
USB1-216ENST00000624720 CNNM3Q8NE01 707 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 PLBD2Q8NHP8 589 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 ZFPM2Q8WW38 1151 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 ATP6V0A1Q93050 837 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 RPS6KC1Q96S38 1066 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 TANGO6Q9C0B7 1094 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 L2HGDHQ9H9P8 463 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 TPCN1Q9ULQ1 816 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 CEP131Q9UPN4 1083 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 FAM208AQ9UK61 1670 aaKnown RBP10.19□□□□□ -0.78
USB1-216ENST00000624720 K7ELQ4 463 aaPredicted RBP10.19□□□□□ -0.78
USB1-216ENST00000624720 TMCC1O94876 653 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 HCLS1P14317 486 aaPredicted RBP10.19□□□□□ -0.78
USB1-216ENST00000624720 SMTNP53814 917 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 TIMM10P62072 90 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 TFCP2Q12800 502 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 CAMK2BQ13554 666 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 INAQ16352 499 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 PI16Q6UXB8 463 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 KIF6Q6ZMV9 814 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 EAF2Q96CJ1 260 aaPredicted RBP10.19□□□□□ -0.78
USB1-216ENST00000624720 CLIC6Q96NY7 704 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 CTAGE1Q96RT6 745 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 TBK1Q9UHD2 729 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 NSFL1CQ9UNZ2 370 aaKnown RBP10.19□□□□□ -0.78
USB1-216ENST00000624720 CNPY2Q9Y2B0 182 aa10.19□□□□□ -0.78
USB1-216ENST00000624720 PALM3A6NDB9 673 aaPredicted RBP10.18□□□□□ -0.78
USB1-216ENST00000624720 SOCS7O14512 581 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 MGEA5O60502 916 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 ALDH1L1O75891 902 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 IDO1P14902 403 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 ITPK1Q13572 414 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 LRRC24Q50LG9 513 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 PPP1R15BQ5SWA1 713 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 C10orf62Q5T681 223 aaPredicted RBP10.18□□□□□ -0.78
USB1-216ENST00000624720 C11orf74Q86VG3 221 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 ESX1Q8N693 406 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 LILRB1Q8NHL6 650 aaPredicted RBP10.18□□□□□ -0.78
USB1-216ENST00000624720 MAML3Q96JK9 1138 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 KIAA1522Q9P206 1035 aaPredicted RBP10.18□□□□□ -0.78
USB1-216ENST00000624720 GOLGA6L10A0A0M3HER8 536 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 LRRC37A3O60309 1634 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 PPIDQ08752 370 aaKnown RBP10.18□□□□□ -0.78
USB1-216ENST00000624720 LRMPQ12912 555 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 ITGA7Q13683 1181 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 MAP7Q14244 749 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 LBRQ14739 615 aaKnown RBP10.18□□□□□ -0.78
USB1-216ENST00000624720 PABPC1LQ4VXU2 614 aaKnown RBP10.18□□□□□ -0.78
USB1-216ENST00000624720 IQCEQ6IPM2 695 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 ZNF804AQ7Z570 1209 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 GOLGA1Q92805 767 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 ABCF3Q9NUQ8 709 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 MRGBPQ9NV56 204 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 EFR3BQ9Y2G0 817 aa10.18□□□□□ -0.78
USB1-216ENST00000624720 R3HDM2Q9Y2K5 976 aaKnown RBP10.18□□□□□ -0.78
USB1-216ENST00000624720 LIN7AO14910 233 aaPredicted RBP10.17□□□□□ -0.78
USB1-216ENST00000624720 LINGO3P0C6S8 592 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 CCNCP24863 283 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 CCT5P48643 541 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 NKX1-1Q15270 411 aaPredicted RBP10.17□□□□□ -0.78
USB1-216ENST00000624720 CCDC158Q5M9N0 1113 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 ANKRD49Q8WVL7 239 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 LZICQ8WZA0 190 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 LRRC45Q96CN5 670 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 SNX27Q96L92 541 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 NEK1Q96PY6 1258 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 XPO4Q9C0E2 1151 aaKnown RBP10.17□□□□□ -0.78
USB1-216ENST00000624720 SNRKQ9NRH2 765 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 TRMT112Q9UI30 125 aaKnown RBP10.17□□□□□ -0.78
USB1-216ENST00000624720 ABCA3Q99758 1704 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 A0A0B4J203 849 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 LOC102724428A0A0B4J2F2 783 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 IQCA1LA6NCM1 817 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 GNAQP50148 359 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 PMS2P54278 862 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 SIK1P57059 783 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 SUZ12Q15022 739 aaKnown RBP10.17□□□□□ -0.78
USB1-216ENST00000624720 SEPT7Q16181 437 aaKnown RBP10.17□□□□□ -0.78
USB1-216ENST00000624720 ZNF772Q68DY9 489 aaPredicted RBP10.17□□□□□ -0.78
USB1-216ENST00000624720 TMEM53Q6P2H8 277 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 FIP1L1Q6UN15 594 aaKnown RBP10.17□□□□□ -0.78
USB1-216ENST00000624720 CDHR1Q96JP9 859 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 UROC1Q96N76 676 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 UPF3BQ9BZI7 483 aaKnown RBP10.17□□□□□ -0.78
USB1-216ENST00000624720 SEPT10Q9P0V9 454 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 ATXN10Q9UBB4 475 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 HOOK1Q9UJC3 728 aaKnown RBP10.17□□□□□ -0.78
USB1-216ENST00000624720 USP54Q70EL1 1684 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 SPATA31A5Q5VU36 1347 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 SPATA31A7Q8IWB4 1347 aa10.17□□□□□ -0.78
USB1-216ENST00000624720 TRIM43BA6NCK2 446 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms