RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 C2CD5Q86YS7 1000 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.84■□□□□ 0.29
PMS1-221ENST00000624204 PLCD4Q9BRC7 762 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 TUBGCP2Q9BSJ2 902 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 TSGA10Q9BZW7 698 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 RIPOR2Q9Y4F9 1068 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
PMS1-221ENST00000624204 MTIF2P46199 727 aaKnown RBP16.84■□□□□ 0.29
PMS1-221ENST00000624204 DNM2P50570 870 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 FAM228AQ86W67 206 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 CCDC170Q8IYT3 715 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 IQCKQ8N0W5 287 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 SYNE4Q8N205 404 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 MIGA1Q8NAN2 632 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 RAPGEF4Q8WZA2 1011 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 TMOD1P28289 359 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 BIRC2Q13490 618 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 CRYMQ14894 314 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 TTC38Q5R3I4 469 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 TMC4Q7Z404 712 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 OR2W6PQ8NHA6 318 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 OSBPL7Q9BZF2 842 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 EXOC1Q9NV70 894 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 RMND1Q9NWS8 449 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 PLAAQ9Y263 795 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 PLEKHG1Q9ULL1 1385 aa16.83■□□□□ 0.29
PMS1-221ENST00000624204 PLCB4Q15147 1175 aa16.83■□□□□ 0.29
PMS1-221ENST00000624204 MEA1Q16626 185 aa16.83■□□□□ 0.29
PMS1-221ENST00000624204 FANCBQ8NB91 859 aa16.83■□□□□ 0.29
PMS1-221ENST00000624204 A0A1W2PQC6 194 aa16.83■□□□□ 0.28
PMS1-221ENST00000624204 SMIM23A6NLE4 172 aa16.83■□□□□ 0.28
PMS1-221ENST00000624204 ZBED6P86452 979 aa16.83■□□□□ 0.28
PMS1-221ENST00000624204 TRADDQ15628 312 aa16.83■□□□□ 0.28
PMS1-221ENST00000624204 METTL24Q5JXM2 366 aa16.83■□□□□ 0.28
PMS1-221ENST00000624204 CSGALNACT2Q8N6G5 542 aa16.83■□□□□ 0.28
PMS1-221ENST00000624204 KCNH5Q8NCM2 988 aa16.83■□□□□ 0.28
PMS1-221ENST00000624204 ACTR5Q9H9F9 607 aaPredicted RBP16.83■□□□□ 0.28
PMS1-221ENST00000624204 PCDHA13Q9Y5I0 950 aa16.83■□□□□ 0.28
PMS1-221ENST00000624204 TMCO5BA8MYB1 307 aa16.83■□□□□ 0.28
PMS1-221ENST00000624204 CALRP27797 417 aaKnown RBP16.83■□□□□ 0.28
PMS1-221ENST00000624204 GCKP35557 465 aa16.83■□□□□ 0.28
PMS1-221ENST00000624204 KSR1Q8IVT5 923 aa16.83■□□□□ 0.28
PMS1-221ENST00000624204 FAM89AQ96GI7 184 aa16.83■□□□□ 0.28
PMS1-221ENST00000624204 PIH1D3Q9NQM4 214 aaKnown RBP16.83■□□□□ 0.28
PMS1-221ENST00000624204 STAT6P42226 847 aa16.82■□□□□ 0.28
PMS1-221ENST00000624204 KLHL7Q8IXQ5 586 aa16.82■□□□□ 0.28
PMS1-221ENST00000624204 ZNF654Q8IZM8 581 aa16.82■□□□□ 0.28
PMS1-221ENST00000624204 ZNF507Q8TCN5 953 aa16.82■□□□□ 0.28
PMS1-221ENST00000624204 KRT12Q99456 494 aa16.82■□□□□ 0.28
PMS1-221ENST00000624204 SH2D4AQ9H788 454 aa16.82■□□□□ 0.28
PMS1-221ENST00000624204 TRHP20396 242 aaPredicted RBP16.82■□□□□ 0.28
PMS1-221ENST00000624204 MRPL12P52815 198 aaKnown RBP16.82■□□□□ 0.28
PMS1-221ENST00000624204 QPCTQ16769 361 aa16.82■□□□□ 0.28
PMS1-221ENST00000624204 MSL1Q68DK7 614 aa16.82■□□□□ 0.28
PMS1-221ENST00000624204 CCDC50Q8IVM0 306 aa16.82■□□□□ 0.28
PMS1-221ENST00000624204 FAM207AQ9NSI2 230 aaPredicted RBP16.82■□□□□ 0.28
PMS1-221ENST00000624204 PACSIN2Q9UNF0 486 aaPredicted RBP16.82■□□□□ 0.28
PMS1-221ENST00000624204 V9GY48 417 aaPredicted RBP16.82■□□□□ 0.28
PMS1-221ENST00000624204 MYH10P35580 1976 aa16.82■□□□□ 0.28
PMS1-221ENST00000624204 GMNCA6NCL1 334 aa16.82■□□□□ 0.28
PMS1-221ENST00000624204 SMIM22K7EJ46 135 aa16.82■□□□□ 0.28
PMS1-221ENST00000624204 PSMA7O14818 248 aa16.82■□□□□ 0.28
PMS1-221ENST00000624204 PRKAB2O43741 272 aa16.82■□□□□ 0.28
PMS1-221ENST00000624204 CIAO1O76071 339 aa16.82■□□□□ 0.28
PMS1-221ENST00000624204 PDE6AP16499 860 aa16.81■□□□□ 0.28
PMS1-221ENST00000624204 EEF1GP26641 437 aaKnown RBP16.81■□□□□ 0.28
PMS1-221ENST00000624204 SARNPP82979 210 aaKnown RBP16.81■□□□□ 0.28
PMS1-221ENST00000624204 CFAP221Q4G0U5 840 aa16.81■□□□□ 0.28
PMS1-221ENST00000624204 AKNAD1Q5T1N1 836 aa16.81■□□□□ 0.28
PMS1-221ENST00000624204 IFNL3Q8IZI9 196 aa16.81■□□□□ 0.28
PMS1-221ENST00000624204 THOC1Q96FV9 657 aaKnown RBP16.81■□□□□ 0.28
PMS1-221ENST00000624204 PURBQ96QR8 312 aaKnown RBP16.81■□□□□ 0.28
PMS1-221ENST00000624204 ARMT1Q9H993 441 aa16.81■□□□□ 0.28
PMS1-221ENST00000624204 PDS5AQ29RF7 1337 aaKnown RBP16.81■□□□□ 0.28
PMS1-221ENST00000624204 HMGB1P1B2RPK0 211 aaPredicted RBP16.81■□□□□ 0.28
PMS1-221ENST00000624204 BUB1BO60566 1050 aaPredicted RBP16.81■□□□□ 0.28
PMS1-221ENST00000624204 UPP2O95045 317 aa16.81■□□□□ 0.28
PMS1-221ENST00000624204 MBD4O95243 580 aa16.81■□□□□ 0.28
PMS1-221ENST00000624204 ITGB3BPQ13352 177 aaPredicted RBP16.81■□□□□ 0.28
PMS1-221ENST00000624204 PPP1R7Q15435 360 aa16.81■□□□□ 0.28
PMS1-221ENST00000624204 ACCSLQ4AC99 568 aa16.81■□□□□ 0.28
PMS1-221ENST00000624204 ANKRD20A8PQ5CZ79 823 aa16.81■□□□□ 0.28
PMS1-221ENST00000624204 HIBCHQ6NVY1 386 aaPredicted RBP16.81■□□□□ 0.28
PMS1-221ENST00000624204 PDXDC2PQ6P474 469 aa16.81■□□□□ 0.28
PMS1-221ENST00000624204 CPLX4Q7Z7G2 160 aa16.81■□□□□ 0.28
PMS1-221ENST00000624204 CACNA2D3Q8IZS8 1091 aa16.81■□□□□ 0.28
PMS1-221ENST00000624204 ARFGAP2Q8N6H7 521 aa16.81■□□□□ 0.28
PMS1-221ENST00000624204 RSRC1Q96IZ7 334 aaKnown RBP16.81■□□□□ 0.28
PMS1-221ENST00000624204 NOC4LQ9BVI4 516 aaKnown RBP16.81■□□□□ 0.28
PMS1-221ENST00000624204 DIP2AQ14689 1571 aa16.81■□□□□ 0.28
PMS1-221ENST00000624204 GCOM1H8Y6P7 765 aaPredicted RBP16.8■□□□□ 0.28
PMS1-221ENST00000624204 GCP02774 474 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 MYZAPP0CAP1 466 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 SRGNP10124 158 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 SLC8A1P32418 973 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 EIF4A3P38919 411 aaKnown RBP16.8■□□□□ 0.28
PMS1-221ENST00000624204 MAGEA1P43355 309 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 KIF11P52732 1056 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 CYB5RLQ6IPT4 315 aa16.8■□□□□ 0.28
PMS1-221ENST00000624204 C6orf89Q6UWU4 347 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms