RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 MOCS3O95396 460 aa13.03□□□□□ -0.32
ATRX-214ENST00000624166 TNFAIP3P21580 790 aa13.03□□□□□ -0.32
ATRX-214ENST00000624166 DEPDC5O75140 1603 aa13.03□□□□□ -0.32
ATRX-214ENST00000624166 KIF1CO43896 1103 aaKnown RBP13.02□□□□□ -0.32
ATRX-214ENST00000624166 PHKA1P46020 1223 aa13.02□□□□□ -0.32
ATRX-214ENST00000624166 KIF11P52732 1056 aa13.02□□□□□ -0.32
ATRX-214ENST00000624166 WDR93Q6P2C0 686 aa13.02□□□□□ -0.32
ATRX-214ENST00000624166 FAM114A2Q9NRY5 505 aa13.02□□□□□ -0.32
ATRX-214ENST00000624166 FBXO2Q9UK22 296 aaPredicted RBP13.02□□□□□ -0.32
ATRX-214ENST00000624166 UTYO14607 1347 aa13.02□□□□□ -0.32
ATRX-214ENST00000624166 UBN2Q6ZU65 1347 aa13.02□□□□□ -0.32
ATRX-214ENST00000624166 EIF4A3P38919 411 aaKnown RBP13.02□□□□□ -0.32
ATRX-214ENST00000624166 PARP10Q53GL7 1025 aa13.02□□□□□ -0.32
ATRX-214ENST00000624166 HERC4Q5GLZ8 1057 aaPredicted RBP13.02□□□□□ -0.32
ATRX-214ENST00000624166 VSIG1Q86XK7 387 aa13.02□□□□□ -0.32
ATRX-214ENST00000624166 HDAC9Q9UKV0 1011 aa13.02□□□□□ -0.32
ATRX-214ENST00000624166 NIP7Q9Y221 180 aaKnown RBP eCLIP13.02□□□□□ -0.32
ATRX-214ENST00000624166 CALUO43852 315 aaPredicted RBP13.02□□□□□ -0.33
ATRX-214ENST00000624166 CDC27P30260 824 aa13.02□□□□□ -0.33
ATRX-214ENST00000624166 MRPL12P52815 198 aaKnown RBP13.02□□□□□ -0.33
ATRX-214ENST00000624166 SLC7A5Q01650 507 aa13.02□□□□□ -0.33
ATRX-214ENST00000624166 CALCRLQ16602 461 aa13.02□□□□□ -0.33
ATRX-214ENST00000624166 NBPF9Q3BBW0 867 aa13.02□□□□□ -0.33
ATRX-214ENST00000624166 EHMT1Q9H9B1 1298 aa13.02□□□□□ -0.33
ATRX-214ENST00000624166 HPCAL4Q9UM19 191 aa13.02□□□□□ -0.33
ATRX-214ENST00000624166 BZW2Q9Y6E2 419 aaKnown RBP13.02□□□□□ -0.33
ATRX-214ENST00000624166 TTC26A0AVF1 554 aa13.02□□□□□ -0.33
ATRX-214ENST00000624166 CLTAP09496 248 aa13.02□□□□□ -0.33
ATRX-214ENST00000624166 CYB5R4Q7L1T6 521 aa13.02□□□□□ -0.33
ATRX-214ENST00000624166 TBC1D10CQ8IV04 446 aa13.02□□□□□ -0.33
ATRX-214ENST00000624166 GPIHBP1Q8IV16 184 aa13.02□□□□□ -0.33
ATRX-214ENST00000624166 N4BP2L2Q92802 583 aaPredicted RBP13.02□□□□□ -0.33
ATRX-214ENST00000624166 CPDO75976 1380 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 PTPRUQ92729 1446 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 EIF3HO15372 352 aaKnown RBP eCLIP13.01□□□□□ -0.338e-8■■■■■ 27
ATRX-214ENST00000624166 CXCR5P32302 372 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 ZBTB16Q05516 673 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 CUL1Q13616 776 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 CCNI2Q6ZMN8 369 aaPredicted RBP13.01□□□□□ -0.33
ATRX-214ENST00000624166 PBKQ96KB5 322 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 STRBPQ96SI9 672 aaKnown RBP13.01□□□□□ -0.33
ATRX-214ENST00000624166 CEP83Q9Y592 693 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 MROH7-TTC4A0A0A0MT08 1334 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 LUC7L3O95232 432 aaKnown RBP13.01□□□□□ -0.33
ATRX-214ENST00000624166 H2AFZP0C0S5 128 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 INF2Q27J81 1249 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 H2AFVQ71UI9 128 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 LY9Q9HBG7 655 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 TMEM110-MUSTN1A8MSY1 372 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 HIP1RO75146 1068 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 ATP1A1P05023 1023 aaKnown RBP13.01□□□□□ -0.33
ATRX-214ENST00000624166 PLCG2P16885 1265 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 POLR2FP61218 127 aaKnown RBP13.01□□□□□ -0.33
ATRX-214ENST00000624166 ALX1Q15699 326 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 PI16Q6UXB8 463 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 ZSCAN29Q8IWY8 852 aaPredicted RBP13.01□□□□□ -0.33
ATRX-214ENST00000624166 P3H4Q92791 437 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 ORAI2Q96SN7 254 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 NT5C3AQ9H0P0 336 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 SLC39A2Q9NP94 309 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 ARPP21Q9UBL0 812 aaPredicted RBP13.01□□□□□ -0.33
ATRX-214ENST00000624166 HDAC6Q9UBN7 1215 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 NFU1Q9UMS0 254 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 ATP6V0A2Q9Y487 856 aa13.01□□□□□ -0.33
ATRX-214ENST00000624166 USP17L12C9JPN9 530 aa13□□□□□ -0.33
ATRX-214ENST00000624166 USP17L21D6R901 530 aa13□□□□□ -0.33
ATRX-214ENST00000624166 PSMD14O00487 310 aa13□□□□□ -0.33
ATRX-214ENST00000624166 MEFVO15553 781 aaPredicted RBP13□□□□□ -0.33
ATRX-214ENST00000624166 BIRC3Q13489 604 aa13□□□□□ -0.33
ATRX-214ENST00000624166 HAUS3Q68CZ6 603 aa13□□□□□ -0.33
ATRX-214ENST00000624166 REXO1Q8N1G1 1221 aaKnown RBP13□□□□□ -0.33
ATRX-214ENST00000624166 RIC8AQ9NPQ8 531 aa13□□□□□ -0.33
ATRX-214ENST00000624166 HPSEQ9Y251 543 aa13□□□□□ -0.33
ATRX-214ENST00000624166 FAM13AO94988 1023 aa13□□□□□ -0.33
ATRX-214ENST00000624166 FXR1P51114 621 aaKnown RBP eCLIP13□□□□□ -0.33
ATRX-214ENST00000624166 DRP2Q13474 957 aa13□□□□□ -0.33
ATRX-214ENST00000624166 RAB3IPQ96QF0 476 aaPredicted RBP13□□□□□ -0.33
ATRX-214ENST00000624166 VCXQ9H320 206 aa13□□□□□ -0.33
ATRX-214ENST00000624166 RAB21Q9UL25 225 aa13□□□□□ -0.33
ATRX-214ENST00000624166 CAPN11Q9UMQ6 739 aa13□□□□□ -0.33
ATRX-214ENST00000624166 IKBKGQ9Y6K9 419 aa13□□□□□ -0.33
ATRX-214ENST00000624166 PPLO60437 1756 aa13□□□□□ -0.33
ATRX-214ENST00000624166 H3BQF6 201 aa13□□□□□ -0.33
ATRX-214ENST00000624166 PGRMC1O00264 195 aaKnown RBP13□□□□□ -0.33
ATRX-214ENST00000624166 CTNNA2P26232 953 aa13□□□□□ -0.33
ATRX-214ENST00000624166 RASSF2P50749 326 aa13□□□□□ -0.33
ATRX-214ENST00000624166 IRAK1P51617 712 aa13□□□□□ -0.33
ATRX-214ENST00000624166 EIF3BP55884 814 aaKnown RBP13□□□□□ -0.33
ATRX-214ENST00000624166 PPARDQ03181 441 aa13□□□□□ -0.33
ATRX-214ENST00000624166 SLMAPQ14BN4 828 aa13□□□□□ -0.33
ATRX-214ENST00000624166 E2F5Q15329 346 aa13□□□□□ -0.33
ATRX-214ENST00000624166 USP37Q86T82 979 aa13□□□□□ -0.33
ATRX-214ENST00000624166 GSPT2Q8IYD1 628 aaKnown RBP13□□□□□ -0.33
ATRX-214ENST00000624166 RNF10Q8N5U6 811 aaKnown RBP13□□□□□ -0.33
ATRX-214ENST00000624166 TBC1D31Q96DN5 1066 aa13□□□□□ -0.33
ATRX-214ENST00000624166 EEF2KMTQ96G04 330 aa13□□□□□ -0.33
ATRX-214ENST00000624166 PNKPQ96T60 521 aa13□□□□□ -0.33
ATRX-214ENST00000624166 MMS19Q96T76 1030 aa13□□□□□ -0.33
ATRX-214ENST00000624166 DISC1Q9NRI5 854 aa13□□□□□ -0.33
ATRX-214ENST00000624166 GDAQ9Y2T3 454 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms