RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PAPD7Q5XG87 772 aaKnown RBP8.74□□□□□ -1.01
VPS11-209ENST00000622309 ENOX1Q8TC92 643 aaKnown RBP8.74□□□□□ -1.01
VPS11-209ENST00000622309 SSH3Q8TE77 659 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 MAIP1Q8WWC4 291 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 CCT6BQ92526 530 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 LRRC1Q9BTT6 524 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 PIDD1Q9HB75 910 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 SAMSN1Q9NSI8 373 aaKnown RBP8.74□□□□□ -1.01
VPS11-209ENST00000622309 TAF6LQ9Y6J9 622 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 A0A1B0GTH6 734 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 PPIP5K2O43314 1243 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 TRIM37O94972 964 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 NPTXRO95502 500 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 ZNF18P17022 549 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 MAGEA10P43363 369 aaPredicted RBP8.74□□□□□ -1.01
VPS11-209ENST00000622309 QPCTQ16769 361 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 ZMYM1Q5SVZ6 1142 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 EMC10Q5UCC4 262 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 RNF168Q8IYW5 571 aaPredicted RBP8.74□□□□□ -1.01
VPS11-209ENST00000622309 MKL1Q969V6 931 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 NUP88Q99567 741 aaPredicted RBP8.74□□□□□ -1.01
VPS11-209ENST00000622309 ANKIB1Q9P2G1 1089 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 TRIM10Q9UDY6 481 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 DMGDHQ9UI17 866 aaKnown RBP8.74□□□□□ -1.01
VPS11-209ENST00000622309 DLG5Q8TDM6 1919 aa8.74□□□□□ -1.01
VPS11-209ENST00000622309 CCT8L1PA6NM43 557 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 IPO5O00410 1097 aaKnown RBP8.73□□□□□ -1.01
VPS11-209ENST00000622309 ATP2A2P16615 1042 aaKnown RBP8.73□□□□□ -1.01
VPS11-209ENST00000622309 MAP3K12Q12852 859 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 FAM117BQ6P1L5 589 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 MLKLQ8NB16 471 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 ZC3H15Q8WU90 426 aaKnown RBP8.73□□□□□ -1.01
VPS11-209ENST00000622309 HDAC7Q8WUI4 952 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 CAVIN3Q969G5 261 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 ORAI2Q96SN7 254 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 RANBP17Q9H2T7 1088 aaKnown RBP8.73□□□□□ -1.01
VPS11-209ENST00000622309 KDRP35968 1356 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 COL22A1Q8NFW1 1626 aaPredicted RBP8.73□□□□□ -1.01
VPS11-209ENST00000622309 KDM6AO15550 1401 aaPredicted RBP8.73□□□□□ -1.01
VPS11-209ENST00000622309 SPDYE5A6NIY4 337 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 ZNF233A6NK53 670 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 CHL1O00533 1208 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 ZNF185O15231 689 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 TRAPPC3O43617 180 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 MRPS25P82663 173 aaKnown RBP8.73□□□□□ -1.01
VPS11-209ENST00000622309 MYBPC3Q14896 1274 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 EZH2Q15910 746 aaKnown RBP8.73□□□□□ -1.01
VPS11-209ENST00000622309 IFI16Q16666 785 aaKnown RBP8.73□□□□□ -1.01
VPS11-209ENST00000622309 ANO1Q5XXA6 986 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 NBPF15Q8N660 670 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 CCDC197Q8NCU1 140 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 NDST4Q9H3R1 872 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 AKAP12Q02952 1782 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 PDLIM1O00151 329 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 BACH1O14867 736 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 ZNF189O75820 626 aaPredicted RBP8.73□□□□□ -1.01
VPS11-209ENST00000622309 GSTA1P08263 222 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 PARP1P09874 1014 aaKnown RBP8.73□□□□□ -1.01
VPS11-209ENST00000622309 IDEP14735 1019 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 HOXC9P31274 260 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 ITGB3BPQ13352 177 aaPredicted RBP8.73□□□□□ -1.01
VPS11-209ENST00000622309 RASA3Q14644 834 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 Q4G0T1 1027 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 MMGT1Q8N4V1 131 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 FSD1Q9BTV5 496 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 MOV10L1Q9BXT6 1211 aaKnown RBP8.73□□□□□ -1.01
VPS11-209ENST00000622309 TRIM7Q9C029 511 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 UBE2OQ9C0C9 1292 aaKnown RBP8.73□□□□□ -1.01
VPS11-209ENST00000622309 VCXQ9H320 206 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 STIM2Q9P246 746 aa8.73□□□□□ -1.01
VPS11-209ENST00000622309 EPN1Q9Y6I3 576 aaPredicted RBP8.73□□□□□ -1.01
VPS11-209ENST00000622309 ZMYM6O95789 1325 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 PDHA1P08559 390 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 VIMP08670 466 aaKnown RBP8.72□□□□□ -1.01
VPS11-209ENST00000622309 CDC27P30260 824 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 ERVK-24P63145 666 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 FMR1Q06787 632 aaKnown RBP eCLIP8.72□□□□□ -1.013e-6■■□□□ 13.5
VPS11-209ENST00000622309 MPP3Q13368 585 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 SEPT2Q15019 361 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 TSR1Q2NL82 804 aaKnown RBP8.72□□□□□ -1.01
VPS11-209ENST00000622309 CCDC129Q6ZRS4 1044 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 CCDC155Q8N6L0 562 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 CNBD1Q8NA66 436 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 RSPH1Q8WYR4 309 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 OPTNQ96CV9 577 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 GJD4Q96KN9 370 aaPredicted RBP8.72□□□□□ -1.01
VPS11-209ENST00000622309 ANKRD27Q96NW4 1050 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 CTAGE1Q96RT6 745 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 ZWILCHQ9H900 591 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 PCMTD2Q9NV79 361 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 GALNT8Q9NY28 637 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 FLT4P35916 1363 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 CFAP69A5D8W1 941 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 PDE2AO00408 941 aaPredicted RBP8.72□□□□□ -1.01
VPS11-209ENST00000622309 ABLIM1O14639 778 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 KRT86O43790 486 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 ALDH1B1P30837 517 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 FXR1P51114 621 aaKnown RBP eCLIP8.72□□□□□ -1.01
VPS11-209ENST00000622309 LACTBP83111 547 aaPredicted RBP8.72□□□□□ -1.01
VPS11-209ENST00000622309 ATP11AP98196 1134 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms