RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 IRX5P78411 483 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-211ENST00000621526 SHC2P98077 582 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 BEX3Q00994 111 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 RBL2Q08999 1139 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 HYAL1Q12794 435 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 RAB3GAP1Q15042 981 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 ATP2B3Q16720 1220 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 TWISTNBQ3B726 338 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-211ENST00000621526 NCBP3Q53F19 620 aaKnown RBP2.92□□□□□ -1.94
CPNE3-211ENST00000621526 NAALADL2Q58DX5 795 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 BRDTQ58F21 947 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-211ENST00000621526 LRSAM1Q6UWE0 723 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 TMEM184AQ6ZMB5 413 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 SIAH1Q8IUQ4 282 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 CCDC155Q8N6L0 562 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 EFHBQ8N7U6 833 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 ANKRD44Q8N8A2 993 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 SMRP1Q8NCR6 262 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.92□□□□□ -1.94
CPNE3-211ENST00000621526 TGFBRAP1Q8WUH2 860 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 SUSD6Q92537 303 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 TOP1MTQ969P6 601 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 LENG1Q96BZ8 264 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-211ENST00000621526 SUCLG2Q96I99 432 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 CRBNQ96SW2 442 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 NOL10Q9BSC4 688 aaKnown RBP2.92□□□□□ -1.94
CPNE3-211ENST00000621526 C17orf80Q9BSJ5 609 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 MTG1Q9BT17 334 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-211ENST00000621526 PLVAPQ9BX97 442 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 SRCIN1Q9C0H9 1055 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 TRMT13Q9NUP7 481 aaKnown RBP2.92□□□□□ -1.94
CPNE3-211ENST00000621526 RNF216Q9NWF9 866 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-211ENST00000621526 CLEC1BQ9P126 229 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 FBXO40Q9UH90 709 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 ZHX1Q9UKY1 873 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-211ENST00000621526 ZNF214Q9UL59 606 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-211ENST00000621526 MTUS1Q9ULD2 1270 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 AKAP2Q9Y2D5 859 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 TMX2Q9Y320 296 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 RWDD3Q9Y3V2 267 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 MAST2Q6P0Q8 1798 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 MYO15AQ9UKN7 3530 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 DMDP11532 3685 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 PLXNB2O15031 1838 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 ARAP2Q8WZ64 1704 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 BRWD1Q9NSI6 2320 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 LOC102724159A0A0B4J2E5 919 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 WDR46O15213 610 aaKnown RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 ADCY6O43306 1168 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 PDGFBP01127 241 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 AMHP03971 560 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 PROS1P07225 676 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 FDX1P10109 184 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 HOXB3P14651 431 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 AOC1P19801 751 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 CPT1AP50416 773 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 OAZ1P54368 228 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 TIMM10P62072 90 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 PSMC6P62333 389 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 DEFB103AP81534 67 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 PURAQ00577 322 aaKnown RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 LMNB2Q03252 620 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 DMWDQ09019 674 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 MKRN4PQ13434 485 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 RASGRF1Q13972 1273 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 COL9A3Q14050 684 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 MVPQ14764 893 aaKnown RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 PWP2Q15269 919 aaKnown RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 RALBP1Q15311 655 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 ANGPT1Q15389 498 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 ZYXQ15942 572 aaKnown RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 CCDC27Q2M243 656 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 SHROOM1Q2M3G4 852 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 DUSP28Q4G0W2 176 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 TAPT1Q6NXT6 567 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 ZC3H14Q6PJT7 736 aaKnown RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 FAM43BQ6ZT52 329 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 NOL8Q76FK4 1167 aaKnown RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 ARMCX2Q7L311 632 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 SESTD1Q86VW0 696 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 FBXO11Q86XK2 927 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 CCDC144CPQ8IYA2 1237 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 CCDC105Q8IYK2 499 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 PLCD3Q8N3E9 789 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 PRPF38AQ8NAV1 312 aaKnown RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 KDF1Q8NAX2 398 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 DTWD2Q8NBA8 298 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 SUMF1Q8NBK3 374 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 CHST13Q8NET6 341 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 REPS2Q8NFH8 660 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 CYP2W1Q8TAV3 490 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 SH3RF3Q8TEJ3 882 aaPredicted RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 ATP8B4Q8TF62 1192 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 DDX1Q92499 740 aaKnown RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 CLP1Q92989 425 aaKnown RBP2.91□□□□□ -1.94
CPNE3-211ENST00000621526 P2RX5Q93086 422 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 ATG4CQ96DT6 458 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 RPGRIP1Q96KN7 1286 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 CCDC17Q96LX7 622 aa2.91□□□□□ -1.94
CPNE3-211ENST00000621526 C11orf84Q9BUA3 381 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms