RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 TRAF1Q13077 416 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 CERKLQ49MI3 558 aaPredicted RBP9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 TC2NQ8N9U0 490 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 FNBP1Q96RU3 617 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 ABT1Q9ULW3 272 aaKnown RBP9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 ATP2C2O75185 946 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 CDC25AP30304 524 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 LEKR1Q6ZMV7 388 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 CCDC50Q8IVM0 306 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 SYMPKQ92797 1274 aaKnown RBP9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 SH2D4AQ9H788 454 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 LRWD1Q9UFC0 647 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 SYNRGQ9UMZ2 1314 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 EFCAB8A8MWE9 144 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 B4DLN1 442 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 TADA3O75528 432 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 ABL1P00519 1130 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 CD19P15391 556 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 PLCD1P51178 756 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 IFRD2Q12894 506 aaPredicted RBP9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 MORC3Q14149 939 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 PNMA1Q8ND90 353 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 CNKSR1Q969H4 720 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 DCPSQ96C86 337 aaKnown RBP9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 CCDC42Q96M95 316 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 PLEKHA8P1O95397 391 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 FGFR2P21802 821 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 MDM2Q00987 491 aaPredicted RBP9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 PRR16Q569H4 304 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 KCTD1Q719H9 257 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 DYNLL2Q96FJ2 89 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 CPVLQ9H3G5 476 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 CTNND2Q9UQB3 1225 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 TTLL3Q9Y4R7 772 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 PKD1L3Q7Z443 1732 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 RTL9Q8NET4 1388 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 FAM237AA0A1B0GTK4 181 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 SMCO2A6NFE2 343 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 KLRF2D3W0D1 207 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 FANCGO15287 622 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 ZBED4O75132 1171 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 ICA1Q05084 483 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 RBL2Q08999 1139 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 SF3A3Q12874 501 aaKnown RBP eCLIP9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 INF2Q27J81 1249 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 MAATS1Q7Z4T9 603 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 CCDC25Q86WR0 208 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 TBC1D5Q92609 795 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 PAIP2Q9BPZ3 127 aaKnown RBP9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 CCDC66A2RUB6 948 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 ACTN4O43707 911 aaKnown RBP9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 SMC1AQ14683 1233 aaKnown RBP9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 EARS2Q5JPH6 523 aaKnown RBP9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 ZNF772Q68DY9 489 aaPredicted RBP9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 KSR1Q8IVT5 923 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 PCDHB13Q9Y5F0 798 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 FHOD1Q9Y613 1164 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 TLDC2A0PJX2 215 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 IL6STP40189 918 aaPredicted RBP9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 MCM6Q14566 821 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 KIAA0753Q2KHM9 967 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 ZNF569Q5MCW4 686 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 TMEM139Q8IV31 216 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 JAKMIP2Q96AA8 810 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 POLD4Q9HCU8 107 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 ARFGAP3Q9NP61 516 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 TNS2Q63HR2 1409 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 GLI3P10071 1580 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 NUP188Q5SRE5 1749 aa9.19□□□□□ -0.94
PTPDC1-204ENST00000620992 WTIPA6NIX2 430 aaPredicted RBP9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 EZRP15311 586 aaKnown RBP9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 TBC1D8BQ0IIM8 1120 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 DNAJC21Q5F1R6 531 aaKnown RBP9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 TTC38Q5R3I4 469 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 SV2BQ7L1I2 683 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 ADGRA1Q86SQ6 560 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 REXO1Q8N1G1 1221 aaKnown RBP9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 TRIML1Q8N9V2 468 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 APOL6Q9BWW8 343 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 AZI2Q9H6S1 392 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 MRPL44Q9H9J2 332 aaKnown RBP9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 RMND1Q9NWS8 449 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 MYO5AQ9Y4I1 1855 aaKnown RBP9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 PLEKHG2Q9H7P9 1386 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 CASP14P31944 242 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 LLGL1Q15334 1064 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 FAM114A1Q8IWE2 563 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 MYCT1Q8N699 235 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 ENAHQ8N8S7 591 aaPredicted RBP9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 TBC1D22AQ8WUA7 517 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 PAGE5Q96GU1 130 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 ZSCAN10Q96SZ4 725 aaPredicted RBP9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 RNF26Q9BY78 433 aaPredicted RBP9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 MLXIPQ9HAP2 919 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 ATRNO75882 1429 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 DCCP43146 1447 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 SOS2Q07890 1332 aaPredicted RBP9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 A0A087X0B3 334 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 USP17L8P0C7I0 530 aa9.18□□□□□ -0.94
PTPDC1-204ENST00000620992 ZNF18P17022 549 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms