RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 OXER1Q8TDS5 423 aa9.27□□□□□ -0.93
TARDBP-219ENST00000617757 CCDC102AQ96A19 550 aa9.27□□□□□ -0.93
TARDBP-219ENST00000617757 AGBL1Q96MI9 1066 aa9.27□□□□□ -0.93
TARDBP-219ENST00000617757 PTPN18Q99952 460 aa9.27□□□□□ -0.93
TARDBP-219ENST00000617757 ASCC2Q9H1I8 757 aaPredicted RBP9.27□□□□□ -0.93
TARDBP-219ENST00000617757 FOXP1Q9H334 677 aaPredicted RBP9.27□□□□□ -0.93
TARDBP-219ENST00000617757 RAVER2Q9HCJ3 691 aaKnown RBP9.27□□□□□ -0.93
TARDBP-219ENST00000617757 C6orf50Q9HD87 102 aa9.27□□□□□ -0.93
TARDBP-219ENST00000617757 RIC8AQ9NPQ8 531 aa9.27□□□□□ -0.93
TARDBP-219ENST00000617757 PCDHA4Q9UN74 947 aa9.27□□□□□ -0.93
TARDBP-219ENST00000617757 SLC45A1Q9Y2W3 748 aa9.27□□□□□ -0.93
TARDBP-219ENST00000617757 CTDP1Q9Y5B0 961 aaPredicted RBP9.27□□□□□ -0.93
TARDBP-219ENST00000617757 ABCB11O95342 1321 aa9.27□□□□□ -0.93
TARDBP-219ENST00000617757 MGAMO43451 1857 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 PLXNA1Q9UIW2 1896 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 PDHXO00330 501 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 ATP2A1O14983 1001 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 ADCY7P51828 1080 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 HERVK_113P62684 666 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 NR5A1Q13285 461 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 GNL2Q13823 731 aaKnown RBP9.26□□□□□ -0.93
TARDBP-219ENST00000617757 TMEM132BQ14DG7 1078 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 FAM173BQ6P4H8 233 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 BRAPQ7Z569 592 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 CPXCR1Q8N123 301 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 FAM43AQ8N2R8 423 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 BICD2Q8TD16 824 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 CUL5Q93034 780 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 TNFRSF25Q93038 417 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 BRMS1Q9HCU9 246 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 CREBZFQ9NS37 354 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 PNMA3Q9UL41 463 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 ZNF214Q9UL59 606 aaPredicted RBP9.26□□□□□ -0.93
TARDBP-219ENST00000617757 CCPG1Q9ULG6 757 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 PCDHA6Q9UN73 950 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 MRPL11Q9Y3B7 192 aaKnown RBP9.26□□□□□ -0.93
TARDBP-219ENST00000617757 PCDHA8Q9Y5H6 950 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 ATP6V1DQ9Y5K8 247 aa9.26□□□□□ -0.93
TARDBP-219ENST00000617757 RASSF10A6NK89 507 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 OPLAHO14841 1288 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 CNMDO75829 334 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 BAG4O95429 457 aaKnown RBP9.25□□□□□ -0.93
TARDBP-219ENST00000617757 CYP2C8P10632 490 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 ALAS1P13196 640 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 CLK2P49760 499 aaKnown RBP9.25□□□□□ -0.93
TARDBP-219ENST00000617757 MRPL12P52815 198 aaKnown RBP9.25□□□□□ -0.93
TARDBP-219ENST00000617757 INHBEP58166 350 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 DEFB115Q30KQ5 88 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 FOXD4L6Q3SYB3 417 aaPredicted RBP9.25□□□□□ -0.93
TARDBP-219ENST00000617757 EARS2Q5JPH6 523 aaKnown RBP9.25□□□□□ -0.93
TARDBP-219ENST00000617757 FOXD4L3Q6VB84 417 aaPredicted RBP9.25□□□□□ -0.93
TARDBP-219ENST00000617757 NOSTRINQ8IVI9 506 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 MB21D1Q8N884 522 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 RASGRP4Q8TDF6 673 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 GLT8D2Q9H1C3 349 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 PSTPIP2Q9H939 334 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 BTBD7Q9P203 1132 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 RBPJLQ9UBG7 517 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 BIN2Q9UBW5 565 aaPredicted RBP9.25□□□□□ -0.93
TARDBP-219ENST00000617757 PNMA2Q9UL42 364 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 RIPK3Q9Y572 518 aa9.25□□□□□ -0.93
TARDBP-219ENST00000617757 FAM205CA6NFA0 338 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 IGF2BP3O00425 579 aaKnown RBP eCLIP9.24□□□□□ -0.93
TARDBP-219ENST00000617757 MEIS2O14770 477 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 PEX10O60683 326 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 STAT3P40763 770 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 TM4SF4P48230 202 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 PLS1Q14651 629 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 UBE2SQ16763 222 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 TKFCQ3LXA3 575 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 NOM1Q5C9Z4 860 aaKnown RBP9.24□□□□□ -0.93
TARDBP-219ENST00000617757 MUM1L1Q5H9M0 696 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 MYSM1Q5VVJ2 828 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 SNRNP48Q6IEG0 339 aaKnown RBP9.24□□□□□ -0.93
TARDBP-219ENST00000617757 CYP4F22Q6NT55 531 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 USP17L6PQ6QN14 398 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 CLEC17AQ6ZS10 378 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 PAXIP1Q6ZW49 1069 aaPredicted RBP9.24□□□□□ -0.93
TARDBP-219ENST00000617757 REXO1Q8N1G1 1221 aaKnown RBP9.24□□□□□ -0.93
TARDBP-219ENST00000617757 GTF3C2Q8WUA4 911 aaPredicted RBP9.24□□□□□ -0.93
TARDBP-219ENST00000617757 CLEC4DQ8WXI8 215 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 TBC1D5Q92609 795 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 CHAMP1Q96JM3 812 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 TRERF1Q96PN7 1200 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 TXNRD2Q9NNW7 524 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 ZCCHC17Q9NP64 241 aaKnown RBP9.24□□□□□ -0.93
TARDBP-219ENST00000617757 TMEM260Q9NX78 707 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 RABGAP1Q9Y3P9 1069 aa9.24□□□□□ -0.93
TARDBP-219ENST00000617757 THSD7BQ9C0I4 1608 aa9.23□□□□□ -0.93
TARDBP-219ENST00000617757 CCDC194A0A1B0GVG4 234 aa9.23□□□□□ -0.93
TARDBP-219ENST00000617757 PIK3CDO00329 1044 aa9.23□□□□□ -0.93
TARDBP-219ENST00000617757 NFIBO00712 420 aa9.23□□□□□ -0.93
TARDBP-219ENST00000617757 CFBP00751 764 aa9.23□□□□□ -0.93
TARDBP-219ENST00000617757 ATXN8OSP0DMR3 200 aa9.23□□□□□ -0.93
TARDBP-219ENST00000617757 TOB1P50616 345 aaPredicted RBP9.23□□□□□ -0.93
TARDBP-219ENST00000617757 GHRHRQ02643 423 aa9.23□□□□□ -0.93
TARDBP-219ENST00000617757 DNM1Q05193 864 aaKnown RBP9.23□□□□□ -0.93
TARDBP-219ENST00000617757 SREBF2Q12772 1141 aa9.23□□□□□ -0.93
TARDBP-219ENST00000617757 GRM1Q13255 1194 aa9.23□□□□□ -0.93
TARDBP-219ENST00000617757 Q3C1V9 767 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms