RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 CCNYQ8ND76 341 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 HIPK4Q8NE63 616 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 ATP6V0A1Q93050 837 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 PHACTR3Q96KR7 559 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 USP26Q9BXU7 913 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 NT5C3AQ9H0P0 336 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 FAM95CA0A1B0GW59 222 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 GPAA1O43292 621 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 GNA14O95837 355 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 POLR2FP61218 127 aaKnown RBP6.54□□□□□ -1.36
RFX3-212ENST00000617270 DYNLT1P63172 113 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 CCDC85BQ15834 202 aaPredicted RBP6.54□□□□□ -1.36
RFX3-212ENST00000617270 EAPPQ56P03 285 aaPredicted RBP6.54□□□□□ -1.36
RFX3-212ENST00000617270 ARHGEF16Q5VV41 709 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 DNAAF3Q8N9W5 541 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 HEXIM1O94992 359 aaKnown RBP6.54□□□□□ -1.36
RFX3-212ENST00000617270 OCM2P0CE71 109 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 OCMP0CE72 109 aaPredicted RBP6.54□□□□□ -1.36
RFX3-212ENST00000617270 SLCO1A2P46721 670 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 GLE1Q53GS7 698 aaKnown RBP6.54□□□□□ -1.36
RFX3-212ENST00000617270 XKR9Q5GH70 373 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 GRAMD4Q6IC98 578 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 YY1AP1Q9H869 796 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 GGA1Q9UJY5 639 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 PNMA2Q9UL42 364 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 PPP2R2CQ9Y2T4 447 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 NDUFB9Q9Y6M9 179 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 BNIP3LO60238 219 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 NCF2P19878 526 aaPredicted RBP6.54□□□□□ -1.36
RFX3-212ENST00000617270 GRAMD1BQ3KR37 738 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 TRIM67Q6ZTA4 783 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 PLEKHM2Q8IWE5 1019 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 BBOF1Q8ND07 529 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 FAM89AQ96GI7 184 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 CYTH2Q99418 400 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 SERTAD1Q9UHV2 236 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 E9PMD0 336 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 TAF5LO75529 589 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 SERPINI2O75830 405 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 TCIRG1Q13488 830 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 MYOCDQ8IZQ8 938 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 LARGE2Q8N3Y3 721 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 ANKRD13CQ8N6S4 541 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 ADPGKQ9BRR6 497 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 RRAGDQ9NQL2 400 aaPredicted RBP6.54□□□□□ -1.36
RFX3-212ENST00000617270 LMCD1Q9NZU5 365 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 ARMCX3Q9UH62 379 aaPredicted RBP6.54□□□□□ -1.36
RFX3-212ENST00000617270 TBK1Q9UHD2 729 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 ZNF827Q17R98 1081 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 ZNF449Q6P9G9 518 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 GOLGA5Q8TBA6 731 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 IQCDQ96DY2 449 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 CFAP36Q96G28 342 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 SKOR1P84550 965 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 ART3Q13508 389 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 LLGL1Q15334 1064 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 Q3C1V9 767 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 ARHGEF18Q6ZSZ5 1173 aa6.54□□□□□ -1.36
RFX3-212ENST00000617270 LRRC59Q96AG4 307 aaKnown RBP6.54□□□□□ -1.36
RFX3-212ENST00000617270 KDM3AQ9Y4C1 1321 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 FAM47AQ5JRC9 791 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 ATG16L1Q676U5 607 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 MAP7D3Q8IWC1 876 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 TGFBRAP1Q8WUH2 860 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 KLHL29Q96CT2 875 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 JPH2Q9BR39 696 aaPredicted RBP6.53□□□□□ -1.36
RFX3-212ENST00000617270 N4BP1O75113 896 aaKnown RBP6.53□□□□□ -1.36
RFX3-212ENST00000617270 OCRLQ01968 901 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 DMP1Q13316 513 aaPredicted RBP6.53□□□□□ -1.36
RFX3-212ENST00000617270 TRIML2Q8N7C3 387 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 DYDC2Q96IM9 177 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 MIS12Q9H081 205 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 HACD3Q9P035 362 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 THRAP3Q9Y2W1 955 aaKnown RBP6.53□□□□□ -1.36
RFX3-212ENST00000617270 ANKRD36BQ8N2N9 1353 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 PLCH2O75038 1416 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 PSDA5PKW4 1024 aaPredicted RBP6.53□□□□□ -1.36
RFX3-212ENST00000617270 LRRIQ4A6NIV6 560 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 PCYT1AP49585 367 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 TRAPPC3LQ5T215 181 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 XAGE2Q96GT9 111 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 MED4Q9NPJ6 270 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 TRPC5Q9UL62 973 aaPredicted RBP6.53□□□□□ -1.36
RFX3-212ENST00000617270 MAST3O60307 1309 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 ADGRF5Q8IZF2 1346 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 POLR2BP30876 1174 aaKnown RBP6.53□□□□□ -1.36
RFX3-212ENST00000617270 LMNB2Q03252 620 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 AKAP4Q5JQC9 854 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 BBS5Q8N3I7 341 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.53□□□□□ -1.36
RFX3-212ENST00000617270 ZFYVE19Q96K21 471 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 TRAIPQ9BWF2 469 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 NEUROG2Q9H2A3 272 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 IL2RBP14784 551 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 MSH2P43246 934 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 BASP1P80723 227 aaKnown RBP6.53□□□□□ -1.36
RFX3-212ENST00000617270 UBE3AQ05086 875 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 RNASELQ05823 741 aaKnown RBP6.53□□□□□ -1.36
RFX3-212ENST00000617270 RINLQ6ZS11 566 aa6.53□□□□□ -1.36
RFX3-212ENST00000617270 PCGF5Q86SE9 256 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms