RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 PHACTR2O75167 634 aa17.1■□□□□ 0.33
NOP56-220ENST00000616692 PEX5LQ8IYB4 626 aa17.1■□□□□ 0.33
NOP56-220ENST00000616692 HMMRO75330 724 aa17.1■□□□□ 0.33
NOP56-220ENST00000616692 SLC43A3Q8NBI5 491 aa17.1■□□□□ 0.33
NOP56-220ENST00000616692 CNOT7Q9UIV1 285 aaKnown RBP17.1■□□□□ 0.33
NOP56-220ENST00000616692 HOOK1Q9UJC3 728 aaKnown RBP17.1■□□□□ 0.33
NOP56-220ENST00000616692 A6NHS1 94 aa17.09■□□□□ 0.33
NOP56-220ENST00000616692 EIF2S2P20042 333 aaKnown RBP17.09■□□□□ 0.33
NOP56-220ENST00000616692 ETF1P62495 437 aaKnown RBP17.09■□□□□ 0.33
NOP56-220ENST00000616692 PROSER3Q2NL68 480 aa17.09■□□□□ 0.33
NOP56-220ENST00000616692 GJC2Q5T442 439 aaPredicted RBP17.09■□□□□ 0.33
NOP56-220ENST00000616692 NANOGNBQ7Z5D8 188 aa17.09■□□□□ 0.33
NOP56-220ENST00000616692 HELLSQ9NRZ9 838 aa17.09■□□□□ 0.33
NOP56-220ENST00000616692 TFIP11Q9UBB9 837 aaKnown RBP17.09■□□□□ 0.33
NOP56-220ENST00000616692 GMEB1Q9Y692 573 aa17.09■□□□□ 0.33
NOP56-220ENST00000616692 PPP1R15BQ5SWA1 713 aa17.09■□□□□ 0.33
NOP56-220ENST00000616692 TBC1D9Q6ZT07 1266 aa17.09■□□□□ 0.33
NOP56-220ENST00000616692 YTHDF3Q7Z739 585 aaKnown RBP17.09■□□□□ 0.33
NOP56-220ENST00000616692 CATIPQ7Z7H3 387 aa17.09■□□□□ 0.33
NOP56-220ENST00000616692 ANKK1Q8NFD2 765 aa17.09■□□□□ 0.33
NOP56-220ENST00000616692 NSMCE1Q8WV22 266 aa17.09■□□□□ 0.33
NOP56-220ENST00000616692 ZNHIT6Q9NWK9 470 aaKnown RBP17.09■□□□□ 0.33
NOP56-220ENST00000616692 GALNT8Q9NY28 637 aa17.09■□□□□ 0.33
NOP56-220ENST00000616692 MAGEC2Q9UBF1 373 aaPredicted RBP17.09■□□□□ 0.33
NOP56-220ENST00000616692 RNF40O75150 1001 aa17.08■□□□□ 0.33
NOP56-220ENST00000616692 URI1O94763 535 aaPredicted RBP17.08■□□□□ 0.33
NOP56-220ENST00000616692 HOXD11P31277 338 aaPredicted RBP17.08■□□□□ 0.33
NOP56-220ENST00000616692 MLLT1Q03111 559 aaPredicted RBP17.08■□□□□ 0.33
NOP56-220ENST00000616692 PDE4BQ07343 736 aa17.08■□□□□ 0.33
NOP56-220ENST00000616692 RCN1Q15293 331 aa17.08■□□□□ 0.33
NOP56-220ENST00000616692 ACCSLQ4AC99 568 aa17.08■□□□□ 0.33
NOP56-220ENST00000616692 CCDC38Q502W7 563 aa17.08■□□□□ 0.33
NOP56-220ENST00000616692 LCA5Q86VQ0 697 aa17.08■□□□□ 0.33
NOP56-220ENST00000616692 EXOC1Q9NV70 894 aa17.08■□□□□ 0.33
NOP56-220ENST00000616692 HYPKQ9NX55 129 aa17.08■□□□□ 0.33
NOP56-220ENST00000616692 PAIP2BQ9ULR5 123 aaKnown RBP17.08■□□□□ 0.33
NOP56-220ENST00000616692 COPB2P35606 906 aa17.08■□□□□ 0.32
NOP56-220ENST00000616692 TXLNAP40222 546 aa17.08■□□□□ 0.32
NOP56-220ENST00000616692 HIRAP54198 1017 aaPredicted RBP17.08■□□□□ 0.32
NOP56-220ENST00000616692 CBX3Q13185 183 aa17.08■□□□□ 0.32
NOP56-220ENST00000616692 NUGGCQ68CJ6 796 aa17.08■□□□□ 0.32
NOP56-220ENST00000616692 CYB5D1Q6P9G0 228 aa17.08■□□□□ 0.32
NOP56-220ENST00000616692 CCDC73Q6ZRK6 1079 aa17.08■□□□□ 0.32
NOP56-220ENST00000616692 BCAS4Q8TDM0 211 aa17.08■□□□□ 0.32
NOP56-220ENST00000616692 GLIS2Q9BZE0 524 aaPredicted RBP17.08■□□□□ 0.32
NOP56-220ENST00000616692 SLC7A5P2Q9GIP4 190 aa17.08■□□□□ 0.32
NOP56-220ENST00000616692 DBF4Q9UBU7 674 aaPredicted RBP17.08■□□□□ 0.32
NOP56-220ENST00000616692 RPAP1Q9BWH6 1393 aaPredicted RBP17.08■□□□□ 0.32
NOP56-220ENST00000616692 HOXD10P28358 340 aa17.07■□□□□ 0.32
NOP56-220ENST00000616692 GNAQP50148 359 aa17.07■□□□□ 0.32
NOP56-220ENST00000616692 HDLBPQ00341 1268 aaKnown RBP17.07■□□□□ 0.32
NOP56-220ENST00000616692 ADAMTS8Q9UP79 889 aa17.07■□□□□ 0.32
NOP56-220ENST00000616692 LSM1O15116 133 aaKnown RBP17.07■□□□□ 0.32
NOP56-220ENST00000616692 ATP4AP20648 1035 aa17.07■□□□□ 0.32
NOP56-220ENST00000616692 USP5P45974 858 aa17.07■□□□□ 0.32
NOP56-220ENST00000616692 TSR1Q2NL82 804 aaKnown RBP17.07■□□□□ 0.32
NOP56-220ENST00000616692 PABPC1LQ4VXU2 614 aaKnown RBP17.07■□□□□ 0.32
NOP56-220ENST00000616692 E4F1Q66K89 784 aaPredicted RBP17.07■□□□□ 0.32
NOP56-220ENST00000616692 CCDC13Q8IYE1 715 aa17.07■□□□□ 0.32
NOP56-220ENST00000616692 ZBTB8BQ8NAP8 495 aaPredicted RBP17.07■□□□□ 0.32
NOP56-220ENST00000616692 OSBPL10Q9BXB5 764 aa17.07■□□□□ 0.32
NOP56-220ENST00000616692 GBP3Q9H0R5 595 aa17.07■□□□□ 0.32
NOP56-220ENST00000616692 YDJCA8MPS7 323 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 ATP5JP18859 108 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 IRAK1P51617 712 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 BLMHQ13867 455 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 WASHC4Q2M389 1173 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 GOLGA1Q92805 767 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 OXCT2Q9BYC2 517 aaPredicted RBP17.06■□□□□ 0.32
NOP56-220ENST00000616692 EBF2Q9HAK2 575 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 CROTQ9UKG9 612 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 L1RE1Q9UN81 338 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 BOLA2-SMG1P6H3BVE0 249 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 MGRN1O60291 552 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 AOC2O75106 756 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 IFFO1Q0D2I5 559 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 LARP1BQ659C4 914 aaKnown RBP17.06■□□□□ 0.32
NOP56-220ENST00000616692 ANKRD13DQ6ZTN6 518 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 MICALL2Q8IY33 904 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 MYO1HQ8N1T3 1032 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 SEZ6LQ9BYH1 1024 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 CBX8Q9HC52 389 aa17.06■□□□□ 0.32
NOP56-220ENST00000616692 DYTNA2CJ06 578 aa17.05■□□□□ 0.32
NOP56-220ENST00000616692 BIN1O00499 593 aa17.05■□□□□ 0.32
NOP56-220ENST00000616692 GFPT2O94808 682 aa17.05■□□□□ 0.32
NOP56-220ENST00000616692 USP11P51784 963 aa17.05■□□□□ 0.32
NOP56-220ENST00000616692 PHEXP78562 749 aa17.05■□□□□ 0.32
NOP56-220ENST00000616692 NCCRP1Q6ZVX7 275 aaPredicted RBP17.05■□□□□ 0.32
NOP56-220ENST00000616692 SLC15A3Q8IY34 581 aa17.05■□□□□ 0.32
NOP56-220ENST00000616692 SMARCC2Q8TAQ2 1214 aa17.05■□□□□ 0.32
NOP56-220ENST00000616692 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
NOP56-220ENST00000616692 PCDH18Q9HCL0 1135 aa17.05■□□□□ 0.32
NOP56-220ENST00000616692 RAD17O75943 681 aa17.05■□□□□ 0.32
NOP56-220ENST00000616692 FMR1Q06787 632 aaKnown RBP eCLIP17.05■□□□□ 0.32
NOP56-220ENST00000616692 ATF7IPQ6VMQ6 1270 aa17.05■□□□□ 0.32
NOP56-220ENST00000616692 RASSF8Q8NHQ8 419 aa17.05■□□□□ 0.32
NOP56-220ENST00000616692 TRPM4Q8TD43 1214 aa17.05■□□□□ 0.32
NOP56-220ENST00000616692 SH3GL1Q99961 368 aa17.05■□□□□ 0.32
NOP56-220ENST00000616692 SLC39A3Q9BRY0 314 aa17.05■□□□□ 0.32
NOP56-220ENST00000616692 PREBQ9HCU5 417 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms