RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CNNM2Q9H8M5 875 aa14.64□□□□□ -0.07
MSH6-214ENST00000616033 AFDNP55196 1824 aaKnown RBP14.64□□□□□ -0.07
MSH6-214ENST00000616033 IRS4O14654 1257 aaPredicted RBP14.64□□□□□ -0.07
MSH6-214ENST00000616033 CEP85LQ5SZL2 805 aa14.64□□□□□ -0.07
MSH6-214ENST00000616033 ZNF658Q5TYW1 1059 aaPredicted RBP14.64□□□□□ -0.07
MSH6-214ENST00000616033 CABS1Q96KC9 395 aa14.64□□□□□ -0.07
MSH6-214ENST00000616033 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.64□□□□□ -0.07
MSH6-214ENST00000616033 GOLGA6L7A0A1B0GV03 622 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 PSMA7O14818 248 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 DNAJC10Q8IXB1 793 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 CCDC155Q8N6L0 562 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 GTPBP6O43824 516 aaPredicted RBP14.63□□□□□ -0.07
MSH6-214ENST00000616033 EIF4A3P38919 411 aaKnown RBP14.63□□□□□ -0.07
MSH6-214ENST00000616033 VAV2P52735 878 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 ASIC1P78348 528 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 UBE3CQ15386 1083 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 IL17AQ16552 155 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 ZCRB1Q8TBF4 217 aaKnown RBP14.63□□□□□ -0.07
MSH6-214ENST00000616033 KRT12Q99456 494 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 GOLPH3Q9H4A6 298 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 EXOC1Q9NV70 894 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 GRIN2DO15399 1336 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 OVOS2A0A0G2JMS6 1433 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 MST1RQ04912 1400 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 HEXIM1O94992 359 aaKnown RBP14.63□□□□□ -0.07
MSH6-214ENST00000616033 FCER1AP12319 257 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 PDE4DQ08499 809 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 TRIM14Q14142 442 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 NAA25Q14CX7 972 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 PAPD7Q5XG87 772 aaKnown RBP14.63□□□□□ -0.07
MSH6-214ENST00000616033 POTEDQ86YR6 584 aa14.63□□□□□ -0.07
MSH6-214ENST00000616033 CNOT6LQ96LI5 555 aaKnown RBP14.63□□□□□ -0.07
MSH6-214ENST00000616033 NWD2Q9ULI1 1742 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 LGALS16A8MUM7 142 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 PDE8BO95263 885 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 MAGEA1P43355 309 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 DYNLL1P63167 89 aaKnown RBP14.62□□□□□ -0.07
MSH6-214ENST00000616033 CACNA2D4Q7Z3S7 1137 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 EHBP1Q8NDI1 1231 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 FERMT2Q96AC1 680 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 OSBPL9Q96SU4 736 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 SLC39A2Q9NP94 309 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 RIPOR2Q9Y4F9 1068 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 SRCAPQ6ZRS2 3230 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 WTIPA6NIX2 430 aaPredicted RBP14.62□□□□□ -0.07
MSH6-214ENST00000616033 ZNF263O14978 683 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 NFAT5O94916 1531 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 MYBL1P10243 752 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 ADAMTSL3P82987 1691 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 GFPT1Q06210 699 aaPredicted RBP14.62□□□□□ -0.07
MSH6-214ENST00000616033 PKN1Q16512 942 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 CREG2Q8IUH2 290 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 TBC1D31Q96DN5 1066 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 BTG4Q9NY30 223 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 MED1Q15648 1581 aaPredicted RBP14.62□□□□□ -0.07
MSH6-214ENST00000616033 MRC1P22897 1456 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 ITIH6Q6UXX5 1313 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 GOLGA8KD6RF30 607 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 H7C1D1 291 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 HGSO14964 777 aaPredicted RBP14.62□□□□□ -0.07
MSH6-214ENST00000616033 GLI1P08151 1106 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 TMOD1P28289 359 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 DYMQ7RTS9 669 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 SH3RF1Q7Z6J0 888 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 ENAHQ8N8S7 591 aaPredicted RBP14.62□□□□□ -0.07
MSH6-214ENST00000616033 PIK3R5Q8WYR1 880 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 ESR2Q92731 530 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 CPVLQ9H3G5 476 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 STIM2Q9P246 746 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 SNX12Q9UMY4 172 aa14.62□□□□□ -0.07
MSH6-214ENST00000616033 SMIM23A6NLE4 172 aa14.61□□□□□ -0.07
MSH6-214ENST00000616033 LSP1P33241 339 aa14.61□□□□□ -0.07
MSH6-214ENST00000616033 SUGP1Q8IWZ8 645 aaKnown RBP14.61□□□□□ -0.07
MSH6-214ENST00000616033 AMOTL1Q8IY63 956 aa14.61□□□□□ -0.07
MSH6-214ENST00000616033 AENQ8WTP8 325 aaKnown RBP14.61□□□□□ -0.07
MSH6-214ENST00000616033 CAPN11Q9UMQ6 739 aa14.61□□□□□ -0.07
MSH6-214ENST00000616033 STK36Q9NRP7 1315 aa14.61□□□□□ -0.07
MSH6-214ENST00000616033 MPHOSPH10O00566 681 aaKnown RBP14.61□□□□□ -0.07
MSH6-214ENST00000616033 EPHB6O15197 1021 aa14.61□□□□□ -0.07
MSH6-214ENST00000616033 PDHBP11177 359 aa14.61□□□□□ -0.07
MSH6-214ENST00000616033 NF2P35240 595 aa14.61□□□□□ -0.07
MSH6-214ENST00000616033 DDX42Q86XP3 938 aaKnown RBP eCLIP14.61□□□□□ -0.07
MSH6-214ENST00000616033 TRIM31Q9BZY9 425 aa14.61□□□□□ -0.07
MSH6-214ENST00000616033 PCDHA13Q9Y5I0 950 aa14.61□□□□□ -0.07
MSH6-214ENST00000616033 INF2Q27J81 1249 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 NAA35Q5VZE5 725 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 B4GALNT4Q76KP1 1039 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.6□□□□□ -0.07
MSH6-214ENST00000616033 CEP89Q96ST8 783 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 WDR19Q8NEZ3 1342 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 MEFVO15553 781 aaPredicted RBP14.6□□□□□ -0.07
MSH6-214ENST00000616033 PCCAP05165 728 aaPredicted RBP14.6□□□□□ -0.07
MSH6-214ENST00000616033 NR1D1P20393 614 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 CDC25CP30307 473 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 DNM2P50570 870 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 EHHADHQ08426 723 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 PDXDC2PQ6P474 469 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 ALS2CR12Q96Q35 445 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 RMND1Q9NWS8 449 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 KIF11P52732 1056 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms