RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.57□□□□□ -0.4
ATF3-211ENST00000613954 GAKO14976 1311 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 SLX4Q8IY92 1834 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 A0A0U1RQJ8 604 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 TARSL2A2RTX5 802 aaKnown RBP12.57□□□□□ -0.4
ATF3-211ENST00000613954 SMIM22K7EJ46 135 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 PRPF3O43395 683 aaKnown RBP12.57□□□□□ -0.4
ATF3-211ENST00000613954 CKAP4Q07065 602 aaKnown RBP12.57□□□□□ -0.4
ATF3-211ENST00000613954 DOK7Q18PE1 504 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 CCDC82Q8N4S0 544 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 C7orf43Q8WVR3 580 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 ATRIPQ8WXE1 791 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 MCM9Q9NXL9 1143 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 EPN1Q9Y6I3 576 aaPredicted RBP12.57□□□□□ -0.4
ATF3-211ENST00000613954 VGLL3A8MV65 326 aa12.56□□□□□ -0.4
ATF3-211ENST00000613954 GTPBP6O43824 516 aaPredicted RBP12.56□□□□□ -0.4
ATF3-211ENST00000613954 KRT9P35527 623 aa12.56□□□□□ -0.4
ATF3-211ENST00000613954 CCT6AP40227 531 aaKnown RBP12.56□□□□□ -0.4
ATF3-211ENST00000613954 NT5C2P49902 561 aa12.56□□□□□ -0.4
ATF3-211ENST00000613954 TSR1Q2NL82 804 aaKnown RBP12.56□□□□□ -0.4
ATF3-211ENST00000613954 TCP11X2Q5H9J9 407 aa12.56□□□□□ -0.4
ATF3-211ENST00000613954 RRAGBQ5VZM2 374 aa12.56□□□□□ -0.4
ATF3-211ENST00000613954 ZNF662Q6ZS27 426 aa12.56□□□□□ -0.4
ATF3-211ENST00000613954 TRAPPC11Q7Z392 1133 aa12.56□□□□□ -0.4
ATF3-211ENST00000613954 PODNQ7Z5L7 613 aa12.56□□□□□ -0.4
ATF3-211ENST00000613954 AMOTL1Q8IY63 956 aa12.56□□□□□ -0.4
ATF3-211ENST00000613954 ZKSCAN3Q9BRR0 538 aa12.56□□□□□ -0.4
ATF3-211ENST00000613954 RSPH14Q9UHP6 348 aa12.56□□□□□ -0.4
ATF3-211ENST00000613954 KCNJ18B7U540 433 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 N4BP1O75113 896 aaKnown RBP12.55□□□□□ -0.4
ATF3-211ENST00000613954 NDUFA10O95299 355 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 USP17L8P0C7I0 530 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 CALM1P0DP23 149 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 CALM2P0DP24 149 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 CALM3P0DP25 149 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 CYP2D6P10635 497 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 TRAPPC10P48553 1259 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 USP14P54578 494 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 ATP2C1P98194 919 aaPredicted RBP12.55□□□□□ -0.4
ATF3-211ENST00000613954 KCNJ12Q14500 433 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 ZNF658Q5TYW1 1059 aaPredicted RBP12.55□□□□□ -0.4
ATF3-211ENST00000613954 C12orf60Q5U649 245 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 SMYD4Q8IYR2 804 aaPredicted RBP12.55□□□□□ -0.4
ATF3-211ENST00000613954 TGFBRAP1Q8WUH2 860 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 ZSCAN10Q96SZ4 725 aaPredicted RBP12.55□□□□□ -0.4
ATF3-211ENST00000613954 SLF1Q9BQI6 1058 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 SUGCTQ9HAC7 445 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 ZNF219Q9P2Y4 722 aaPredicted RBP12.55□□□□□ -0.4
ATF3-211ENST00000613954 LCMT1Q9UIC8 334 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 NAV1Q8NEY1 1877 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 A0A1W2PQC6 194 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 H7C1D1 291 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 MAGEA9P43362 315 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 KRT83P78385 493 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 SEMA3FQ13275 785 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 SEC23AQ15436 765 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 TTC38Q5R3I4 469 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 IQCA1Q86XH1 822 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 TEX11Q8IYF3 940 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 CMTR1Q8N1G2 835 aaKnown RBP12.55□□□□□ -0.4
ATF3-211ENST00000613954 NOA1Q8NC60 698 aaKnown RBP12.55□□□□□ -0.4
ATF3-211ENST00000613954 OR8K1Q8NGG5 319 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 AFAP1L1Q8TED9 768 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 VPS16Q9H269 839 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 FAM204AQ9H8W3 233 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 VPS54Q9P1Q0 977 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 SAR1BQ9Y6B6 198 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 TNKSO95271 1327 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 ROBO3Q96MS0 1386 aa12.55□□□□□ -0.4
ATF3-211ENST00000613954 LRRIQ3A6PVS8 624 aaPredicted RBP12.54□□□□□ -0.4
ATF3-211ENST00000613954 TRIM66O15016 1216 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 PRDM1O75626 825 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 E2F4Q16254 413 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 PKN1Q16512 942 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 GRIPAP1Q4V328 841 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 IQCEQ6IPM2 695 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 CATIPQ7Z7H3 387 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 CERS5Q8N5B7 392 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 SUPT20HQ8NEM7 779 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 NELFBQ8WX92 580 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 DAGLAQ9Y4D2 1042 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 DLEC1Q9Y238 1755 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 KRT86O43790 486 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 RNF40O75150 1001 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 PPFIA4O75335 1185 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 CASP1P29466 404 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 RHBDL3P58872 404 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 EVX2Q03828 476 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 UBXN1Q04323 297 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 PAPD7Q5XG87 772 aaKnown RBP12.54□□□□□ -0.4
ATF3-211ENST00000613954 WWC2Q6AWC2 1192 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 NCAPH2Q6IBW4 605 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 MAPKAPK5Q8IW41 473 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 ENAHQ8N8S7 591 aaPredicted RBP12.54□□□□□ -0.4
ATF3-211ENST00000613954 DNAJC7Q99615 494 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 FAM107BQ9H098 131 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 DBNDD1Q9H9R9 158 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 TAB2Q9NYJ8 693 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 GUCA1BQ9UMX6 200 aa12.54□□□□□ -0.4
ATF3-211ENST00000613954 LUC7L2Q9Y383 392 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms