RNA–Protein interactions for RNA: ENST00000613953.4

TPI1-210, Transcript of triosephosphate isomerase 1, humanhuman

TSL 1 (best) BASIC

Gene TPI1, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPI1-210ENST00000613953 TRIM43Q96BQ3 446 aaPredicted RBP27.75■■■□□ 2.03
TPI1-210ENST00000613953 SPC25Q9HBM1 224 aa27.75■■■□□ 2.03
TPI1-210ENST00000613953 GPCPD1Q9NPB8 672 aa27.75■■■□□ 2.03
TPI1-210ENST00000613953 STARD7Q9NQZ5 370 aa27.75■■■□□ 2.03
TPI1-210ENST00000613953 MCM3APO60318 1980 aa27.75■■■□□ 2.03
TPI1-210ENST00000613953 CLTBP09497 229 aa27.74■■■□□ 2.03
TPI1-210ENST00000613953 SNHG28P0DPA3 235 aa27.74■■■□□ 2.03
TPI1-210ENST00000613953 GJA9P57773 515 aa27.74■■■□□ 2.03
TPI1-210ENST00000613953 BADQ92934 168 aa27.74■■■□□ 2.03
TPI1-210ENST00000613953 LAMA4Q16363 1823 aa27.74■■■□□ 2.03
TPI1-210ENST00000613953 PQBP1O60828 265 aaKnown RBP27.73■■■□□ 2.03
TPI1-210ENST00000613953 ZNF543Q08ER8 600 aa27.73■■■□□ 2.03
TPI1-210ENST00000613953 NSMFQ6X4W1 530 aa27.73■■■□□ 2.03
TPI1-210ENST00000613953 PCSK9Q8NBP7 692 aaKnown RBP27.73■■■□□ 2.03
TPI1-210ENST00000613953 DSCC1Q9BVC3 393 aa27.73■■■□□ 2.03
TPI1-210ENST00000613953 IRX5P78411 483 aaPredicted RBP27.72■■■□□ 2.03
TPI1-210ENST00000613953 ANKRD33Q7Z3H0 272 aa27.72■■■□□ 2.03
TPI1-210ENST00000613953 DGKHQ86XP1 1220 aa27.71■■■□□ 2.03
TPI1-210ENST00000613953 DEFB123Q8N688 67 aa27.71■■■□□ 2.03
TPI1-210ENST00000613953 GLT1D1Q96MS3 346 aa27.71■■■□□ 2.03
TPI1-210ENST00000613953 TOX2Q96NM4 488 aa27.71■■■□□ 2.03
TPI1-210ENST00000613953 ZKSCAN3Q9BRR0 538 aa27.71■■■□□ 2.03
TPI1-210ENST00000613953 ELP1O95163 1332 aa27.71■■■□□ 2.03
TPI1-210ENST00000613953 ASGR1P07306 291 aa27.7■■■□□ 2.03
TPI1-210ENST00000613953 PDE4AP27815 886 aa27.7■■■□□ 2.03
TPI1-210ENST00000613953 NKX3-2P78367 333 aa27.7■■■□□ 2.03
TPI1-210ENST00000613953 TNFAIP2Q03169 654 aa27.7■■■□□ 2.03
TPI1-210ENST00000613953 PNMA2Q9UL42 364 aa27.7■■■□□ 2.03
TPI1-210ENST00000613953 LRRC37A2A6NM11 1700 aa27.7■■■□□ 2.03
TPI1-210ENST00000613953 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.7■■■□□ 2.02
TPI1-210ENST00000613953 NFIBO00712 420 aa27.7■■■□□ 2.02
TPI1-210ENST00000613953 KIAA0355O15063 1070 aa27.7■■■□□ 2.02
TPI1-210ENST00000613953 CTAGE5O15320 804 aa27.7■■■□□ 2.02
TPI1-210ENST00000613953 KDM4AO75164 1064 aa27.7■■■□□ 2.02
TPI1-210ENST00000613953 GNASQ5JWF2 1037 aa27.7■■■□□ 2.02
TPI1-210ENST00000613953 IQCA1Q86XH1 822 aa27.7■■■□□ 2.02
TPI1-210ENST00000613953 DDX49Q9Y6V7 483 aaKnown RBP27.7■■■□□ 2.02
TPI1-210ENST00000613953 ITGB8P26012 769 aa27.69■■■□□ 2.02
TPI1-210ENST00000613953 BAATQ14032 418 aaPredicted RBP27.69■■■□□ 2.02
TPI1-210ENST00000613953 IMMTQ16891 758 aaKnown RBP27.69■■■□□ 2.02
TPI1-210ENST00000613953 CCDC178Q5BJE1 867 aa27.69■■■□□ 2.02
TPI1-210ENST00000613953 GPATCH4Q5T3I0 446 aaKnown RBP27.69■■■□□ 2.02
TPI1-210ENST00000613953 Q7L0L9 218 aa27.69■■■□□ 2.02
TPI1-210ENST00000613953 PURBQ96QR8 312 aaKnown RBP27.69■■■□□ 2.02
TPI1-210ENST00000613953 CTNNA3Q9UI47 895 aa27.69■■■□□ 2.02
TPI1-210ENST00000613953 DCDC2CA8MYV0 355 aa27.68■■■□□ 2.02
TPI1-210ENST00000613953 GSPT1P15170 499 aaKnown RBP27.68■■■□□ 2.02
TPI1-210ENST00000613953 FAAP100Q0VG06 881 aa27.68■■■□□ 2.02
TPI1-210ENST00000613953 NOL8Q76FK4 1167 aaKnown RBP27.68■■■□□ 2.02
TPI1-210ENST00000613953 MORC4Q8TE76 937 aa27.68■■■□□ 2.02
TPI1-210ENST00000613953 TMEM39AQ9NV64 488 aa27.68■■■□□ 2.02
TPI1-210ENST00000613953 GNEQ9Y223 722 aaKnown RBP27.68■■■□□ 2.02
TPI1-210ENST00000613953 WDR19Q8NEZ3 1342 aa27.67■■■□□ 2.02
TPI1-210ENST00000613953 B4E1Z4 1266 aa27.67■■■□□ 2.02
TPI1-210ENST00000613953 SHHQ15465 462 aa27.67■■■□□ 2.02
TPI1-210ENST00000613953 C9orf50Q5SZB4 431 aa27.67■■■□□ 2.02
TPI1-210ENST00000613953 TTC22Q5TAA0 569 aa27.67■■■□□ 2.02
TPI1-210ENST00000613953 FBXO16Q8IX29 292 aaPredicted RBP27.67■■■□□ 2.02
TPI1-210ENST00000613953 PNMA1Q8ND90 353 aa27.67■■■□□ 2.02
TPI1-210ENST00000613953 CLEC4DQ8WXI8 215 aa27.67■■■□□ 2.02
TPI1-210ENST00000613953 IL25Q9H293 177 aa27.67■■■□□ 2.02
TPI1-210ENST00000613953 ADD3Q9UEY8 706 aaKnown RBP27.67■■■□□ 2.02
TPI1-210ENST00000613953 MROH7Q68CQ1 1323 aa27.67■■■□□ 2.02
TPI1-210ENST00000613953 LCTP09848 1927 aa27.66■■■□□ 2.02
TPI1-210ENST00000613953 RAG1P15918 1043 aa27.66■■■□□ 2.02
TPI1-210ENST00000613953 TAPT1Q6NXT6 567 aa27.66■■■□□ 2.02
TPI1-210ENST00000613953 TLK2Q86UE8 772 aa27.66■■■□□ 2.02
TPI1-210ENST00000613953 ANKS1AQ92625 1134 aa27.66■■■□□ 2.02
TPI1-210ENST00000613953 ZSCAN10Q96SZ4 725 aaPredicted RBP27.66■■■□□ 2.02
TPI1-210ENST00000613953 VTA1Q9NP79 307 aa27.66■■■□□ 2.02
TPI1-210ENST00000613953 LOC102724159A0A0B4J2E5 919 aa27.65■■■□□ 2.02
TPI1-210ENST00000613953 A0A0U1RQG5 324 aaPredicted RBP27.65■■■□□ 2.02
TPI1-210ENST00000613953 PTPDC1A2A3K4 754 aa27.65■■■□□ 2.02
TPI1-210ENST00000613953 GOLGA8HP0CJ92 632 aa27.65■■■□□ 2.02
TPI1-210ENST00000613953 SMPD1P17405 629 aa27.65■■■□□ 2.02
TPI1-210ENST00000613953 PWP2Q15269 919 aaKnown RBP27.65■■■□□ 2.02
TPI1-210ENST00000613953 EEPD1Q7L9B9 569 aa27.65■■■□□ 2.02
TPI1-210ENST00000613953 KAT14Q9H8E8 782 aa27.65■■■□□ 2.02
TPI1-210ENST00000613953 PDGFCQ9NRA1 345 aa27.65■■■□□ 2.02
TPI1-210ENST00000613953 ZSWIM5Q9P217 1185 aa27.65■■■□□ 2.02
TPI1-210ENST00000613953 CDK7P50613 346 aa27.64■■■□□ 2.02
TPI1-210ENST00000613953 ALDH5A1P51649 535 aaPredicted RBP27.64■■■□□ 2.02
TPI1-210ENST00000613953 BEX3Q00994 111 aa27.64■■■□□ 2.02
TPI1-210ENST00000613953 IQSEC1Q6DN90 963 aa27.64■■■□□ 2.02
TPI1-210ENST00000613953 SLC30A10Q6XR72 485 aa27.64■■■□□ 2.02
TPI1-210ENST00000613953 ENAHQ8N8S7 591 aaPredicted RBP27.64■■■□□ 2.02
TPI1-210ENST00000613953 VTI1AQ96AJ9 217 aa27.64■■■□□ 2.02
TPI1-210ENST00000613953 KRT23Q9C075 422 aa27.64■■■□□ 2.02
TPI1-210ENST00000613953 CNNM2Q9H8M5 875 aa27.64■■■□□ 2.02
TPI1-210ENST00000613953 MTMR10Q9NXD2 777 aa27.64■■■□□ 2.02
TPI1-210ENST00000613953 A0A0C4DFX4 3053 aa27.64■■■□□ 2.01
TPI1-210ENST00000613953 FSCN1Q16658 493 aaKnown RBP27.64■■■□□ 2.01
TPI1-210ENST00000613953 TBX21Q9UL17 535 aa27.64■■■□□ 2.01
TPI1-210ENST00000613953 TNKSO95271 1327 aa27.63■■■□□ 2.01
TPI1-210ENST00000613953 RAD50Q92878 1312 aa27.63■■■□□ 2.01
TPI1-210ENST00000613953 ARVCFO00192 962 aa27.63■■■□□ 2.01
TPI1-210ENST00000613953 IRX6P78412 446 aaPredicted RBP27.63■■■□□ 2.01
TPI1-210ENST00000613953 FAM109BQ6ICB4 259 aaPredicted RBP27.63■■■□□ 2.01
TPI1-210ENST00000613953 RNF207Q6ZRF8 634 aa27.63■■■□□ 2.01
TPI1-210ENST00000613953 AP5M1Q9H0R1 490 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms