RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ALG1Q9BT22 464 aa13.21□□□□□ -0.29
SLIRP-212ENST00000613856 RIOX1Q9H6W3 641 aa13.21□□□□□ -0.29
SLIRP-212ENST00000613856 MTMR7Q9Y216 660 aa13.21□□□□□ -0.29
SLIRP-212ENST00000613856 MTMR6Q9Y217 621 aa13.21□□□□□ -0.29
SLIRP-212ENST00000613856 ZDHHC9Q9Y397 364 aa13.21□□□□□ -0.29
SLIRP-212ENST00000613856 PFASO15067 1338 aa13.2□□□□□ -0.3
SLIRP-212ENST00000613856 FRMPD2Q68DX3 1309 aaPredicted RBP13.2□□□□□ -0.3
SLIRP-212ENST00000613856 SPTBN5Q9NRC6 3674 aaKnown RBP13.2□□□□□ -0.3
SLIRP-212ENST00000613856 CYTH3O43739 400 aa13.2□□□□□ -0.3
SLIRP-212ENST00000613856 DTNBO60941 627 aa13.2□□□□□ -0.3
SLIRP-212ENST00000613856 GOLGA8HP0CJ92 632 aa13.2□□□□□ -0.3
SLIRP-212ENST00000613856 ZSCAN22P10073 491 aaPredicted RBP13.2□□□□□ -0.3
SLIRP-212ENST00000613856 USP14P54578 494 aa13.2□□□□□ -0.3
SLIRP-212ENST00000613856 PKN1Q16512 942 aa13.2□□□□□ -0.3
SLIRP-212ENST00000613856 LRIT3Q3SXY7 679 aa13.2□□□□□ -0.3
SLIRP-212ENST00000613856 CMTR1Q8N1G2 835 aaKnown RBP13.2□□□□□ -0.3
SLIRP-212ENST00000613856 SMCR8Q8TEV9 937 aaPredicted RBP13.2□□□□□ -0.3
SLIRP-212ENST00000613856 LPAR1Q92633 364 aa13.2□□□□□ -0.3
SLIRP-212ENST00000613856 C8orf76Q96K31 380 aa13.2□□□□□ -0.3
SLIRP-212ENST00000613856 FEZ1Q99689 392 aa13.2□□□□□ -0.3
SLIRP-212ENST00000613856 CDH23Q9H251 3354 aa13.19□□□□□ -0.3
SLIRP-212ENST00000613856 USP17L10C9JJH3 530 aa13.19□□□□□ -0.3
SLIRP-212ENST00000613856 WDR46O15213 610 aaKnown RBP13.19□□□□□ -0.3
SLIRP-212ENST00000613856 PLA2G6O60733 806 aa13.19□□□□□ -0.3
SLIRP-212ENST00000613856 PPFIA3O75145 1194 aa13.19□□□□□ -0.3
SLIRP-212ENST00000613856 BMP3P12645 472 aa13.19□□□□□ -0.3
SLIRP-212ENST00000613856 PFKFB3Q16875 520 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-212ENST00000613856 BTNL9Q6UXG8 535 aa13.19□□□□□ -0.3
SLIRP-212ENST00000613856 TDHQ8IZJ6 230 aa13.19□□□□□ -0.3
SLIRP-212ENST00000613856 CCDC82Q8N4S0 544 aa13.19□□□□□ -0.3
SLIRP-212ENST00000613856 ZNF280CQ8ND82 737 aa13.19□□□□□ -0.3
SLIRP-212ENST00000613856 FBXO18Q8NFZ0 1043 aa13.19□□□□□ -0.3
SLIRP-212ENST00000613856 MTMR8Q96EF0 704 aa13.19□□□□□ -0.3
SLIRP-212ENST00000613856 C12orf42Q96LP6 360 aa13.19□□□□□ -0.3
SLIRP-212ENST00000613856 FAM161BQ96MY7 647 aa13.19□□□□□ -0.3
SLIRP-212ENST00000613856 GUCD1Q96NT3 240 aa13.19□□□□□ -0.3
SLIRP-212ENST00000613856 RLFQ13129 1914 aa13.19□□□□□ -0.3
SLIRP-212ENST00000613856 TCHHQ07283 1943 aa13.18□□□□□ -0.3
SLIRP-212ENST00000613856 VPS37CA5D8V6 355 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-212ENST00000613856 C19orf81C9J6K1 198 aa13.18□□□□□ -0.3
SLIRP-212ENST00000613856 H3BQV1 296 aa13.18□□□□□ -0.3
SLIRP-212ENST00000613856 hCG_1984214I3L0E3 225 aa13.18□□□□□ -0.3
SLIRP-212ENST00000613856 F13A1P00488 732 aa13.18□□□□□ -0.3
SLIRP-212ENST00000613856 SCG2P13521 617 aa13.18□□□□□ -0.3
SLIRP-212ENST00000613856 BACE1P56817 501 aa13.18□□□□□ -0.3
SLIRP-212ENST00000613856 KIAA1755Q5JYT7 1200 aa13.18□□□□□ -0.3
SLIRP-212ENST00000613856 GPR153Q6NV75 609 aa13.18□□□□□ -0.3
SLIRP-212ENST00000613856 KCTD1Q719H9 257 aa13.18□□□□□ -0.3
SLIRP-212ENST00000613856 FASTKD5Q7L8L6 764 aaKnown RBP13.18□□□□□ -0.3
SLIRP-212ENST00000613856 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.18□□□□□ -0.3
SLIRP-212ENST00000613856 ZNF713Q8N859 430 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-212ENST00000613856 TRIB2Q92519 343 aa13.18□□□□□ -0.3
SLIRP-212ENST00000613856 RRP36Q96EU6 259 aaKnown RBP13.18□□□□□ -0.3
SLIRP-212ENST00000613856 AIFM3Q96NN9 605 aa13.18□□□□□ -0.3
SLIRP-212ENST00000613856 GPCPD1Q9NPB8 672 aa13.18□□□□□ -0.3
SLIRP-212ENST00000613856 GJD2Q9UKL4 321 aa13.18□□□□□ -0.3
SLIRP-212ENST00000613856 V9GY48 417 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-212ENST00000613856 HMGCRP04035 888 aa13.17□□□□□ -0.3
SLIRP-212ENST00000613856 XBP1P17861 261 aa13.17□□□□□ -0.3
SLIRP-212ENST00000613856 STAT2P52630 851 aa13.17□□□□□ -0.3
SLIRP-212ENST00000613856 MDM2Q00987 491 aaPredicted RBP13.17□□□□□ -0.3
SLIRP-212ENST00000613856 SPP2Q13103 211 aa13.17□□□□□ -0.3
SLIRP-212ENST00000613856 MTMR2Q13614 643 aa13.17□□□□□ -0.3
SLIRP-212ENST00000613856 TRIM29Q14134 588 aa13.17□□□□□ -0.3
SLIRP-212ENST00000613856 SH3D19Q5HYK7 790 aa13.17□□□□□ -0.3
SLIRP-212ENST00000613856 TTBK2Q6IQ55 1244 aa13.17□□□□□ -0.3
SLIRP-212ENST00000613856 CLEC17AQ6ZS10 378 aa13.17□□□□□ -0.3
SLIRP-212ENST00000613856 FAM160B2Q86V87 743 aa13.17□□□□□ -0.3
SLIRP-212ENST00000613856 TNPO1Q92973 898 aaKnown RBP13.17□□□□□ -0.3
SLIRP-212ENST00000613856 UBE2OQ9C0C9 1292 aaKnown RBP13.17□□□□□ -0.3
SLIRP-212ENST00000613856 UBA5Q9GZZ9 404 aa13.17□□□□□ -0.3
SLIRP-212ENST00000613856 C11orf49Q9H6J7 331 aa13.17□□□□□ -0.3
SLIRP-212ENST00000613856 SH3GLB2Q9NR46 395 aa13.17□□□□□ -0.3
SLIRP-212ENST00000613856 SEC63Q9UGP8 760 aaKnown RBP13.17□□□□□ -0.3
SLIRP-212ENST00000613856 AGTPBP1Q9UPW5 1226 aa13.17□□□□□ -0.3
SLIRP-212ENST00000613856 RAD21O60216 631 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 RESTQ13127 1097 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 ZYXQ15942 572 aaKnown RBP13.16□□□□□ -0.3
SLIRP-212ENST00000613856 FAM110CQ1W6H9 321 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 FAM83BQ5T0W9 1011 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 SYDE2Q5VT97 1194 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 KRT40Q6A162 431 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 ADGRF4Q8IZF3 695 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 SPICE1Q8N0Z3 855 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 COA7Q96BR5 231 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 NUP88Q99567 741 aaPredicted RBP13.16□□□□□ -0.3
SLIRP-212ENST00000613856 CPVLQ9H3G5 476 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 ZSCAN16Q9H4T2 348 aaPredicted RBP13.16□□□□□ -0.3
SLIRP-212ENST00000613856 JMJD4Q9H9V9 463 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 EMILIN3Q9NT22 766 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 FEM1BQ9UK73 627 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 SLC45A1Q9Y2W3 748 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 ATP6V1DQ9Y5K8 247 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 A0A0G2JMZ2 1700 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 LTBP2Q14767 1821 aa13.16□□□□□ -0.3
SLIRP-212ENST00000613856 PNMA6FA0A0J9YX94 578 aa13.15□□□□□ -0.3
SLIRP-212ENST00000613856 TMEM232C9JQI7 657 aa13.15□□□□□ -0.3
SLIRP-212ENST00000613856 ZBTB5O15062 677 aa13.15□□□□□ -0.3
SLIRP-212ENST00000613856 MMP1P03956 469 aa13.15□□□□□ -0.3
SLIRP-212ENST00000613856 VCAM1P19320 739 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms