RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	PWP2	Q15269	919 aa	Known RBP	13.15	□□□□□ -0.3
CBWD1-222	ENST00000613508	GNAS	Q5JWF2	1037 aa		13.15	□□□□□ -0.3
CBWD1-222	ENST00000613508	SEZ6L	Q9BYH1	1024 aa		13.15	□□□□□ -0.3
CBWD1-222	ENST00000613508	RANBP17	Q9H2T7	1088 aa	Known RBP	13.15	□□□□□ -0.3
CBWD1-222	ENST00000613508	SEMA6B	Q9H3T3	888 aa		13.15	□□□□□ -0.3
CBWD1-222	ENST00000613508	GNE	Q9Y223	722 aa	Known RBP	13.15	□□□□□ -0.3
CBWD1-222	ENST00000613508	MCM3AP	O60318	1980 aa		13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508		A0A0U1RQG5	324 aa	Predicted RBP	13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	ARVCF	O00192	962 aa		13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	CABYR	O75952	493 aa		13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	HSPD1	P10809	573 aa	Known RBP	13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	TOP1	P11387	765 aa	Known RBP	13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	NT5C2	P49902	561 aa		13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	IRX5	P78411	483 aa	Predicted RBP	13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	MUM1L1	Q5H9M0	696 aa		13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	MFSD5	Q6N075	450 aa		13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	SMC5	Q8IY18	1101 aa		13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	SLC43A3	Q8NBI5	491 aa		13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	RNPC3	Q96LT9	517 aa	Known RBP	13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	TTC14	Q96N46	770 aa		13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	PNMA2	Q9UL42	364 aa		13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	CCPG1	Q9ULG6	757 aa		13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	ISY1	Q9ULR0	285 aa	Known RBP	13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508		Q9Y3F1	56 aa		13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.14	□□□□□ -0.31
CBWD1-222	ENST00000613508	LRRC37A2	A6NM11	1700 aa		13.13	□□□□□ -0.31
CBWD1-222	ENST00000613508	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.13	□□□□□ -0.31
CBWD1-222	ENST00000613508	CD4	P01730	458 aa		13.13	□□□□□ -0.31
CBWD1-222	ENST00000613508	RASIP1	Q5U651	963 aa		13.13	□□□□□ -0.31
CBWD1-222	ENST00000613508	IQSEC1	Q6DN90	963 aa		13.13	□□□□□ -0.31
CBWD1-222	ENST00000613508	TAPT1	Q6NXT6	567 aa		13.13	□□□□□ -0.31
CBWD1-222	ENST00000613508	CCDC174	Q6PII3	467 aa		13.13	□□□□□ -0.31
CBWD1-222	ENST00000613508	RASGRP2	Q7LDG7	609 aa		13.13	□□□□□ -0.31
CBWD1-222	ENST00000613508	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.13	□□□□□ -0.31
CBWD1-222	ENST00000613508	FAM126B	Q8IXS8	530 aa		13.13	□□□□□ -0.31
CBWD1-222	ENST00000613508	CDX2	Q99626	313 aa	Predicted RBP	13.13	□□□□□ -0.31
CBWD1-222	ENST00000613508	TMEM47	Q9BQJ4	181 aa		13.13	□□□□□ -0.31
CBWD1-222	ENST00000613508	TTYH1	Q9H313	450 aa	Predicted RBP	13.13	□□□□□ -0.31
CBWD1-222	ENST00000613508	VTA1	Q9NP79	307 aa		13.13	□□□□□ -0.31
CBWD1-222	ENST00000613508	CCDC171	Q6TFL3	1326 aa		13.13	□□□□□ -0.31
CBWD1-222	ENST00000613508	SNHG28	P0DPA3	235 aa		13.12	□□□□□ -0.31
CBWD1-222	ENST00000613508	PDHB	P11177	359 aa		13.12	□□□□□ -0.31
CBWD1-222	ENST00000613508	SNAP25	P60880	206 aa		13.12	□□□□□ -0.31
CBWD1-222	ENST00000613508	NMI	Q13287	307 aa	Predicted RBP	13.12	□□□□□ -0.31
CBWD1-222	ENST00000613508	PPIG	Q13427	754 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
CBWD1-222	ENST00000613508	FSCN1	Q16658	493 aa	Known RBP	13.12	□□□□□ -0.31
CBWD1-222	ENST00000613508	CCDC96	Q2M329	555 aa		13.12	□□□□□ -0.31
CBWD1-222	ENST00000613508	SYDE2	Q5VT97	1194 aa		13.12	□□□□□ -0.31
CBWD1-222	ENST00000613508	TLK2	Q86UE8	772 aa		13.12	□□□□□ -0.31
CBWD1-222	ENST00000613508	FAM161B	Q96MY7	647 aa		13.12	□□□□□ -0.31
CBWD1-222	ENST00000613508	OSBPL3	Q9H4L5	887 aa		13.12	□□□□□ -0.31
CBWD1-222	ENST00000613508	ADD3	Q9UEY8	706 aa	Known RBP	13.12	□□□□□ -0.31
CBWD1-222	ENST00000613508	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	TLR3	O15455	904 aa	Known RBP	13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	SMPD1	P17405	629 aa		13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	MFAP1	P55081	439 aa	Known RBP	13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	AKNAD1	Q5T1N1	836 aa		13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	TTBK2	Q6IQ55	1244 aa		13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	CXCL17	Q6UXB2	119 aa		13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	NSMF	Q6X4W1	530 aa		13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	MFSD6	Q6ZSS7	791 aa		13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	C16orf59	Q7L2K0	433 aa		13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	VTI1A	Q96AJ9	217 aa		13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	CHMP4C	Q96CF2	233 aa		13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	LNPK	Q9C0E8	428 aa		13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	MAF1	Q9H063	256 aa		13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	AP5M1	Q9H0R1	490 aa		13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	RWDD1	Q9H446	243 aa	Predicted RBP	13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	RNF41	Q9H4P4	317 aa	Predicted RBP	13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	CHD7	Q9P2D1	2997 aa		13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	GRIN2D	O15399	1336 aa		13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	WDR19	Q8NEZ3	1342 aa		13.11	□□□□□ -0.31
CBWD1-222	ENST00000613508	LCT	P09848	1927 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	RBM47	A0AV96	593 aa	Known RBP	13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	NFIB	O00712	420 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	ZEB2	O60315	1214 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	SDS	P20132	328 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	SLC16A2	P36021	539 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	BEX3	Q00994	111 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	NUCB1	Q02818	461 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	ZNF543	Q08ER8	600 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	BAAT	Q14032	418 aa	Predicted RBP	13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	DUSP28	Q4G0W2	176 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	RRP12	Q5JTH9	1297 aa	Known RBP	13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	PPP4R3CP	Q6ZMV5	832 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	NOL8	Q76FK4	1167 aa	Known RBP	13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	CHD1L	Q86WJ1	897 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	TBC1D10C	Q8IV04	446 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	TMEM199	Q8N511	208 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	CLEC4D	Q8WXI8	215 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	PDGFC	Q9NRA1	345 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	TOMM22	Q9NS69	142 aa		13.1	□□□□□ -0.31
CBWD1-222	ENST00000613508	TRIM6-TRIM34	B2RNG4	842 aa		13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	DYNC1LI2	O43237	492 aa	Predicted RBP	13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	CSF2RA	P15509	400 aa		13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	ITGA7	Q13683	1181 aa		13.09	□□□□□ -0.31
CBWD1-222	ENST00000613508	TMEM240	Q5SV17	173 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms