RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 TAL1P17542 331 aaPredicted RBP15.85■□□□□ 0.13
PCDHGA3-202ENST00000612467 SOGA3Q5TF21 947 aa15.85■□□□□ 0.13
PCDHGA3-202ENST00000612467 CCDC12Q8WUD4 166 aaPredicted RBP15.85■□□□□ 0.13
PCDHGA3-202ENST00000612467 USP40Q9NVE5 1235 aa15.85■□□□□ 0.13
PCDHGA3-202ENST00000612467 LIMA1Q9UHB6 759 aaKnown RBP15.85■□□□□ 0.13
PCDHGA3-202ENST00000612467 CCP110O43303 1012 aa15.84■□□□□ 0.13
PCDHGA3-202ENST00000612467 NEK8Q86SG6 692 aa15.84■□□□□ 0.13
PCDHGA3-202ENST00000612467 FCHSD1Q86WN1 690 aa15.84■□□□□ 0.13
PCDHGA3-202ENST00000612467 MNS1Q8NEH6 495 aa15.84■□□□□ 0.13
PCDHGA3-202ENST00000612467 TRIM47Q96LD4 638 aa15.84■□□□□ 0.13
PCDHGA3-202ENST00000612467 C6orf50Q9HD87 102 aa15.84■□□□□ 0.13
PCDHGA3-202ENST00000612467 KBTBD4Q9NVX7 518 aa15.84■□□□□ 0.13
PCDHGA3-202ENST00000612467 TRIM10Q9UDY6 481 aa15.84■□□□□ 0.13
PCDHGA3-202ENST00000612467 DDX41Q9UJV9 622 aaKnown RBP15.84■□□□□ 0.13
PCDHGA3-202ENST00000612467 SEC31AO94979 1220 aaKnown RBP15.84■□□□□ 0.13
PCDHGA3-202ENST00000612467 HOXA10P31260 410 aaPredicted RBP15.84■□□□□ 0.13
PCDHGA3-202ENST00000612467 CLCN6P51797 869 aa15.84■□□□□ 0.13
PCDHGA3-202ENST00000612467 REXO1Q8N1G1 1221 aaKnown RBP15.84■□□□□ 0.13
PCDHGA3-202ENST00000612467 PANX2Q96RD6 677 aa15.84■□□□□ 0.13
PCDHGA3-202ENST00000612467 ZNF287Q9HBT7 754 aa15.84■□□□□ 0.13
PCDHGA3-202ENST00000612467 CCDC175P0C221 793 aa15.83■□□□□ 0.13
PCDHGA3-202ENST00000612467 ZSCAN20P17040 1043 aaPredicted RBP15.83■□□□□ 0.13
PCDHGA3-202ENST00000612467 ASIC1P78348 528 aa15.83■□□□□ 0.13
PCDHGA3-202ENST00000612467 PDE4DQ08499 809 aa15.83■□□□□ 0.13
PCDHGA3-202ENST00000612467 DYMQ7RTS9 669 aa15.83■□□□□ 0.13
PCDHGA3-202ENST00000612467 CTAGE1Q96RT6 745 aa15.83■□□□□ 0.13
PCDHGA3-202ENST00000612467 SLF1Q9BQI6 1058 aa15.83■□□□□ 0.13
PCDHGA3-202ENST00000612467 ABHD10Q9NUJ1 306 aa15.83■□□□□ 0.13
PCDHGA3-202ENST00000612467 TRPC5Q9UL62 973 aaPredicted RBP15.83■□□□□ 0.13
PCDHGA3-202ENST00000612467 ONECUT3O60422 494 aaPredicted RBP15.83■□□□□ 0.12
PCDHGA3-202ENST00000612467 TADA3O75528 432 aa15.83■□□□□ 0.12
PCDHGA3-202ENST00000612467 KRT9P35527 623 aa15.83■□□□□ 0.12
PCDHGA3-202ENST00000612467 TNNI2P48788 182 aa15.83■□□□□ 0.12
PCDHGA3-202ENST00000612467 SNAP25P60880 206 aa15.83■□□□□ 0.12
PCDHGA3-202ENST00000612467 TEX35Q5T0J7 233 aa15.83■□□□□ 0.12
PCDHGA3-202ENST00000612467 ZC3H12CQ9C0D7 883 aaKnown RBP15.83■□□□□ 0.12
PCDHGA3-202ENST00000612467 B4DLN1 442 aa15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 PLCG2P16885 1265 aa15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 GABPAQ06546 454 aa15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 KRT25Q7Z3Z0 450 aa15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 GLIS3Q8NEA6 775 aa15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 UBXN4Q92575 508 aa15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 FAM163AQ96GL9 167 aaPredicted RBP15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 TRIM9Q9C026 710 aa15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 CCSER1Q9C0I3 900 aa15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 SLC39A2Q9NP94 309 aa15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 RMND1Q9NWS8 449 aa15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 TTC26A0AVF1 554 aa15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 CDC42EP5Q6NZY7 148 aa15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 COL23A1Q86Y22 540 aaPredicted RBP15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 KIAA0825Q8IV33 1275 aa15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 CRAMP1Q96RY5 1269 aa15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 DUSP9Q99956 384 aaKnown RBP15.82■□□□□ 0.12
PCDHGA3-202ENST00000612467 USP17L10C9JJH3 530 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 SHMT1P34896 483 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 MCM6Q14566 821 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 ZNF569Q5MCW4 686 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 ANKRD40Q6AI12 368 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 KCNK18Q7Z418 384 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 ADGRF4Q8IZF3 695 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 TBC1D22AQ8WUA7 517 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 RIOX1Q9H6W3 641 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 JMJD4Q9H9V9 463 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 PUF60Q9UHX1 559 aaKnown RBP15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 ATP6V0A2Q9Y487 856 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 SRCAPQ6ZRS2 3230 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 LRRC10BA6NIK2 292 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 H2AFXP16104 143 aaPredicted RBP15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 GNA11P29992 359 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 PPP2R3AQ06190 1150 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 CCDC96Q2M329 555 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 TTI2Q6NXR4 508 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 TMED8Q6PL24 325 aaPredicted RBP15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 SP8Q8IXZ3 490 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 GIMAP8Q8ND71 665 aaPredicted RBP15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 LZTS2Q9BRK4 669 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 MRFAP1Q9Y605 127 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 ANKRD31Q8N7Z5 1873 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 SRGNP10124 158 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 MAP3K9P80192 1104 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 GRB10Q13322 594 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 ECM1Q16610 540 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 CT47A1Q5JQC4 288 aaPredicted RBP15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 GALNT17Q6IS24 598 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 KIAA0895Q8NCT3 520 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 OGFRQ9NZT2 677 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 SERPINB13Q9UIV8 391 aa15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 ZHX1Q9UKY1 873 aaPredicted RBP15.81■□□□□ 0.12
PCDHGA3-202ENST00000612467 RHOBTB3O94955 611 aa15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 KRT27Q7Z3Y8 459 aa15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 SLC35F6Q8N357 371 aa15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 CSGALNACT2Q8N6G5 542 aa15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 ZNF622Q969S3 477 aaKnown RBP eCLIP15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 PNMA5Q96PV4 448 aa15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 DNAJC18Q9H819 358 aa15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 AGPAT5Q9NUQ2 364 aa15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 G3V3G9 751 aa15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 LRRC41Q15345 812 aa15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 CALCRLQ16602 461 aa15.8■□□□□ 0.12
PCDHGA3-202ENST00000612467 DCAF8Q5TAQ9 597 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms