RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 U2AF2P26368 475 aaKnown RBP eCLIP9.3□□□□□ -0.922e-10■□□□□ 10.5
TARDBP-213ENST00000611963 SMARCA1P28370 1054 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 NAPAP54920 295 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 NLRP5P59047 1200 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 IKQ13123 557 aaPredicted RBP9.3□□□□□ -0.92
TARDBP-213ENST00000611963 DGKZQ13574 1117 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 MAP3K11Q16584 847 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 SUPT20HL1Q3ZLR7 823 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 FAM83BQ5T0W9 1011 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 SYDE2Q5VT97 1194 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 SCYL3Q8IZE3 742 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 GPT2Q8TD30 523 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 SPATA32Q96LK8 384 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 BEGAINQ9BUH8 593 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 CRISPLD2Q9H0B8 497 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 FOXP1Q9H334 677 aaPredicted RBP9.3□□□□□ -0.92
TARDBP-213ENST00000611963 VCPKMTQ9H867 229 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 BARHL2Q9NY43 387 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 SYNPO2Q9UMS6 1093 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 CLIC4Q9Y696 253 aa9.3□□□□□ -0.92
TARDBP-213ENST00000611963 DDX49Q9Y6V7 483 aaKnown RBP9.3□□□□□ -0.92
TARDBP-213ENST00000611963 COL11A1P12107 1806 aaPredicted RBP9.3□□□□□ -0.92
TARDBP-213ENST00000611963 RLFQ13129 1914 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 TMEM232C9JQI7 657 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 CA12O43570 354 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 PPP1R11O60927 126 aaPredicted RBP9.29□□□□□ -0.92
TARDBP-213ENST00000611963 USP2O75604 605 aaPredicted RBP9.29□□□□□ -0.92
TARDBP-213ENST00000611963 TAL1P17542 331 aaPredicted RBP9.29□□□□□ -0.92
TARDBP-213ENST00000611963 NF2P35240 595 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 EMP3P54852 163 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 TTLL12Q14166 644 aaPredicted RBP9.29□□□□□ -0.92
TARDBP-213ENST00000611963 EARS2Q5JPH6 523 aaKnown RBP9.29□□□□□ -0.92
TARDBP-213ENST00000611963 GPR153Q6NV75 609 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 NOSTRINQ8IVI9 506 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 RASGRP4Q8TDF6 673 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 TNFRSF25Q93038 417 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 COA7Q96BR5 231 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 MTMR8Q96EF0 704 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 GZF1Q9H116 711 aaPredicted RBP9.29□□□□□ -0.92
TARDBP-213ENST00000611963 SH2D4AQ9H788 454 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 BRMS1Q9HCU9 246 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 SH3GLB2Q9NR46 395 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 PICK1Q9NRD5 415 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 GINM1Q9NU53 330 aa9.29□□□□□ -0.92
TARDBP-213ENST00000611963 PNMA6FA0A0J9YX94 578 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 PTPRAP18433 802 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 ATP2B1P20020 1258 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 CALML3P27482 149 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 TOB1P50616 345 aaPredicted RBP9.28□□□□□ -0.92
TARDBP-213ENST00000611963 MTMR2Q13614 643 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 STK38Q15208 465 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 CDC37Q16543 378 aaPredicted RBP9.28□□□□□ -0.92
TARDBP-213ENST00000611963 CSPP1Q1MSJ5 1256 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 QRICH1Q2TAL8 776 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 ANO1Q5XXA6 986 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 ATL3Q6DD88 541 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 BTNL9Q6UXG8 535 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 ARMC9Q7Z3E5 817 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 BLIDQ8IZY5 108 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 CCDC148Q8NFR7 591 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.28□□□□□ -0.923e-13■□□□□ 8.3
TARDBP-213ENST00000611963 CLMNQ96JQ2 1002 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 SCAND2PQ9GZW5 306 aaPredicted RBP9.28□□□□□ -0.92
TARDBP-213ENST00000611963 FBXO28Q9NVF7 368 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 RNF186Q9NXI6 227 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 RTEL1Q9NZ71 1219 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 RCOR1Q9UKL0 485 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 CFAP45Q9UL16 551 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 PCDHA4Q9UN74 947 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 ELP1O95163 1332 aa9.28□□□□□ -0.92
TARDBP-213ENST00000611963 TRIM75PA6NK02 468 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 WNT7AO00755 349 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 ZBTB5O15062 677 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 TRPA1O75762 1119 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 HOXB1P14653 301 aaPredicted RBP9.27□□□□□ -0.93
TARDBP-213ENST00000611963 NASPP49321 788 aaPredicted RBP9.27□□□□□ -0.93
TARDBP-213ENST00000611963 STAT2P52630 851 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 UBE2HP62256 183 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 MAP3K9P80192 1104 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 FOXK1P85037 733 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 SPP2Q13103 211 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 VGLL4Q14135 290 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 KLHL40Q2TBA0 621 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 SKOR2Q2VWA4 1001 aaPredicted RBP9.27□□□□□ -0.93
TARDBP-213ENST00000611963 NOL9Q5SY16 702 aaKnown RBP9.27□□□□□ -0.93
TARDBP-213ENST00000611963 SPRYD7Q5W111 196 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.27□□□□□ -0.93
TARDBP-213ENST00000611963 DAGLBQ8NCG7 672 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 PGBD1Q96JS3 809 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 WDR18Q9BV38 432 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 KIAA1683Q9H0B3 1180 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 SAGE1Q9NXZ1 904 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 PRR12Q9ULL5 1215 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 SNCAIPQ9Y6H5 919 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 ZHX2Q9Y6X8 837 aa9.27□□□□□ -0.93
TARDBP-213ENST00000611963 SMCO2A6NFE2 343 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 hCG_1984214I3L0E3 225 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 M0R2N6 131 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 SPTLC2O15270 562 aa9.26□□□□□ -0.93
TARDBP-213ENST00000611963 PPP1R12BO60237 982 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms