RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 ALX1Q15699 326 aa12.28□□□□□ -0.44
CDH4-202ENST00000611855 NPY5RQ15761 445 aa12.28□□□□□ -0.44
CDH4-202ENST00000611855 NAIF1Q69YI7 327 aaPredicted RBP12.28□□□□□ -0.44
CDH4-202ENST00000611855 IFT81Q8WYA0 676 aa12.28□□□□□ -0.44
CDH4-202ENST00000611855 MIEF2Q96C03 454 aa12.28□□□□□ -0.44
CDH4-202ENST00000611855 MAGEC2Q9UBF1 373 aaPredicted RBP12.28□□□□□ -0.44
CDH4-202ENST00000611855 ZSCAN5CA6NGD5 496 aaPredicted RBP12.27□□□□□ -0.44
CDH4-202ENST00000611855 LGALS16A8MUM7 142 aa12.27□□□□□ -0.44
CDH4-202ENST00000611855 E7EVH7 732 aa12.27□□□□□ -0.44
CDH4-202ENST00000611855 UQCRFS1P1P0C7P4 283 aa12.27□□□□□ -0.44
CDH4-202ENST00000611855 ARID4AP29374 1257 aaPredicted RBP12.27□□□□□ -0.44
CDH4-202ENST00000611855 FNTAP49354 379 aa12.27□□□□□ -0.44
CDH4-202ENST00000611855 PAPD7Q5XG87 772 aaKnown RBP12.27□□□□□ -0.44
CDH4-202ENST00000611855 CATIPQ7Z7H3 387 aa12.27□□□□□ -0.44
CDH4-202ENST00000611855 MYH2Q9UKX2 1941 aa12.27□□□□□ -0.44
CDH4-202ENST00000611855 ZNF263O14978 683 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 PPP1R12BO60237 982 aaPredicted RBP12.27□□□□□ -0.45
CDH4-202ENST00000611855 ATP2C1P98194 919 aaPredicted RBP12.27□□□□□ -0.45
CDH4-202ENST00000611855 HDLBPQ00341 1268 aaKnown RBP12.27□□□□□ -0.45
CDH4-202ENST00000611855 TRIM14Q14142 442 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 CCDC181Q5TID7 509 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 ESR2Q92731 530 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 MS4A14Q96JA4 679 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 RNPC3Q96LT9 517 aaKnown RBP12.27□□□□□ -0.45
CDH4-202ENST00000611855 CARD10Q9BWT7 1032 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 ZNHIT6Q9NWK9 470 aaKnown RBP12.27□□□□□ -0.45
CDH4-202ENST00000611855 MTIF2P46199 727 aaKnown RBP12.27□□□□□ -0.45
CDH4-202ENST00000611855 GUCY2FP51841 1108 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 NAP1L1P55209 391 aaKnown RBP12.27□□□□□ -0.45
CDH4-202ENST00000611855 KIF5AQ12840 1032 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 SEC23AQ15436 765 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 CCDC178Q5BJE1 867 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 NAA35Q5VZE5 725 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 SRBD1Q8N5C6 995 aaKnown RBP12.27□□□□□ -0.45
CDH4-202ENST00000611855 CSGALNACT2Q8N6G5 542 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 NOC3LQ8WTT2 800 aaKnown RBP12.27□□□□□ -0.45
CDH4-202ENST00000611855 LPIN2Q92539 896 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 TUBGCP2Q9BSJ2 902 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 FAM207AQ9NSI2 230 aaPredicted RBP12.27□□□□□ -0.45
CDH4-202ENST00000611855 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 ATRNO75882 1429 aa12.27□□□□□ -0.45
CDH4-202ENST00000611855 GOLGA6L7A0A1B0GV03 622 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 KRT83P78385 493 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 MICALCLQ6ZW33 695 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 TMC4Q7Z404 712 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 CCDC13Q8IYE1 715 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 ZSCAN10Q96SZ4 725 aaPredicted RBP12.26□□□□□ -0.45
CDH4-202ENST00000611855 DNAJC7Q99615 494 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 TMEM94Q12767 1356 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 CCDC189A1A4V9 331 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 RASSF10A6NK89 507 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 BUB1O43683 1085 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 SLC5A1P13866 664 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 CYLC1P35663 651 aaPredicted RBP12.26□□□□□ -0.45
CDH4-202ENST00000611855 FUT2Q10981 343 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 ENOX2Q16206 610 aaKnown RBP12.26□□□□□ -0.45
CDH4-202ENST00000611855 CCDC43Q96MW1 224 aaKnown RBP12.26□□□□□ -0.45
CDH4-202ENST00000611855 ZIM3Q96PE6 472 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 CAPN11Q9UMQ6 739 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 GLI3P10071 1580 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 WDR17Q8IZU2 1322 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 CHD4Q14839 1912 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 TARSL2A2RTX5 802 aaKnown RBP12.26□□□□□ -0.45
CDH4-202ENST00000611855 LSP1P33241 339 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 PTPROQ16827 1216 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 NUP188Q5SRE5 1749 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 C2CD5Q86YS7 1000 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 TMTC2Q8N394 836 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 CCDC42Q96M95 316 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 SLC40A1Q9NP59 571 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 PRDM11Q9NQV5 511 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 TMOD3Q9NYL9 352 aa12.26□□□□□ -0.45
CDH4-202ENST00000611855 H7C1D1 291 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 GBP2P32456 591 aaPredicted RBP12.25□□□□□ -0.45
CDH4-202ENST00000611855 GIGYF2Q6Y7W6 1299 aaKnown RBP12.25□□□□□ -0.45
CDH4-202ENST00000611855 CREG2Q8IUH2 290 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 ADSSL1Q8N142 457 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 ZNF507Q8TCN5 953 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 AENQ8WTP8 325 aaKnown RBP12.25□□□□□ -0.45
CDH4-202ENST00000611855 ZNF473Q8WTR7 871 aaKnown RBP12.25□□□□□ -0.45
CDH4-202ENST00000611855 TBC1D31Q96DN5 1066 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 SH3GL2Q99962 352 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 FAM205AQ6ZU69 1335 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 EPHB6O15197 1021 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 FCER1AP12319 257 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 CFAP58Q5T655 872 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 CCDC121Q6ZUS5 278 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 MAATS1Q7Z4T9 603 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 PROCA1Q8NCQ7 364 aaPredicted RBP12.25□□□□□ -0.45
CDH4-202ENST00000611855 LRRC15Q8TF66 581 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 TNFRSF25Q93038 417 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 TMEM60Q9H2L4 133 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 RNF41Q9H4P4 317 aaPredicted RBP12.25□□□□□ -0.45
CDH4-202ENST00000611855 BCCIPQ9P287 314 aaKnown RBP eCLIP12.25□□□□□ -0.45
CDH4-202ENST00000611855 MCM8Q9UJA3 840 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 JAG2Q9Y219 1238 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 PCDH11XQ9BZA7 1347 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 PCDH11YQ9BZA8 1340 aa12.25□□□□□ -0.45
CDH4-202ENST00000611855 PRPF3O43395 683 aaKnown RBP12.24□□□□□ -0.45
CDH4-202ENST00000611855 FSBPO95073 299 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms