RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 CDH23Q9H251 3354 aa25.81■■□□□ 1.72
TMEM248-207ENST00000607045 TMEM63BQ5T3F8 832 aa25.81■■□□□ 1.72
TMEM248-207ENST00000607045 B4GALNT3Q6L9W6 998 aa25.81■■□□□ 1.72
TMEM248-207ENST00000607045 TMEM47Q9BQJ4 181 aa25.81■■□□□ 1.72
TMEM248-207ENST00000607045 PDGFCQ9NRA1 345 aa25.81■■□□□ 1.72
TMEM248-207ENST00000607045 ELP1O95163 1332 aa25.81■■□□□ 1.72
TMEM248-207ENST00000607045 MCM3APO60318 1980 aa25.8■■□□□ 1.72
TMEM248-207ENST00000607045 TRIM6-TRIM34B2RNG4 842 aa25.8■■□□□ 1.72
TMEM248-207ENST00000607045 HAND2P61296 217 aa25.8■■□□□ 1.72
TMEM248-207ENST00000607045 TNFAIP2Q03169 654 aa25.8■■□□□ 1.72
TMEM248-207ENST00000607045 CCDC96Q2M329 555 aa25.8■■□□□ 1.72
TMEM248-207ENST00000607045 NOL8Q76FK4 1167 aaKnown RBP25.8■■□□□ 1.72
TMEM248-207ENST00000607045 CYP39A1Q9NYL5 469 aa25.8■■□□□ 1.72
TMEM248-207ENST00000607045 ASB14A6NK59 587 aa25.79■■□□□ 1.72
TMEM248-207ENST00000607045 TIMP1P01033 207 aa25.79■■□□□ 1.72
TMEM248-207ENST00000607045 SMAD3P84022 425 aaKnown RBP25.79■■□□□ 1.72
TMEM248-207ENST00000607045 FPGSQ05932 587 aa25.79■■□□□ 1.72
TMEM248-207ENST00000607045 EEPD1Q7L9B9 569 aa25.79■■□□□ 1.72
TMEM248-207ENST00000607045 DCAF4Q8WV16 495 aa25.79■■□□□ 1.72
TMEM248-207ENST00000607045 RILPL2Q969X0 211 aa25.79■■□□□ 1.72
TMEM248-207ENST00000607045 CDX2Q99626 313 aaPredicted RBP25.79■■□□□ 1.72
TMEM248-207ENST00000607045 TTYH1Q9H313 450 aaPredicted RBP25.79■■□□□ 1.72
TMEM248-207ENST00000607045 GPCPD1Q9NPB8 672 aa25.79■■□□□ 1.72
TMEM248-207ENST00000607045 TBX21Q9UL17 535 aa25.79■■□□□ 1.72
TMEM248-207ENST00000607045 CCPG1Q9ULG6 757 aa25.79■■□□□ 1.72
TMEM248-207ENST00000607045 ARVCFO00192 962 aa25.78■■□□□ 1.72
TMEM248-207ENST00000607045 NKX3-2P78367 333 aa25.78■■□□□ 1.72
TMEM248-207ENST00000607045 BTNL9Q6UXG8 535 aa25.78■■□□□ 1.72
TMEM248-207ENST00000607045 NSMFQ6X4W1 530 aa25.78■■□□□ 1.72
TMEM248-207ENST00000607045 RNPC3Q96LT9 517 aaKnown RBP25.78■■□□□ 1.72
TMEM248-207ENST00000607045 TCP11L1Q9NUJ3 509 aa25.78■■□□□ 1.72
TMEM248-207ENST00000607045 GNEQ9Y223 722 aaKnown RBP25.78■■□□□ 1.72
TMEM248-207ENST00000607045 FRMPD2Q68DX3 1309 aaPredicted RBP25.78■■□□□ 1.72
TMEM248-207ENST00000607045 DYNC1LI2O43237 492 aaPredicted RBP25.77■■□□□ 1.72
TMEM248-207ENST00000607045 ICAM1P05362 532 aa25.77■■□□□ 1.72
TMEM248-207ENST00000607045 TOP1P11387 765 aaKnown RBP25.77■■□□□ 1.72
TMEM248-207ENST00000607045 SMPD1P17405 629 aa25.77■■□□□ 1.72
TMEM248-207ENST00000607045 TAPT1Q6NXT6 567 aa25.77■■□□□ 1.72
TMEM248-207ENST00000607045 C16orf59Q7L2K0 433 aa25.77■■□□□ 1.72
TMEM248-207ENST00000607045 RANBP17Q9H2T7 1088 aaKnown RBP25.77■■□□□ 1.72
TMEM248-207ENST00000607045 A0A0U1RQG5 324 aaPredicted RBP25.76■■□□□ 1.71
TMEM248-207ENST00000607045 IGHDP01880 384 aa25.76■■□□□ 1.71
TMEM248-207ENST00000607045 BAATQ14032 418 aaPredicted RBP25.76■■□□□ 1.71
TMEM248-207ENST00000607045 SYDE2Q5VT97 1194 aa25.76■■□□□ 1.71
TMEM248-207ENST00000607045 CXCL17Q6UXB2 119 aa25.76■■□□□ 1.71
TMEM248-207ENST00000607045 SMC5Q8IY18 1101 aa25.76■■□□□ 1.71
TMEM248-207ENST00000607045 MFSD5Q6N075 450 aa25.75■■□□□ 1.71
TMEM248-207ENST00000607045 TICAM2Q86XR7 235 aa25.75■■□□□ 1.71
TMEM248-207ENST00000607045 FBXO16Q8IX29 292 aaPredicted RBP25.75■■□□□ 1.71
TMEM248-207ENST00000607045 YTHDC1Q96MU7 727 aaKnown RBP25.75■■□□□ 1.71
TMEM248-207ENST00000607045 VCANP13611 3396 aa25.75■■□□□ 1.71
TMEM248-207ENST00000607045 CCDC171Q6TFL3 1326 aa25.74■■□□□ 1.71
TMEM248-207ENST00000607045 SDSP20132 328 aa25.74■■□□□ 1.71
TMEM248-207ENST00000607045 AKNAD1Q5T1N1 836 aa25.74■■□□□ 1.71
TMEM248-207ENST00000607045 IQSEC1Q6DN90 963 aa25.74■■□□□ 1.71
TMEM248-207ENST00000607045 MFSD6Q6ZSS7 791 aa25.74■■□□□ 1.71
TMEM248-207ENST00000607045 FAM126BQ8IXS8 530 aa25.74■■□□□ 1.71
TMEM248-207ENST00000607045 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.74■■□□□ 1.717e-7■■□□□ 13.4
TMEM248-207ENST00000607045 RWDD1Q9H446 243 aaPredicted RBP25.74■■□□□ 1.71
TMEM248-207ENST00000607045 GRIN2DO15399 1336 aa25.73■■□□□ 1.71
TMEM248-207ENST00000607045 MROH7Q68CQ1 1323 aa25.73■■□□□ 1.71
TMEM248-207ENST00000607045 NFIBO00712 420 aa25.73■■□□□ 1.71
TMEM248-207ENST00000607045 FSCN1Q16658 493 aaKnown RBP25.73■■□□□ 1.71
TMEM248-207ENST00000607045 TLK2Q86UE8 772 aa25.73■■□□□ 1.71
TMEM248-207ENST00000607045 TBC1D10CQ8IV04 446 aa25.73■■□□□ 1.71
TMEM248-207ENST00000607045 PLEKHM2Q8IWE5 1019 aa25.73■■□□□ 1.71
TMEM248-207ENST00000607045 PDHBP11177 359 aa25.72■■□□□ 1.71
TMEM248-207ENST00000607045 KIAA1211Q6ZU35 1233 aa25.72■■□□□ 1.71
TMEM248-207ENST00000607045 CHD1LQ86WJ1 897 aa25.72■■□□□ 1.71
TMEM248-207ENST00000607045 MORC4Q8TE76 937 aa25.72■■□□□ 1.71
TMEM248-207ENST00000607045 MYLIPQ8WY64 445 aa25.72■■□□□ 1.71
TMEM248-207ENST00000607045 TTC14Q96N46 770 aa25.72■■□□□ 1.71
TMEM248-207ENST00000607045 PPP1R12CQ9BZL4 782 aa25.72■■□□□ 1.71
TMEM248-207ENST00000607045 AP5M1Q9H0R1 490 aa25.72■■□□□ 1.71
TMEM248-207ENST00000607045 CD4P01730 458 aa25.71■■□□□ 1.71
TMEM248-207ENST00000607045 ACRP10323 421 aa25.71■■□□□ 1.71
TMEM248-207ENST00000607045 CSF2RAP15509 400 aa25.71■■□□□ 1.71
TMEM248-207ENST00000607045 SLC43A3Q8NBI5 491 aa25.71■■□□□ 1.71
TMEM248-207ENST00000607045 CLEC4DQ8WXI8 215 aa25.71■■□□□ 1.71
TMEM248-207ENST00000607045 ZKSCAN3Q9BRR0 538 aa25.71■■□□□ 1.71
TMEM248-207ENST00000607045 ZMYM6O95789 1325 aa25.7■■□□□ 1.71
TMEM248-207ENST00000607045 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.7■■□□□ 1.7
TMEM248-207ENST00000607045 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.7■■□□□ 1.7
TMEM248-207ENST00000607045 CYP2C18P33260 490 aa25.7■■□□□ 1.7
TMEM248-207ENST00000607045 ITGA7Q13683 1181 aa25.7■■□□□ 1.7
TMEM248-207ENST00000607045 TMEM240Q5SV17 173 aa25.7■■□□□ 1.7
TMEM248-207ENST00000607045 EXOC6Q8TAG9 804 aa25.7■■□□□ 1.7
TMEM248-207ENST00000607045 CHD9Q3L8U1 2897 aa25.7■■□□□ 1.7
TMEM248-207ENST00000607045 PTPDC1A2A3K4 754 aa25.69■■□□□ 1.7
TMEM248-207ENST00000607045 ALDH5A1P51649 535 aaPredicted RBP25.69■■□□□ 1.7
TMEM248-207ENST00000607045 PSMC6P62333 389 aa25.69■■□□□ 1.7
TMEM248-207ENST00000607045 NUCB1Q02818 461 aa25.69■■□□□ 1.7
TMEM248-207ENST00000607045 ZNF543Q08ER8 600 aa25.69■■□□□ 1.7
TMEM248-207ENST00000607045 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.69■■□□□ 1.7
TMEM248-207ENST00000607045 CPVLQ9H3G5 476 aa25.69■■□□□ 1.7
TMEM248-207ENST00000607045 VTA1Q9NP79 307 aa25.69■■□□□ 1.7
TMEM248-207ENST00000607045 TLR3O15455 904 aaKnown RBP25.68■■□□□ 1.7
TMEM248-207ENST00000607045 CABYRO75952 493 aa25.68■■□□□ 1.7
TMEM248-207ENST00000607045 GOLGA8HP0CJ92 632 aa25.68■■□□□ 1.7
TMEM248-207ENST00000607045 SNHG28P0DPA3 235 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms