RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 ALAS1P13196 640 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 STAT3P40763 770 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 OAZ1P54368 228 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 FAM110CQ1W6H9 321 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 Q3C1V9 767 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 MUM1L1Q5H9M0 696 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 GPRC5AQ8NFJ5 357 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 AMNQ9BXJ7 453 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 CFHR5Q9BXR6 569 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 PORCNQ9H237 461 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 RNF39Q9H2S5 420 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 RNF146Q9NTX7 359 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 BARHL2Q9NY43 387 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 VPS54Q9P1Q0 977 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 RBM27Q9P2N5 1060 aaKnown RBP8.87□□□□□ -0.99
MSH6-211ENST00000606499 TSKSQ9UJT2 592 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 SMC3Q9UQE7 1217 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.87□□□□□ -0.99
MSH6-211ENST00000606499 PCDHA1Q9Y5I3 950 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 ABCB11O95342 1321 aa8.86□□□□□ -0.99
MSH6-211ENST00000606499 NFIBO00712 420 aa8.86□□□□□ -0.99
MSH6-211ENST00000606499 NAPAP54920 295 aa8.86□□□□□ -0.99
MSH6-211ENST00000606499 HMGN5P82970 282 aaKnown RBP8.86□□□□□ -0.99
MSH6-211ENST00000606499 MAP2K1Q02750 393 aaPredicted RBP8.86□□□□□ -0.99
MSH6-211ENST00000606499 NCAPG2Q86XI2 1143 aa8.86□□□□□ -0.99
MSH6-211ENST00000606499 RIOX2Q8IUF8 465 aa8.86□□□□□ -0.99
MSH6-211ENST00000606499 FAM184AQ8NB25 1140 aa8.86□□□□□ -0.99
MSH6-211ENST00000606499 INTS4Q96HW7 963 aaKnown RBP8.86□□□□□ -0.99
MSH6-211ENST00000606499 TRERF1Q96PN7 1200 aa8.86□□□□□ -0.99
MSH6-211ENST00000606499 ALG1Q9BT22 464 aa8.86□□□□□ -0.99
MSH6-211ENST00000606499 EFCC1Q9HA90 598 aa8.86□□□□□ -0.99
MSH6-211ENST00000606499 SAGE1Q9NXZ1 904 aa8.86□□□□□ -0.99
MSH6-211ENST00000606499 MYH15Q9Y2K3 1946 aa8.86□□□□□ -0.99
MSH6-211ENST00000606499 hCG_1984214I3L0E3 225 aa8.85□□□□□ -0.99
MSH6-211ENST00000606499 ADAMTS3O15072 1205 aa8.85□□□□□ -0.99
MSH6-211ENST00000606499 ERCC3P19447 782 aa8.85□□□□□ -0.99
MSH6-211ENST00000606499 CTGFP29279 349 aa8.85□□□□□ -0.99
MSH6-211ENST00000606499 GUCY1B3Q02153 619 aa8.85□□□□□ -0.99
MSH6-211ENST00000606499 WDR78Q5VTH9 848 aa8.85□□□□□ -0.99
MSH6-211ENST00000606499 PPP1R18Q6NYC8 613 aa8.85□□□□□ -0.99
MSH6-211ENST00000606499 SLC30A10Q6XR72 485 aa8.85□□□□□ -0.99
MSH6-211ENST00000606499 ZNF713Q8N859 430 aaPredicted RBP8.85□□□□□ -0.99
MSH6-211ENST00000606499 CLEC4DQ8WXI8 215 aa8.85□□□□□ -0.99
MSH6-211ENST00000606499 WASF1Q92558 559 aa8.85□□□□□ -0.99
MSH6-211ENST00000606499 BEGAINQ9BUH8 593 aa8.85□□□□□ -0.99
MSH6-211ENST00000606499 ARHGAP39Q9C0H5 1083 aa8.85□□□□□ -0.99
MSH6-211ENST00000606499 WBP1LQ9NX94 342 aa8.85□□□□□ -0.99
MSH6-211ENST00000606499 KCNJ14Q9UNX9 436 aa8.85□□□□□ -0.99
MSH6-211ENST00000606499 ZNFX1Q9P2E3 1918 aaKnown RBP8.85□□□□□ -0.99
MSH6-211ENST00000606499 SLC25A27O95847 323 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 CFBP00751 764 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 ADCY7P51828 1080 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 CCNA1P78396 465 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 LACTBP83111 547 aaPredicted RBP8.84□□□□□ -0.99
MSH6-211ENST00000606499 CAP1Q01518 475 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 TRAF1Q13077 416 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 NPY5RQ15761 445 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 UBE2SQ16763 222 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 TKFCQ3LXA3 575 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 NSMFQ6X4W1 530 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 JMYQ8N9B5 988 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 SHCBP1Q8NEM2 672 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 TBC1D5Q92609 795 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 C8orf76Q96K31 380 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 PHF20Q9BVI0 1012 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 MROH8Q9H579 483 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 ACAD9Q9H845 621 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 CWC22Q9HCG8 908 aaKnown RBP8.84□□□□□ -0.99
MSH6-211ENST00000606499 A1CFQ9NQ94 594 aaKnown RBP8.84□□□□□ -0.99
MSH6-211ENST00000606499 SH3GLB2Q9NR46 395 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 PNMA2Q9UL42 364 aa8.84□□□□□ -0.99
MSH6-211ENST00000606499 MRPL11Q9Y3B7 192 aaKnown RBP8.84□□□□□ -0.99
MSH6-211ENST00000606499 CASP8AP2Q9UKL3 1982 aa8.83□□□□□ -1
MSH6-211ENST00000606499 ESYT2A0FGR8 921 aa8.83□□□□□ -1
MSH6-211ENST00000606499 SMCO2A6NFE2 343 aa8.83□□□□□ -1
MSH6-211ENST00000606499 GPR25O00155 361 aa8.83□□□□□ -1
MSH6-211ENST00000606499 MMP1P03956 469 aa8.83□□□□□ -1
MSH6-211ENST00000606499 MAPK4P31152 587 aa8.83□□□□□ -1
MSH6-211ENST00000606499 HOXA13P31271 388 aaPredicted RBP8.83□□□□□ -1
MSH6-211ENST00000606499 COPB2P35606 906 aa8.83□□□□□ -1
MSH6-211ENST00000606499 HSD17B4P51659 736 aa8.83□□□□□ -1
MSH6-211ENST00000606499 NLRP5P59047 1200 aa8.83□□□□□ -1
MSH6-211ENST00000606499 SP3Q02447 781 aa8.83□□□□□ -1
MSH6-211ENST00000606499 TRIM29Q14134 588 aa8.83□□□□□ -1
MSH6-211ENST00000606499 KRT40Q6A162 431 aa8.83□□□□□ -1
MSH6-211ENST00000606499 USP17L6PQ6QN14 398 aa8.83□□□□□ -1
MSH6-211ENST00000606499 GPR142Q7Z601 462 aa8.83□□□□□ -1
MSH6-211ENST00000606499 CCAR1Q8IX12 1150 aaKnown RBP8.83□□□□□ -1
MSH6-211ENST00000606499 ANKRD35Q8N283 1001 aa8.83□□□□□ -1
MSH6-211ENST00000606499 CHST13Q8NET6 341 aa8.83□□□□□ -1
MSH6-211ENST00000606499 CCDC148Q8NFR7 591 aa8.83□□□□□ -1
MSH6-211ENST00000606499 CD99L2Q8TCZ2 262 aa8.83□□□□□ -1
MSH6-211ENST00000606499 OXER1Q8TDS5 423 aa8.83□□□□□ -1
MSH6-211ENST00000606499 CCDC12Q8WUD4 166 aaPredicted RBP8.83□□□□□ -1
MSH6-211ENST00000606499 ZNF296Q8WUU4 475 aaPredicted RBP8.83□□□□□ -1
MSH6-211ENST00000606499 CUL5Q93034 780 aa8.83□□□□□ -1
MSH6-211ENST00000606499 TRIM47Q96LD4 638 aa8.83□□□□□ -1
MSH6-211ENST00000606499 PURBQ96QR8 312 aaKnown RBP8.83□□□□□ -1
MSH6-211ENST00000606499 ZMYND12Q9H0C1 365 aa8.83□□□□□ -1
MSH6-211ENST00000606499 PSTPIP2Q9H939 334 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms