RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 USP17L18D6R9N7 530 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 USP17L22D6RA61 530 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 USP17L17D6RBQ6 530 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 USP17L19D6RCP7 530 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 USP17L20D6RJB6 530 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 ADORA1P30542 326 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 USP17L24Q0WX57 530 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 PRAMEF19Q5SWL8 479 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 PDXDC2PQ6P474 469 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 C16orf59Q7L2K0 433 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 DPP9Q86TI2 863 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 METTL16Q86W50 562 aaKnown RBP14.84□□□□□ -0.03
HLA-F-230ENST00000606273 FOXP4Q8IVH2 680 aaPredicted RBP14.84□□□□□ -0.03
HLA-F-230ENST00000606273 MEIOBQ8N635 442 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 CRBNQ96SW2 442 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 GINM1Q9NU53 330 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 BTBD7Q9P203 1132 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 PHF24Q9UPV7 400 aa14.84□□□□□ -0.03
HLA-F-230ENST00000606273 PDS5AQ29RF7 1337 aaKnown RBP14.84□□□□□ -0.03
HLA-F-230ENST00000606273 SRGAP3O43295 1099 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 CIAO1O76071 339 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 LDHCP07864 332 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 ATP8B2P98198 1209 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 FAAP100Q0VG06 881 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 TMEM31Q5JXX7 168 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 RASIP1Q5U651 963 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 CEP85Q6P2H3 762 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 LBX2Q6XYB7 198 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 CATSPERGQ6ZRH7 1159 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 CCDC129Q6ZRS4 1044 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 CCDC116Q8IYX3 515 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 ARHGAP9Q9BRR9 750 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 SIL1Q9H173 461 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 DHX36Q9H2U1 1008 aaKnown RBP14.83□□□□□ -0.04
HLA-F-230ENST00000606273 DNAJC18Q9H819 358 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 RLFQ13129 1914 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 XIRP2A4UGR9 3374 aa14.83□□□□□ -0.04
HLA-F-230ENST00000606273 PQBP1O60828 265 aaKnown RBP14.82□□□□□ -0.04
HLA-F-230ENST00000606273 AP1G2O75843 785 aa14.82□□□□□ -0.04
HLA-F-230ENST00000606273 UPP2O95045 317 aa14.82□□□□□ -0.04
HLA-F-230ENST00000606273 GDF11O95390 407 aa14.82□□□□□ -0.04
HLA-F-230ENST00000606273 BMP2P12643 396 aa14.82□□□□□ -0.04
HLA-F-230ENST00000606273 TIMM10P62072 90 aa14.82□□□□□ -0.04
HLA-F-230ENST00000606273 TFF2Q03403 129 aa14.82□□□□□ -0.04
HLA-F-230ENST00000606273 SIRT2Q8IXJ6 389 aa14.82□□□□□ -0.04
HLA-F-230ENST00000606273 LINC00528Q8N1L1 170 aa14.82□□□□□ -0.04
HLA-F-230ENST00000606273 SLC44A5Q8NCS7 719 aa14.82□□□□□ -0.04
HLA-F-230ENST00000606273 NSUN4Q96CB9 384 aaKnown RBP14.82□□□□□ -0.04
HLA-F-230ENST00000606273 C12orf42Q96LP6 360 aa14.82□□□□□ -0.04
HLA-F-230ENST00000606273 TOX2Q96NM4 488 aa14.82□□□□□ -0.04
HLA-F-230ENST00000606273 ZBTB21Q9ULJ3 1066 aa14.82□□□□□ -0.04
HLA-F-230ENST00000606273 HDAC5Q9UQL6 1122 aa14.82□□□□□ -0.04
HLA-F-230ENST00000606273 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.82□□□□□ -0.04
HLA-F-230ENST00000606273 FRMPD3Q5JV73 1810 aa14.81□□□□□ -0.04
HLA-F-230ENST00000606273 STRNO43815 780 aa14.81□□□□□ -0.04
HLA-F-230ENST00000606273 MAN1A2O60476 641 aa14.81□□□□□ -0.04
HLA-F-230ENST00000606273 TIMP1P01033 207 aa14.81□□□□□ -0.04
HLA-F-230ENST00000606273 ADORA2AP29274 412 aa14.81□□□□□ -0.04
HLA-F-230ENST00000606273 KCNQ1P51787 676 aa14.81□□□□□ -0.04
HLA-F-230ENST00000606273 GSTO1P78417 241 aa14.81□□□□□ -0.04
HLA-F-230ENST00000606273 FAM47AQ5JRC9 791 aa14.81□□□□□ -0.04
HLA-F-230ENST00000606273 ANKRD33Q7Z3H0 272 aa14.81□□□□□ -0.04
HLA-F-230ENST00000606273 TEX11Q8IYF3 940 aa14.81□□□□□ -0.04
HLA-F-230ENST00000606273 SNX27Q96L92 541 aa14.81□□□□□ -0.04
HLA-F-230ENST00000606273 COPRSQ9NQ92 184 aa14.81□□□□□ -0.04
HLA-F-230ENST00000606273 GPR37L1O60883 481 aa14.8□□□□□ -0.04
HLA-F-230ENST00000606273 COBLO75128 1261 aa14.8□□□□□ -0.04
HLA-F-230ENST00000606273 AAK1Q2M2I8 961 aa14.8□□□□□ -0.04
HLA-F-230ENST00000606273 TMEM240Q5SV17 173 aa14.8□□□□□ -0.04
HLA-F-230ENST00000606273 MFSD5Q6N075 450 aa14.8□□□□□ -0.04
HLA-F-230ENST00000606273 TBC1D9Q6ZT07 1266 aa14.8□□□□□ -0.04
HLA-F-230ENST00000606273 SSH3Q8TE77 659 aa14.8□□□□□ -0.04
HLA-F-230ENST00000606273 SH3RF3Q8TEJ3 882 aaPredicted RBP14.8□□□□□ -0.04
HLA-F-230ENST00000606273 C11orf16Q9NQ32 467 aa14.8□□□□□ -0.04
HLA-F-230ENST00000606273 BDP1A6H8Y1 2624 aa14.79□□□□□ -0.04
HLA-F-230ENST00000606273 DCDC2CA8MYV0 355 aa14.79□□□□□ -0.04
HLA-F-230ENST00000606273 IL15P40933 162 aaPredicted RBP14.79□□□□□ -0.04
HLA-F-230ENST00000606273 IRX6P78412 446 aaPredicted RBP14.79□□□□□ -0.04
HLA-F-230ENST00000606273 ZYXQ15942 572 aaKnown RBP14.79□□□□□ -0.04
HLA-F-230ENST00000606273 CRACR2BQ8N4Y2 399 aaPredicted RBP14.79□□□□□ -0.04
HLA-F-230ENST00000606273 XPNPEP3Q9NQH7 507 aa14.79□□□□□ -0.04
HLA-F-230ENST00000606273 MSRAQ9UJ68 235 aa14.79□□□□□ -0.04
HLA-F-230ENST00000606273 MYH2Q9UKX2 1941 aa14.79□□□□□ -0.04
HLA-F-230ENST00000606273 A0A1W2PQ45 241 aaPredicted RBP14.78□□□□□ -0.04
HLA-F-230ENST00000606273 A0A1W2PQY0 241 aa14.78□□□□□ -0.04
HLA-F-230ENST00000606273 RNF180Q86T96 592 aa14.78□□□□□ -0.04
HLA-F-230ENST00000606273 MOV10L1Q9BXT6 1211 aaKnown RBP14.78□□□□□ -0.04
HLA-F-230ENST00000606273 HMG20BQ9P0W2 317 aa14.78□□□□□ -0.04
HLA-F-230ENST00000606273 ERC2O15083 957 aa14.77□□□□□ -0.05
HLA-F-230ENST00000606273 PGK1P00558 417 aa14.77□□□□□ -0.05
HLA-F-230ENST00000606273 GH2P01242 217 aa14.77□□□□□ -0.05
HLA-F-230ENST00000606273 RARBP10826 455 aa14.77□□□□□ -0.05
HLA-F-230ENST00000606273 USP14P54578 494 aa14.77□□□□□ -0.05
HLA-F-230ENST00000606273 PPIGQ13427 754 aaKnown RBP eCLIP14.77□□□□□ -0.05
HLA-F-230ENST00000606273 RAB30Q15771 203 aa14.77□□□□□ -0.05
HLA-F-230ENST00000606273 CCDC174Q6PII3 467 aa14.77□□□□□ -0.05
HLA-F-230ENST00000606273 ZNF365Q70YC5 407 aa14.77□□□□□ -0.05
HLA-F-230ENST00000606273 ZBTB33Q86T24 672 aa14.77□□□□□ -0.05
HLA-F-230ENST00000606273 EXOC6Q8TAG9 804 aa14.77□□□□□ -0.05
HLA-F-230ENST00000606273 TGFBRAP1Q8WUH2 860 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms