RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 GMCL1Q96IK5 515 aa21.47■■□□□ 1.03
CCDC12-213ENST00000605875 AGBL1Q96MI9 1066 aa21.47■■□□□ 1.03
CCDC12-213ENST00000605875 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.47■■□□□ 1.039e-16■□□□□ 8.1
CCDC12-213ENST00000605875 KATNBL1Q9H079 304 aa21.47■■□□□ 1.03
CCDC12-213ENST00000605875 DIAPH3Q9NSV4 1193 aa21.47■■□□□ 1.03
CCDC12-213ENST00000605875 RNF146Q9NTX7 359 aa21.47■■□□□ 1.03
CCDC12-213ENST00000605875 ANAPC4Q9UJX5 808 aa21.47■■□□□ 1.03
CCDC12-213ENST00000605875 FGAP02671 866 aa21.46■■□□□ 1.03
CCDC12-213ENST00000605875 PPIGQ13427 754 aaKnown RBP eCLIP21.46■■□□□ 1.031e-21■■□□□ 13.4
CCDC12-213ENST00000605875 TKFCQ3LXA3 575 aa21.46■■□□□ 1.03
CCDC12-213ENST00000605875 PPP4R3BQ5MIZ7 849 aa21.46■■□□□ 1.03
CCDC12-213ENST00000605875 A1CFQ9NQ94 594 aaKnown RBP21.46■■□□□ 1.03
CCDC12-213ENST00000605875 ZNF536O15090 1300 aa21.46■■□□□ 1.03
CCDC12-213ENST00000605875 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.45■■□□□ 1.02
CCDC12-213ENST00000605875 SOWAHBA6NEL2 793 aa21.45■■□□□ 1.02
CCDC12-213ENST00000605875 ASB14A6NK59 587 aa21.45■■□□□ 1.02
CCDC12-213ENST00000605875 CTAGE5O15320 804 aa21.45■■□□□ 1.02
CCDC12-213ENST00000605875 TLR3O15455 904 aaKnown RBP21.45■■□□□ 1.02
CCDC12-213ENST00000605875 NMT2O60551 498 aa21.45■■□□□ 1.02
CCDC12-213ENST00000605875 DNAJB2P25686 324 aa21.45■■□□□ 1.02
CCDC12-213ENST00000605875 HAND2P61296 217 aa21.45■■□□□ 1.02
CCDC12-213ENST00000605875 BEX3Q00994 111 aa21.45■■□□□ 1.02
CCDC12-213ENST00000605875 TNFAIP2Q03169 654 aa21.45■■□□□ 1.02
CCDC12-213ENST00000605875 CCDC174Q6PII3 467 aa21.45■■□□□ 1.02
CCDC12-213ENST00000605875 CWC27Q6UX04 472 aaKnown RBP21.45■■□□□ 1.02
CCDC12-213ENST00000605875 NOL8Q76FK4 1167 aaKnown RBP21.45■■□□□ 1.02
CCDC12-213ENST00000605875 TRERF1Q96PN7 1200 aa21.45■■□□□ 1.02
CCDC12-213ENST00000605875 TOMM22Q9NS69 142 aa21.45■■□□□ 1.02
CCDC12-213ENST00000605875 STX8Q9UNK0 236 aa21.45■■□□□ 1.02
CCDC12-213ENST00000605875 ORC4O43929 436 aa21.44■■□□□ 1.02
CCDC12-213ENST00000605875 RANBP6O60518 1105 aaKnown RBP21.44■■□□□ 1.02
CCDC12-213ENST00000605875 PLA2G6O60733 806 aa21.44■■□□□ 1.02
CCDC12-213ENST00000605875 ALAS1P13196 640 aa21.44■■□□□ 1.02
CCDC12-213ENST00000605875 MFAP1P55081 439 aaKnown RBP21.44■■□□□ 1.02
CCDC12-213ENST00000605875 NKX3-2P78367 333 aa21.44■■□□□ 1.02
CCDC12-213ENST00000605875 GRIN2CQ14957 1233 aa21.44■■□□□ 1.02
CCDC12-213ENST00000605875 RRP12Q5JTH9 1297 aaKnown RBP21.44■■□□□ 1.02
CCDC12-213ENST00000605875 TMEM240Q5SV17 173 aa21.44■■□□□ 1.02
CCDC12-213ENST00000605875 RCSD1Q6JBY9 416 aa21.44■■□□□ 1.02
CCDC12-213ENST00000605875 KCTD1Q719H9 257 aa21.44■■□□□ 1.02
CCDC12-213ENST00000605875 C16orf59Q7L2K0 433 aa21.44■■□□□ 1.02
CCDC12-213ENST00000605875 FAM126BQ8IXS8 530 aa21.44■■□□□ 1.02
CCDC12-213ENST00000605875 TMEM199Q8N511 208 aa21.44■■□□□ 1.02
CCDC12-213ENST00000605875 GSPT1P15170 499 aaKnown RBP21.43■■□□□ 1.02
CCDC12-213ENST00000605875 CSF2RAP15509 400 aa21.43■■□□□ 1.02
CCDC12-213ENST00000605875 SNAP25P60880 206 aa21.43■■□□□ 1.02
CCDC12-213ENST00000605875 RASGRP2Q7LDG7 609 aa21.43■■□□□ 1.02
CCDC12-213ENST00000605875 TBC1D10CQ8IV04 446 aa21.43■■□□□ 1.02
CCDC12-213ENST00000605875 PPP1R12CQ9BZL4 782 aa21.43■■□□□ 1.02
CCDC12-213ENST00000605875 ZNF576Q9H609 170 aa21.43■■□□□ 1.02
CCDC12-213ENST00000605875 IL17RBQ9NRM6 502 aa21.43■■□□□ 1.02
CCDC12-213ENST00000605875 HIP1O00291 1037 aa21.42■■□□□ 1.02
CCDC12-213ENST00000605875 ASTN1O14525 1302 aa21.42■■□□□ 1.02
CCDC12-213ENST00000605875 TTC22Q5TAA0 569 aa21.42■■□□□ 1.02
CCDC12-213ENST00000605875 TLK2Q86UE8 772 aa21.42■■□□□ 1.02
CCDC12-213ENST00000605875 TIFAQ96CG3 184 aa21.42■■□□□ 1.02
CCDC12-213ENST00000605875 CDH23Q9H251 3354 aa21.42■■□□□ 1.02
CCDC12-213ENST00000605875 PRR12Q9ULL5 1215 aa21.42■■□□□ 1.02
CCDC12-213ENST00000605875 GNEQ9Y223 722 aaKnown RBP21.42■■□□□ 1.02
CCDC12-213ENST00000605875 CABYRO75952 493 aa21.41■■□□□ 1.02
CCDC12-213ENST00000605875 CD4P01730 458 aa21.41■■□□□ 1.02
CCDC12-213ENST00000605875 FGRP09769 529 aa21.41■■□□□ 1.02
CCDC12-213ENST00000605875 ACRP10323 421 aa21.41■■□□□ 1.02
CCDC12-213ENST00000605875 MUM1L1Q5H9M0 696 aa21.41■■□□□ 1.02
CCDC12-213ENST00000605875 CXCL17Q6UXB2 119 aa21.41■■□□□ 1.02
CCDC12-213ENST00000605875 ZNF365Q70YC5 407 aa21.41■■□□□ 1.02
CCDC12-213ENST00000605875 AP5M1Q9H0R1 490 aa21.41■■□□□ 1.02
CCDC12-213ENST00000605875 MTMR7Q9Y216 660 aa21.41■■□□□ 1.02
CCDC12-213ENST00000605875 EYSQ5T1H1 3165 aa21.41■■□□□ 1.02
CCDC12-213ENST00000605875 NEDD4P46934 1319 aa21.4■■□□□ 1.02
CCDC12-213ENST00000605875 DYNC1LI2O43237 492 aaPredicted RBP21.4■■□□□ 1.02
CCDC12-213ENST00000605875 CYP2C18P33260 490 aa21.4■■□□□ 1.02
CCDC12-213ENST00000605875 RASIP1Q5U651 963 aa21.4■■□□□ 1.02
CCDC12-213ENST00000605875 PSRC1Q6PGN9 363 aaPredicted RBP21.4■■□□□ 1.02
CCDC12-213ENST00000605875 SLC43A3Q8NBI5 491 aa21.4■■□□□ 1.02
CCDC12-213ENST00000605875 PDGFCQ9NRA1 345 aa21.4■■□□□ 1.02
CCDC12-213ENST00000605875 CYP39A1Q9NYL5 469 aa21.4■■□□□ 1.02
CCDC12-213ENST00000605875 DDX49Q9Y6V7 483 aaKnown RBP21.4■■□□□ 1.02
CCDC12-213ENST00000605875 LRRC37A2A6NM11 1700 aa21.39■■□□□ 1.01
CCDC12-213ENST00000605875 GRXCR1A8MXD5 290 aa21.39■■□□□ 1.01
CCDC12-213ENST00000605875 ZEB2O60315 1214 aa21.39■■□□□ 1.01
CCDC12-213ENST00000605875 SMPD1P17405 629 aa21.39■■□□□ 1.01
CCDC12-213ENST00000605875 FSCN1Q16658 493 aaKnown RBP21.39■■□□□ 1.01
CCDC12-213ENST00000605875 IQSEC1Q6DN90 963 aa21.39■■□□□ 1.01
CCDC12-213ENST00000605875 EEPD1Q7L9B9 569 aa21.39■■□□□ 1.01
CCDC12-213ENST00000605875 PBX4Q9BYU1 374 aa21.39■■□□□ 1.01
CCDC12-213ENST00000605875 IL25Q9H293 177 aa21.39■■□□□ 1.01
CCDC12-213ENST00000605875 CCPG1Q9ULG6 757 aa21.39■■□□□ 1.01
CCDC12-213ENST00000605875 PTGS1P23219 599 aa21.38■■□□□ 1.01
CCDC12-213ENST00000605875 PBX2P40425 430 aa21.38■■□□□ 1.01
CCDC12-213ENST00000605875 ITGA7Q13683 1181 aa21.38■■□□□ 1.01
CCDC12-213ENST00000605875 CCDC96Q2M329 555 aa21.38■■□□□ 1.01
CCDC12-213ENST00000605875 AKNAD1Q5T1N1 836 aa21.38■■□□□ 1.01
CCDC12-213ENST00000605875 TAPT1Q6NXT6 567 aa21.38■■□□□ 1.01
CCDC12-213ENST00000605875 NSMFQ6X4W1 530 aa21.38■■□□□ 1.01
CCDC12-213ENST00000605875 FBXO16Q8IX29 292 aaPredicted RBP21.38■■□□□ 1.01
CCDC12-213ENST00000605875 IL23AQ9NPF7 189 aa21.38■■□□□ 1.01
CCDC12-213ENST00000605875 DCAF4Q8WV16 495 aa21.37■■□□□ 1.01
CCDC12-213ENST00000605875 HIPK3Q9H422 1215 aa21.37■■□□□ 1.01
CCDC12-213ENST00000605875 Q9Y3F1 56 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms