RNA–Protein interactions for RNA: ENST00000603546.1

GNAS-256, Transcript of GNAS complex locus, human

TSL 5

Gene GNAS, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GNAS-256	ENST00000603546	SHH	Q15465	462 aa		32.06	■■■□□ 2.72
GNAS-256	ENST00000603546	SYDE2	Q5VT97	1194 aa		32.06	■■■□□ 2.72
GNAS-256	ENST00000603546	GLT1D1	Q96MS3	346 aa		32.06	■■■□□ 2.72
GNAS-256	ENST00000603546	MTMR10	Q9NXD2	777 aa		32.06	■■■□□ 2.72
GNAS-256	ENST00000603546	NKX3-2	P78367	333 aa		32.05	■■■□□ 2.72
GNAS-256	ENST00000603546	DCDC2C	A8MYV0	355 aa		32.04	■■■□□ 2.72
GNAS-256	ENST00000603546	ZNF213	O14771	459 aa		32.04	■■■□□ 2.72
GNAS-256	ENST00000603546	ASGR1	P07306	291 aa		32.04	■■■□□ 2.72
GNAS-256	ENST00000603546	PDHB	P11177	359 aa		32.04	■■■□□ 2.72
GNAS-256	ENST00000603546	ITGB8	P26012	769 aa		32.04	■■■□□ 2.72
GNAS-256	ENST00000603546	IRX5	P78411	483 aa	Predicted RBP	32.04	■■■□□ 2.72
GNAS-256	ENST00000603546	TNFAIP2	Q03169	654 aa		32.04	■■■□□ 2.72
GNAS-256	ENST00000603546	GNAS	Q5JWF2	1037 aa		32.04	■■■□□ 2.72
GNAS-256	ENST00000603546	FAM109B	Q6ICB4	259 aa	Predicted RBP	32.04	■■■□□ 2.72
GNAS-256	ENST00000603546	CWC27	Q6UX04	472 aa	Known RBP	32.04	■■■□□ 2.72
GNAS-256	ENST00000603546	TBC1D10C	Q8IV04	446 aa		32.04	■■■□□ 2.72
GNAS-256	ENST00000603546	GPCPD1	Q9NPB8	672 aa		32.04	■■■□□ 2.72
GNAS-256	ENST00000603546	TMEM39A	Q9NV64	488 aa		32.04	■■■□□ 2.72
GNAS-256	ENST00000603546	FRMPD2	Q68DX3	1309 aa	Predicted RBP	32.03	■■■□□ 2.72
GNAS-256	ENST00000603546	HIP1	O00291	1037 aa		32.03	■■■□□ 2.72
GNAS-256	ENST00000603546	NT5C2	P49902	561 aa		32.03	■■■□□ 2.72
GNAS-256	ENST00000603546	FAAP100	Q0VG06	881 aa		32.03	■■■□□ 2.72
GNAS-256	ENST00000603546	C9orf50	Q5SZB4	431 aa		32.03	■■■□□ 2.72
GNAS-256	ENST00000603546	NSMF	Q6X4W1	530 aa		32.03	■■■□□ 2.72
GNAS-256	ENST00000603546	ESR2	Q92731	530 aa		32.03	■■■□□ 2.72
GNAS-256	ENST00000603546	DIAPH3	Q9NSV4	1193 aa		32.03	■■■□□ 2.72
GNAS-256	ENST00000603546	ASTN1	O14525	1302 aa		32.02	■■■□□ 2.72
GNAS-256	ENST00000603546	RAG1	P15918	1043 aa		32.02	■■■□□ 2.72
GNAS-256	ENST00000603546	CDK7	P50613	346 aa		32.02	■■■□□ 2.72
GNAS-256	ENST00000603546	PNMA2	Q9UL42	364 aa		32.02	■■■□□ 2.72
GNAS-256	ENST00000603546	CTAGE5	O15320	804 aa		32.01	■■■□□ 2.71
GNAS-256	ENST00000603546	VTI1A	Q96AJ9	217 aa		32.01	■■■□□ 2.71
GNAS-256	ENST00000603546	GNE	Q9Y223	722 aa	Known RBP	32.01	■■■□□ 2.71
GNAS-256	ENST00000603546	MROH7	Q68CQ1	1323 aa		32	■■■□□ 2.71
GNAS-256	ENST00000603546	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	32	■■■□□ 2.71
GNAS-256	ENST00000603546	SNHG28	P0DPA3	235 aa		32	■■■□□ 2.71
GNAS-256	ENST00000603546	ZNF543	Q08ER8	600 aa		32	■■■□□ 2.71
GNAS-256	ENST00000603546	IQSEC1	Q6DN90	963 aa		32	■■■□□ 2.71
GNAS-256	ENST00000603546	NOL8	Q76FK4	1167 aa	Known RBP	32	■■■□□ 2.71
GNAS-256	ENST00000603546	DGKH	Q86XP1	1220 aa		32	■■■□□ 2.71
GNAS-256	ENST00000603546	MORC4	Q8TE76	937 aa		32	■■■□□ 2.71
GNAS-256	ENST00000603546	STXBP5L	Q9Y2K9	1186 aa		32	■■■□□ 2.71
GNAS-256	ENST00000603546	BAAT	Q14032	418 aa	Predicted RBP	31.99	■■■□□ 2.71
GNAS-256	ENST00000603546	ARVCF	O00192	962 aa		31.98	■■■□□ 2.71
GNAS-256	ENST00000603546	CCDC178	Q5BJE1	867 aa		31.98	■■■□□ 2.71
GNAS-256	ENST00000603546	TAPT1	Q6NXT6	567 aa		31.98	■■■□□ 2.71
GNAS-256	ENST00000603546	SLC17A8	Q8NDX2	589 aa		31.98	■■■□□ 2.71
GNAS-256	ENST00000603546	DSCC1	Q9BVC3	393 aa		31.98	■■■□□ 2.71
GNAS-256	ENST00000603546	ADD3	Q9UEY8	706 aa	Known RBP	31.98	■■■□□ 2.71
GNAS-256	ENST00000603546	NEDD4	P46934	1319 aa		31.98	■■■□□ 2.71
GNAS-256	ENST00000603546		A0A0U1RQG5	324 aa	Predicted RBP	31.97	■■■□□ 2.71
GNAS-256	ENST00000603546	PURB	Q96QR8	312 aa	Known RBP	31.97	■■■□□ 2.71
GNAS-256	ENST00000603546	VTA1	Q9NP79	307 aa		31.97	■■■□□ 2.71
GNAS-256	ENST00000603546	PDGFC	Q9NRA1	345 aa		31.97	■■■□□ 2.71
GNAS-256	ENST00000603546		Q9Y3F1	56 aa		31.97	■■■□□ 2.71
GNAS-256	ENST00000603546	DDX49	Q9Y6V7	483 aa	Known RBP	31.97	■■■□□ 2.71
GNAS-256	ENST00000603546	COL6A3	P12111	3177 aa		31.97	■■■□□ 2.71
GNAS-256	ENST00000603546	LOC102724159	A0A0B4J2E5	919 aa		31.96	■■■□□ 2.71
GNAS-256	ENST00000603546	NFIB	O00712	420 aa		31.96	■■■□□ 2.71
GNAS-256	ENST00000603546	SMPD1	P17405	629 aa		31.96	■■■□□ 2.71
GNAS-256	ENST00000603546	BEX3	Q00994	111 aa		31.96	■■■□□ 2.71
GNAS-256	ENST00000603546	PWP2	Q15269	919 aa	Known RBP	31.96	■■■□□ 2.71
GNAS-256	ENST00000603546	GPATCH4	Q5T3I0	446 aa	Known RBP	31.96	■■■□□ 2.71
GNAS-256	ENST00000603546	EEPD1	Q7L9B9	569 aa		31.96	■■■□□ 2.71
GNAS-256	ENST00000603546	TLK2	Q86UE8	772 aa		31.96	■■■□□ 2.71
GNAS-256	ENST00000603546	IQCA1	Q86XH1	822 aa		31.96	■■■□□ 2.71
GNAS-256	ENST00000603546	ZKSCAN3	Q9BRR0	538 aa		31.96	■■■□□ 2.71
GNAS-256	ENST00000603546	AP5M1	Q9H0R1	490 aa		31.96	■■■□□ 2.71
GNAS-256	ENST00000603546	SUPT16H	Q9Y5B9	1047 aa	Known RBP	31.96	■■■□□ 2.71
GNAS-256	ENST00000603546	DYNC1LI2	O43237	492 aa	Predicted RBP	31.95	■■■□□ 2.71
GNAS-256	ENST00000603546	TIMP1	P01033	207 aa		31.95	■■■□□ 2.71
GNAS-256	ENST00000603546	FPGS	Q05932	587 aa		31.95	■■■□□ 2.71
GNAS-256	ENST00000603546	CLEC4D	Q8WXI8	215 aa		31.95	■■■□□ 2.71
GNAS-256	ENST00000603546	CTNNA3	Q9UI47	895 aa		31.95	■■■□□ 2.71
GNAS-256	ENST00000603546	TBX21	Q9UL17	535 aa		31.95	■■■□□ 2.71
GNAS-256	ENST00000603546	LAMA2	P24043	3122 aa	Known RBP	31.94	■■■□□ 2.7
GNAS-256	ENST00000603546	KDM4A	O75164	1064 aa		31.94	■■■□□ 2.7
GNAS-256	ENST00000603546	CABYR	O75952	493 aa		31.94	■■■□□ 2.7
GNAS-256	ENST00000603546	EPHB4	P54760	987 aa		31.94	■■■□□ 2.7
GNAS-256	ENST00000603546	FBXO16	Q8IX29	292 aa	Predicted RBP	31.94	■■■□□ 2.7
GNAS-256	ENST00000603546	ANKS1A	Q92625	1134 aa		31.94	■■■□□ 2.7
GNAS-256	ENST00000603546	WDR19	Q8NEZ3	1342 aa		31.94	■■■□□ 2.7
GNAS-256	ENST00000603546	PTPDC1	A2A3K4	754 aa		31.93	■■■□□ 2.7
GNAS-256	ENST00000603546	ZEB2	O60315	1214 aa		31.93	■■■□□ 2.7
GNAS-256	ENST00000603546	ALDH5A1	P51649	535 aa	Predicted RBP	31.93	■■■□□ 2.7
GNAS-256	ENST00000603546	SMAD3	P84022	425 aa	Known RBP	31.93	■■■□□ 2.7
GNAS-256	ENST00000603546	FSCN1	Q16658	493 aa	Known RBP	31.93	■■■□□ 2.7
GNAS-256	ENST00000603546	IMMT	Q16891	758 aa	Known RBP	31.93	■■■□□ 2.7
GNAS-256	ENST00000603546	KIAA1211	Q6ZU35	1233 aa		31.93	■■■□□ 2.7
GNAS-256	ENST00000603546	LCT	P09848	1927 aa		31.92	■■■□□ 2.7
GNAS-256	ENST00000603546	ZNF697	Q5TEC3	545 aa		31.92	■■■□□ 2.7
GNAS-256	ENST00000603546	RNF207	Q6ZRF8	634 aa		31.92	■■■□□ 2.7
GNAS-256	ENST00000603546	FAM126B	Q8IXS8	530 aa		31.92	■■■□□ 2.7
GNAS-256	ENST00000603546	TLR3	O15455	904 aa	Known RBP	31.91	■■■□□ 2.7
GNAS-256	ENST00000603546	MFSD5	Q6N075	450 aa		31.91	■■■□□ 2.7
GNAS-256	ENST00000603546	CXCL17	Q6UXB2	119 aa		31.91	■■■□□ 2.7
GNAS-256	ENST00000603546	PNMA1	Q8ND90	353 aa		31.91	■■■□□ 2.7
GNAS-256	ENST00000603546	ZSWIM5	Q9P217	1185 aa		31.91	■■■□□ 2.7
GNAS-256	ENST00000603546		B4E1Z4	1266 aa		31.9	■■■□□ 2.7
GNAS-256	ENST00000603546	GOLGA8H	P0CJ92	632 aa		31.9	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms