RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 SLC6A18Q96N87 628 aa4.53□□□□□ -1.68
SGMS1-207ENST00000602619 CRBNQ96SW2 442 aa4.53□□□□□ -1.68
SGMS1-207ENST00000602619 PHAXQ9H814 394 aaKnown RBP4.53□□□□□ -1.68
SGMS1-207ENST00000602619 ZNF408Q9H9D4 720 aa4.53□□□□□ -1.68
SGMS1-207ENST00000602619 PCDHA5Q9Y5H7 936 aa4.53□□□□□ -1.68
SGMS1-207ENST00000602619 ABLIM1O14639 778 aa4.52□□□□□ -1.69
SGMS1-207ENST00000602619 MATN3O15232 486 aa4.52□□□□□ -1.69
SGMS1-207ENST00000602619 SHOXO15266 292 aa4.52□□□□□ -1.69
SGMS1-207ENST00000602619 KLF4O43474 513 aa4.52□□□□□ -1.69
SGMS1-207ENST00000602619 CLEC3AO75596 197 aa4.52□□□□□ -1.69
SGMS1-207ENST00000602619 KIR2DL1P43626 348 aaPredicted RBP4.52□□□□□ -1.69
SGMS1-207ENST00000602619 KIR2DL2P43627 348 aaPredicted RBP4.52□□□□□ -1.69
SGMS1-207ENST00000602619 NCKAP1LP55160 1127 aa4.52□□□□□ -1.69
SGMS1-207ENST00000602619 ERVFRD-1P60508 538 aa4.52□□□□□ -1.69
SGMS1-207ENST00000602619 SF3A1Q15459 793 aaKnown RBP4.52□□□□□ -1.69
SGMS1-207ENST00000602619 ZNF827Q17R98 1081 aa4.52□□□□□ -1.69
SGMS1-207ENST00000602619 NBPF9Q3BBW0 867 aa4.52□□□□□ -1.69
SGMS1-207ENST00000602619 BBS9Q3SYG4 887 aa4.52□□□□□ -1.69
SGMS1-207ENST00000602619 UBXN11Q5T124 520 aa4.52□□□□□ -1.69
SGMS1-207ENST00000602619 CEP128Q6ZU80 1094 aa4.52□□□□□ -1.69
SGMS1-207ENST00000602619 ENOX1Q8TC92 643 aaKnown RBP4.52□□□□□ -1.69
SGMS1-207ENST00000602619 PLCD4Q9BRC7 762 aa4.52□□□□□ -1.69
SGMS1-207ENST00000602619 ZMYM5Q9UJ78 669 aa4.52□□□□□ -1.69
SGMS1-207ENST00000602619 C9IYK1 514 aa4.51□□□□□ -1.69
SGMS1-207ENST00000602619 BUB1BO60566 1050 aaPredicted RBP4.51□□□□□ -1.69
SGMS1-207ENST00000602619 SSBP05455 408 aaKnown RBP eCLIP4.51□□□□□ -1.69
SGMS1-207ENST00000602619 ETFBP38117 255 aa4.51□□□□□ -1.69
SGMS1-207ENST00000602619 ADAM17P78536 824 aa4.51□□□□□ -1.69
SGMS1-207ENST00000602619 KIR3DS1Q14943 382 aa4.51□□□□□ -1.69
SGMS1-207ENST00000602619 NBPF6Q5VWK0 638 aa4.51□□□□□ -1.69
SGMS1-207ENST00000602619 FBXW10Q5XX13 1052 aa4.51□□□□□ -1.69
SGMS1-207ENST00000602619 OLFML2BQ68BL8 750 aa4.51□□□□□ -1.69
SGMS1-207ENST00000602619 WAPLQ7Z5K2 1190 aa4.51□□□□□ -1.69
SGMS1-207ENST00000602619 CPLX3Q8WVH0 158 aa4.51□□□□□ -1.69
SGMS1-207ENST00000602619 SREK1Q8WXA9 508 aaKnown RBP4.51□□□□□ -1.69
SGMS1-207ENST00000602619 KLHL6Q8WZ60 621 aa4.51□□□□□ -1.69
SGMS1-207ENST00000602619 MAP6Q96JE9 813 aa4.51□□□□□ -1.69
SGMS1-207ENST00000602619 NBPF4Q96M43 638 aa4.51□□□□□ -1.69
SGMS1-207ENST00000602619 SORCS2Q96PQ0 1159 aa4.51□□□□□ -1.69
SGMS1-207ENST00000602619 SRRDQ9UH36 339 aa4.51□□□□□ -1.69
SGMS1-207ENST00000602619 SMAD7O15105 426 aaKnown RBP4.5□□□□□ -1.69
SGMS1-207ENST00000602619 MPOP05164 745 aa4.5□□□□□ -1.69
SGMS1-207ENST00000602619 CAP1Q01518 475 aa4.5□□□□□ -1.69
SGMS1-207ENST00000602619 RBL2Q08999 1139 aa4.5□□□□□ -1.69
SGMS1-207ENST00000602619 AUHQ13825 339 aaKnown RBP4.5□□□□□ -1.69
SGMS1-207ENST00000602619 CLEC16AQ2KHT3 1053 aa4.5□□□□□ -1.69
SGMS1-207ENST00000602619 RNF111Q6ZNA4 994 aa4.5□□□□□ -1.69
SGMS1-207ENST00000602619 TMC6Q7Z403 805 aa4.5□□□□□ -1.69
SGMS1-207ENST00000602619 SYTL5Q8TDW5 730 aaPredicted RBP4.5□□□□□ -1.69
SGMS1-207ENST00000602619 ANAPC16Q96DE5 110 aa4.5□□□□□ -1.69
SGMS1-207ENST00000602619 HHIPL1Q96JK4 782 aa4.5□□□□□ -1.69
SGMS1-207ENST00000602619 HDAC8Q9BY41 377 aa4.5□□□□□ -1.69
SGMS1-207ENST00000602619 TANGO6Q9C0B7 1094 aa4.5□□□□□ -1.69
SGMS1-207ENST00000602619 TMEM82A0PJX8 343 aa4.49□□□□□ -1.69
SGMS1-207ENST00000602619 CBFA2T2O43439 604 aa4.49□□□□□ -1.69
SGMS1-207ENST00000602619 SIGLEC6O43699 453 aa4.49□□□□□ -1.69
SGMS1-207ENST00000602619 ZNF143P52747 638 aaPredicted RBP4.49□□□□□ -1.69
SGMS1-207ENST00000602619 SERINC3Q13530 473 aa4.49□□□□□ -1.69
SGMS1-207ENST00000602619 AXDND1Q5T1B0 1012 aaPredicted RBP4.49□□□□□ -1.69
SGMS1-207ENST00000602619 ADGRG2Q8IZP9 1017 aa4.49□□□□□ -1.69
SGMS1-207ENST00000602619 ZNF513Q8N8E2 541 aaPredicted RBP4.49□□□□□ -1.69
SGMS1-207ENST00000602619 DAGLBQ8NCG7 672 aa4.49□□□□□ -1.69
SGMS1-207ENST00000602619 KLHL25Q9H0H3 589 aa4.49□□□□□ -1.69
SGMS1-207ENST00000602619 ACTR10Q9NZ32 417 aa4.49□□□□□ -1.69
SGMS1-207ENST00000602619 SUSD2Q9UGT4 822 aa4.49□□□□□ -1.69
SGMS1-207ENST00000602619 MRVI1Q9Y6F6 885 aa4.49□□□□□ -1.69
SGMS1-207ENST00000602619 IRS2Q9Y4H2 1338 aa4.48□□□□□ -1.69
SGMS1-207ENST00000602619 A0A087WZG4 1122 aa4.48□□□□□ -1.69
SGMS1-207ENST00000602619 ATP2B1P20020 1258 aa4.48□□□□□ -1.69
SGMS1-207ENST00000602619 IGFBP6P24592 240 aaPredicted RBP4.48□□□□□ -1.69
SGMS1-207ENST00000602619 RTP1P59025 263 aa4.48□□□□□ -1.69
SGMS1-207ENST00000602619 NMIQ13287 307 aaPredicted RBP4.48□□□□□ -1.69
SGMS1-207ENST00000602619 SNW1Q13573 536 aaKnown RBP4.48□□□□□ -1.69
SGMS1-207ENST00000602619 RAB33AQ14088 237 aa4.48□□□□□ -1.69
SGMS1-207ENST00000602619 NCAPHQ15003 741 aa4.48□□□□□ -1.69
SGMS1-207ENST00000602619 NT5DC1Q5TFE4 455 aa4.48□□□□□ -1.69
SGMS1-207ENST00000602619 ZPBP2Q6X784 338 aa4.48□□□□□ -1.69
SGMS1-207ENST00000602619 C7orf61Q8IZ16 206 aa4.48□□□□□ -1.69
SGMS1-207ENST00000602619 ZNF655Q8N720 491 aaPredicted RBP4.48□□□□□ -1.69
SGMS1-207ENST00000602619 HAUS7Q99871 368 aa4.48□□□□□ -1.69
SGMS1-207ENST00000602619 FOXP3Q9BZS1 431 aa4.48□□□□□ -1.69
SGMS1-207ENST00000602619 PRDM14Q9GZV8 571 aa4.48□□□□□ -1.69
SGMS1-207ENST00000602619 SCAND2PQ9GZW5 306 aaPredicted RBP4.48□□□□□ -1.69
SGMS1-207ENST00000602619 MSRB2Q9Y3D2 182 aa4.48□□□□□ -1.69
SGMS1-207ENST00000602619 DUSP10Q9Y6W6 482 aa4.48□□□□□ -1.69
SGMS1-207ENST00000602619 A0A1B0GTL3 188 aa4.47□□□□□ -1.69
SGMS1-207ENST00000602619 LIMS1P48059 325 aa4.47□□□□□ -1.69
SGMS1-207ENST00000602619 HMGA2P52926 109 aa4.47□□□□□ -1.69
SGMS1-207ENST00000602619 SLC7A5Q01650 507 aa4.47□□□□□ -1.69
SGMS1-207ENST00000602619 RAB3GAP1Q15042 981 aa4.47□□□□□ -1.69
SGMS1-207ENST00000602619 VWA3BQ502W6 1294 aa4.47□□□□□ -1.69
SGMS1-207ENST00000602619 ANKS3Q6ZW76 656 aa4.47□□□□□ -1.69
SGMS1-207ENST00000602619 ZNF512BQ96KM6 892 aaPredicted RBP4.47□□□□□ -1.69
SGMS1-207ENST00000602619 MENTQ9BUN1 341 aa4.47□□□□□ -1.69
SGMS1-207ENST00000602619 HIRIP3Q9BW71 556 aaPredicted RBP4.47□□□□□ -1.69
SGMS1-207ENST00000602619 MKRN2Q9H000 416 aaKnown RBP4.47□□□□□ -1.69
SGMS1-207ENST00000602619 GP6Q9HCN6 339 aa4.47□□□□□ -1.69
SGMS1-207ENST00000602619 USP40Q9NVE5 1235 aa4.47□□□□□ -1.69
SGMS1-207ENST00000602619 SMPD4Q9NXE4 827 aa4.47□□□□□ -1.69
SGMS1-207ENST00000602619 PCDHB12Q9Y5F1 795 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms