RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 GFRA1P56159 465 aa10.78□□□□□ -0.68
SGMS1-206ENST00000602565 RTP2Q5QGT7 225 aa10.78□□□□□ -0.68
SGMS1-206ENST00000602565 EEF1DP3Q658K8 133 aa10.78□□□□□ -0.68
SGMS1-206ENST00000602565 SCUBE1Q8IWY4 988 aa10.78□□□□□ -0.68
SGMS1-206ENST00000602565 TP53INP2Q8IXH6 220 aa10.78□□□□□ -0.68
SGMS1-206ENST00000602565 TMEM260Q9NX78 707 aa10.78□□□□□ -0.68
SGMS1-206ENST00000602565 SLAMF8Q9P0V8 285 aa10.78□□□□□ -0.68
SGMS1-206ENST00000602565 L1CAMP32004 1257 aa10.77□□□□□ -0.69
SGMS1-206ENST00000602565 SQSTM1Q13501 440 aa10.77□□□□□ -0.69
SGMS1-206ENST00000602565 SF1Q15637 639 aaKnown RBP10.77□□□□□ -0.69
SGMS1-206ENST00000602565 RCSD1Q6JBY9 416 aa10.77□□□□□ -0.69
SGMS1-206ENST00000602565 ALPK1Q96QP1 1244 aa10.77□□□□□ -0.69
SGMS1-206ENST00000602565 DHRS4Q9BTZ2 278 aa10.77□□□□□ -0.69
SGMS1-206ENST00000602565 TMX1Q9H3N1 280 aa10.77□□□□□ -0.69
SGMS1-206ENST00000602565 CCDC163A0A0D9SF12 145 aa10.76□□□□□ -0.69
SGMS1-206ENST00000602565 TMEM82A0PJX8 343 aa10.76□□□□□ -0.69
SGMS1-206ENST00000602565 SUMO1P63165 101 aaKnown RBP10.76□□□□□ -0.69
SGMS1-206ENST00000602565 MAP4K2Q12851 820 aa10.76□□□□□ -0.69
SGMS1-206ENST00000602565 DUSP4Q13115 394 aa10.76□□□□□ -0.69
SGMS1-206ENST00000602565 LRP8Q14114 963 aa10.76□□□□□ -0.69
SGMS1-206ENST00000602565 PLCL1Q15111 1095 aa10.76□□□□□ -0.69
SGMS1-206ENST00000602565 FAM209AQ5JX71 171 aa10.76□□□□□ -0.69
SGMS1-206ENST00000602565 FOXB2Q5VYV0 432 aa10.76□□□□□ -0.69
SGMS1-206ENST00000602565 ZPBP2Q6X784 338 aa10.76□□□□□ -0.69
SGMS1-206ENST00000602565 NOL8Q76FK4 1167 aaKnown RBP10.76□□□□□ -0.69
SGMS1-206ENST00000602565 TMEM145Q8NBT3 493 aa10.76□□□□□ -0.69
SGMS1-206ENST00000602565 AGBL5Q8NDL9 886 aa10.76□□□□□ -0.69
SGMS1-206ENST00000602565 EXOC2Q96KP1 924 aa10.76□□□□□ -0.69
SGMS1-206ENST00000602565 FCRL2Q96LA5 508 aaPredicted RBP10.76□□□□□ -0.69
SGMS1-206ENST00000602565 SCG5P05408 212 aa10.75□□□□□ -0.69
SGMS1-206ENST00000602565 THBDP07204 575 aa10.75□□□□□ -0.69
SGMS1-206ENST00000602565 PRSS53Q2L4Q9 553 aa10.75□□□□□ -0.69
SGMS1-206ENST00000602565 COPS5Q92905 334 aa10.75□□□□□ -0.69
SGMS1-206ENST00000602565 GPRC5CQ9NQ84 441 aa10.75□□□□□ -0.69
SGMS1-206ENST00000602565 PAK6Q9NQU5 681 aaPredicted RBP10.75□□□□□ -0.69
SGMS1-206ENST00000602565 MRPS23Q9Y3D9 190 aaKnown RBP10.75□□□□□ -0.69
SGMS1-206ENST00000602565 FGF10O15520 208 aaPredicted RBP10.74□□□□□ -0.69
SGMS1-206ENST00000602565 DLX3O60479 287 aa10.74□□□□□ -0.69
SGMS1-206ENST00000602565 CAPNS1P04632 268 aa10.74□□□□□ -0.69
SGMS1-206ENST00000602565 FUT4P22083 530 aa10.74□□□□□ -0.69
SGMS1-206ENST00000602565 CYP2R1Q6VVX0 501 aa10.74□□□□□ -0.69
SGMS1-206ENST00000602565 WFDC3Q8IUB2 231 aa10.74□□□□□ -0.69
SGMS1-206ENST00000602565 PI4K2BQ8TCG2 481 aa10.74□□□□□ -0.69
SGMS1-206ENST00000602565 OSBP2Q969R2 916 aa10.74□□□□□ -0.69
SGMS1-206ENST00000602565 CCDC120Q96HB5 630 aa10.74□□□□□ -0.69
SGMS1-206ENST00000602565 PRDM7Q9NQW5 492 aa10.74□□□□□ -0.69
SGMS1-206ENST00000602565 TRBV23OR9-2A0A075B6M9 112 aa10.73□□□□□ -0.69
SGMS1-206ENST00000602565 TBC1D8O95759 1140 aa10.73□□□□□ -0.69
SGMS1-206ENST00000602565 PAMP19021 973 aa10.73□□□□□ -0.69
SGMS1-206ENST00000602565 SLC23A3Q6PIS1 610 aa10.73□□□□□ -0.69
SGMS1-206ENST00000602565 PTCHD1Q96NR3 888 aa10.73□□□□□ -0.69
SGMS1-206ENST00000602565 SLKQ9H2G2 1235 aaPredicted RBP10.73□□□□□ -0.69
SGMS1-206ENST00000602565 TMEM59LQ9UK28 342 aa10.73□□□□□ -0.69
SGMS1-206ENST00000602565 DNAJC25-GNG10A0A024R161 153 aa10.72□□□□□ -0.69
SGMS1-206ENST00000602565 MEFVO15553 781 aaPredicted RBP10.72□□□□□ -0.69
SGMS1-206ENST00000602565 PLS3P13797 630 aa10.72□□□□□ -0.69
SGMS1-206ENST00000602565 TCEA2Q15560 299 aa10.72□□□□□ -0.69
SGMS1-206ENST00000602565 PLEKHG4Q58EX7 1191 aa10.72□□□□□ -0.69
SGMS1-206ENST00000602565 RALGPS1Q5JS13 557 aa10.72□□□□□ -0.69
SGMS1-206ENST00000602565 USP53Q70EK8 1073 aa10.72□□□□□ -0.69
SGMS1-206ENST00000602565 PPIL6Q8IXY8 311 aa10.72□□□□□ -0.69
SGMS1-206ENST00000602565 ERVK13-1Q9NX77 482 aa10.72□□□□□ -0.69
SGMS1-206ENST00000602565 CLEC1BQ9P126 229 aa10.72□□□□□ -0.69
SGMS1-206ENST00000602565 PRKAB1Q9Y478 270 aa10.72□□□□□ -0.69
SGMS1-206ENST00000602565 NPHP3-ACAD11A0A0J9YXS1 232 aa10.71□□□□□ -0.69
SGMS1-206ENST00000602565 PPP1R12AO14974 1030 aaPredicted RBP10.71□□□□□ -0.69
SGMS1-206ENST00000602565 DNAJC6O75061 913 aa10.71□□□□□ -0.69
SGMS1-206ENST00000602565 ASMTLO95671 621 aa10.71□□□□□ -0.69
SGMS1-206ENST00000602565 LAPTM5Q13571 262 aa10.71□□□□□ -0.69
SGMS1-206ENST00000602565 C16orf86Q6ZW13 317 aa10.71□□□□□ -0.69
SGMS1-206ENST00000602565 FILIP1Q7Z7B0 1213 aa10.71□□□□□ -0.69
SGMS1-206ENST00000602565 MAP6Q96JE9 813 aa10.71□□□□□ -0.69
SGMS1-206ENST00000602565 ADAMTS10Q9H324 1103 aa10.71□□□□□ -0.69
SGMS1-206ENST00000602565 COL4A3BPQ9Y5P4 624 aa10.71□□□□□ -0.69
SGMS1-206ENST00000602565 HYAL3O43820 417 aaPredicted RBP10.7□□□□□ -0.7
SGMS1-206ENST00000602565 HK2P52789 917 aa10.7□□□□□ -0.7
SGMS1-206ENST00000602565 SLC35F1Q5T1Q4 408 aa10.7□□□□□ -0.7
SGMS1-206ENST00000602565 NFXL1Q6ZNB6 911 aa10.7□□□□□ -0.7
SGMS1-206ENST00000602565 SYNPOQ8N3V7 929 aa10.7□□□□□ -0.7
SGMS1-206ENST00000602565 FRS2Q8WU20 508 aa10.7□□□□□ -0.7
SGMS1-206ENST00000602565 KISS1RQ969F8 398 aaPredicted RBP10.7□□□□□ -0.7
SGMS1-206ENST00000602565 SPC25Q9HBM1 224 aa10.7□□□□□ -0.7
SGMS1-206ENST00000602565 ZNF281Q9Y2X9 895 aa10.7□□□□□ -0.7
SGMS1-206ENST00000602565 ZGLP1P0C6A0 271 aa10.69□□□□□ -0.7
SGMS1-206ENST00000602565 CYP4F3Q08477 520 aa10.69□□□□□ -0.7
SGMS1-206ENST00000602565 TAF7LQ5H9L4 462 aa10.69□□□□□ -0.7
SGMS1-206ENST00000602565 ACBD5Q5T8D3 534 aaPredicted RBP10.69□□□□□ -0.7
SGMS1-206ENST00000602565 HLA-DQA1Q5Y7H0 255 aa10.69□□□□□ -0.7
SGMS1-206ENST00000602565 E4F1Q66K89 784 aaPredicted RBP10.69□□□□□ -0.7
SGMS1-206ENST00000602565 IQCEQ6IPM2 695 aa10.69□□□□□ -0.7
SGMS1-206ENST00000602565 JAMLQ86YT9 394 aa10.69□□□□□ -0.7
SGMS1-206ENST00000602565 NPLOC4Q8TAT6 608 aa10.69□□□□□ -0.7
SGMS1-206ENST00000602565 C1orf159Q96HA4 380 aa10.69□□□□□ -0.7
SGMS1-206ENST00000602565 IFT57Q9NWB7 429 aa10.69□□□□□ -0.7
SGMS1-206ENST00000602565 TNFRSF10DQ9UBN6 386 aa10.69□□□□□ -0.7
SGMS1-206ENST00000602565 BLACEA4D250 179 aa10.68□□□□□ -0.7
SGMS1-206ENST00000602565 KCNAB2Q13303 367 aa10.68□□□□□ -0.7
SGMS1-206ENST00000602565 XP32Q5T750 250 aa10.68□□□□□ -0.7
SGMS1-206ENST00000602565 OXR1Q8N573 874 aa10.68□□□□□ -0.7
SGMS1-206ENST00000602565 DIO2Q92813 273 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms