RNA–Protein interactions for RNA: ENST00000602222.5

SMG9-213, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-213ENST00000602222 MCM3APO60318 1980 aa17.86■□□□□ 0.45
SMG9-213ENST00000602222 SDSP20132 328 aa17.86■□□□□ 0.45
SMG9-213ENST00000602222 NT5C2P49902 561 aa17.86■□□□□ 0.45
SMG9-213ENST00000602222 MFAP1P55081 439 aaKnown RBP17.86■□□□□ 0.45
SMG9-213ENST00000602222 SNAP25P60880 206 aa17.86■□□□□ 0.45
SMG9-213ENST00000602222 IRX5P78411 483 aaPredicted RBP17.86■□□□□ 0.45
SMG9-213ENST00000602222 SMAD3P84022 425 aaKnown RBP17.86■□□□□ 0.45
SMG9-213ENST00000602222 NUCB1Q02818 461 aa17.86■□□□□ 0.45
SMG9-213ENST00000602222 TNFAIP2Q03169 654 aa17.86■□□□□ 0.45
SMG9-213ENST00000602222 CCDC96Q2M329 555 aa17.86■□□□□ 0.45
SMG9-213ENST00000602222 RRP12Q5JTH9 1297 aaKnown RBP17.86■□□□□ 0.45
SMG9-213ENST00000602222 GNASQ5JWF2 1037 aa17.86■□□□□ 0.45
SMG9-213ENST00000602222 AKNAD1Q5T1N1 836 aa17.86■□□□□ 0.45
SMG9-213ENST00000602222 SYDE2Q5VT97 1194 aa17.86■□□□□ 0.45
SMG9-213ENST00000602222 TTBK2Q6IQ55 1244 aa17.86■□□□□ 0.45
SMG9-213ENST00000602222 RILPL2Q969X0 211 aa17.86■□□□□ 0.45
SMG9-213ENST00000602222 TBX21Q9UL17 535 aa17.86■□□□□ 0.45
SMG9-213ENST00000602222 GNEQ9Y223 722 aaKnown RBP17.86■□□□□ 0.45
SMG9-213ENST00000602222 ASTN1O14525 1302 aa17.86■□□□□ 0.45
SMG9-213ENST00000602222 MROH7Q68CQ1 1323 aa17.86■□□□□ 0.45
SMG9-213ENST00000602222 A0A0C4DFX4 3053 aa17.85■□□□□ 0.45
SMG9-213ENST00000602222 IGHDP01880 384 aa17.85■□□□□ 0.45
SMG9-213ENST00000602222 IQSEC1Q6DN90 963 aa17.85■□□□□ 0.45
SMG9-213ENST00000602222 MFSD6Q6ZSS7 791 aa17.85■□□□□ 0.45
SMG9-213ENST00000602222 RNF41Q9H4P4 317 aaPredicted RBP17.85■□□□□ 0.45
SMG9-213ENST00000602222 PNMA2Q9UL42 364 aa17.85■□□□□ 0.45
SMG9-213ENST00000602222 Q9Y3F1 56 aa17.85■□□□□ 0.45
SMG9-213ENST00000602222 LOC102724159A0A0B4J2E5 919 aa17.84■□□□□ 0.45
SMG9-213ENST00000602222 A0A0U1RQG5 324 aaPredicted RBP17.84■□□□□ 0.45
SMG9-213ENST00000602222 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.84■□□□□ 0.45
SMG9-213ENST00000602222 ARVCFO00192 962 aa17.84■□□□□ 0.45
SMG9-213ENST00000602222 TIMP1P01033 207 aa17.84■□□□□ 0.45
SMG9-213ENST00000602222 SNHG28P0DPA3 235 aa17.84■□□□□ 0.45
SMG9-213ENST00000602222 PDHBP11177 359 aa17.84■□□□□ 0.45
SMG9-213ENST00000602222 SLC16A2P36021 539 aa17.84■□□□□ 0.45
SMG9-213ENST00000602222 EPHB4P54760 987 aa17.84■□□□□ 0.45
SMG9-213ENST00000602222 HAND2P61296 217 aa17.84■□□□□ 0.45
SMG9-213ENST00000602222 FPGSQ05932 587 aa17.84■□□□□ 0.45
SMG9-213ENST00000602222 PWP2Q15269 919 aaKnown RBP17.84■□□□□ 0.45
SMG9-213ENST00000602222 B4GALNT3Q6L9W6 998 aa17.84■□□□□ 0.45
SMG9-213ENST00000602222 TAPT1Q6NXT6 567 aa17.84■□□□□ 0.45
SMG9-213ENST00000602222 GUCD1Q96NT3 240 aa17.84■□□□□ 0.45
SMG9-213ENST00000602222 MTMR7Q9Y216 660 aa17.84■□□□□ 0.45
SMG9-213ENST00000602222 CUL9Q8IWT3 2517 aa17.83■□□□□ 0.45
SMG9-213ENST00000602222 CABYRO75952 493 aa17.83■□□□□ 0.44
SMG9-213ENST00000602222 ZNF697Q5TEC3 545 aa17.83■□□□□ 0.44
SMG9-213ENST00000602222 NSMFQ6X4W1 530 aa17.83■□□□□ 0.44
SMG9-213ENST00000602222 TBC1D10CQ8IV04 446 aa17.83■□□□□ 0.44
SMG9-213ENST00000602222 SLC43A3Q8NBI5 491 aa17.83■□□□□ 0.44
SMG9-213ENST00000602222 VTA1Q9NP79 307 aa17.83■□□□□ 0.44
SMG9-213ENST00000602222 FRMPD2Q68DX3 1309 aaPredicted RBP17.82■□□□□ 0.44
SMG9-213ENST00000602222 SMPD1P17405 629 aa17.82■□□□□ 0.44
SMG9-213ENST00000602222 ZNF543Q08ER8 600 aa17.82■□□□□ 0.44
SMG9-213ENST00000602222 BAATQ14032 418 aaPredicted RBP17.82■□□□□ 0.44
SMG9-213ENST00000602222 MFSD5Q6N075 450 aa17.82■□□□□ 0.44
SMG9-213ENST00000602222 TLK2Q86UE8 772 aa17.82■□□□□ 0.44
SMG9-213ENST00000602222 DGKHQ86XP1 1220 aa17.82■□□□□ 0.44
SMG9-213ENST00000602222 FAM126BQ8IXS8 530 aa17.82■□□□□ 0.44
SMG9-213ENST00000602222 ESR2Q92731 530 aa17.82■□□□□ 0.44
SMG9-213ENST00000602222 VTI1AQ96AJ9 217 aa17.82■□□□□ 0.44
SMG9-213ENST00000602222 SEZ6LQ9BYH1 1024 aa17.82■□□□□ 0.44
SMG9-213ENST00000602222 SEMA6BQ9H3T3 888 aa17.82■□□□□ 0.44
SMG9-213ENST00000602222 GPCPD1Q9NPB8 672 aa17.82■□□□□ 0.44
SMG9-213ENST00000602222 ADD3Q9UEY8 706 aaKnown RBP17.82■□□□□ 0.44
SMG9-213ENST00000602222 WDR19Q8NEZ3 1342 aa17.81■□□□□ 0.44
SMG9-213ENST00000602222 HIP1O00291 1037 aa17.81■□□□□ 0.44
SMG9-213ENST00000602222 ZNF213O14771 459 aa17.81■□□□□ 0.44
SMG9-213ENST00000602222 BEX3Q00994 111 aa17.81■□□□□ 0.44
SMG9-213ENST00000602222 FSCN1Q16658 493 aaKnown RBP17.81■□□□□ 0.44
SMG9-213ENST00000602222 CCDC178Q5BJE1 867 aa17.81■□□□□ 0.44
SMG9-213ENST00000602222 NOL8Q76FK4 1167 aaKnown RBP17.81■□□□□ 0.44
SMG9-213ENST00000602222 EXOC6Q8TAG9 804 aa17.81■□□□□ 0.44
SMG9-213ENST00000602222 CLEC4DQ8WXI8 215 aa17.81■□□□□ 0.44
SMG9-213ENST00000602222 ANKS1AQ92625 1134 aa17.81■□□□□ 0.44
SMG9-213ENST00000602222 RNPC3Q96LT9 517 aaKnown RBP17.81■□□□□ 0.44
SMG9-213ENST00000602222 PURBQ96QR8 312 aaKnown RBP17.81■□□□□ 0.44
SMG9-213ENST00000602222 AP5M1Q9H0R1 490 aa17.81■□□□□ 0.44
SMG9-213ENST00000602222 PDGFCQ9NRA1 345 aa17.81■□□□□ 0.44
SMG9-213ENST00000602222 TMEM265A0A087WTH1 108 aa17.8■□□□□ 0.44
SMG9-213ENST00000602222 NFIBO00712 420 aa17.8■□□□□ 0.44
SMG9-213ENST00000602222 TLR3O15455 904 aaKnown RBP17.8■□□□□ 0.44
SMG9-213ENST00000602222 DYNC1LI2O43237 492 aaPredicted RBP17.8■□□□□ 0.44
SMG9-213ENST00000602222 ZEB2O60315 1214 aa17.8■□□□□ 0.44
SMG9-213ENST00000602222 CD4P01730 458 aa17.8■□□□□ 0.44
SMG9-213ENST00000602222 GPATCH4Q5T3I0 446 aaKnown RBP17.8■□□□□ 0.44
SMG9-213ENST00000602222 FBXO16Q8IX29 292 aaPredicted RBP17.8■□□□□ 0.44
SMG9-213ENST00000602222 YTHDC1Q96MU7 727 aaKnown RBP17.8■□□□□ 0.44
SMG9-213ENST00000602222 DDX49Q9Y6V7 483 aaKnown RBP17.8■□□□□ 0.44
SMG9-213ENST00000602222 NEDD4P46934 1319 aa17.79■□□□□ 0.44
SMG9-213ENST00000602222 RBM47A0AV96 593 aaKnown RBP17.79■□□□□ 0.44
SMG9-213ENST00000602222 ALDH5A1P51649 535 aaPredicted RBP17.79■□□□□ 0.44
SMG9-213ENST00000602222 PPIGQ13427 754 aaKnown RBP eCLIP17.79■□□□□ 0.446e-6■■□□□ 12.8
SMG9-213ENST00000602222 DUSP28Q4G0W2 176 aa17.79■□□□□ 0.44
SMG9-213ENST00000602222 CWC27Q6UX04 472 aaKnown RBP17.79■□□□□ 0.44
SMG9-213ENST00000602222 CXCL17Q6UXB2 119 aa17.79■□□□□ 0.44
SMG9-213ENST00000602222 EEPD1Q7L9B9 569 aa17.79■□□□□ 0.44
SMG9-213ENST00000602222 FAM161BQ96MY7 647 aa17.79■□□□□ 0.44
SMG9-213ENST00000602222 DSCC1Q9BVC3 393 aa17.79■□□□□ 0.44
SMG9-213ENST00000602222 MAF1Q9H063 256 aa17.79■□□□□ 0.44
SMG9-213ENST00000602222 DIAPH3Q9NSV4 1193 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms