RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 SMC5Q8IY18 1101 aa27.46■■□□□ 1.99
GTPBP3-227ENST00000602056 RANBP17Q9H2T7 1088 aaKnown RBP27.46■■□□□ 1.99
GTPBP3-227ENST00000602056 SEMA6BQ9H3T3 888 aa27.46■■□□□ 1.99
GTPBP3-227ENST00000602056 SPC25Q9HBM1 224 aa27.46■■□□□ 1.99
GTPBP3-227ENST00000602056 TOMM22Q9NS69 142 aa27.46■■□□□ 1.99
GTPBP3-227ENST00000602056 CCPG1Q9ULG6 757 aa27.46■■□□□ 1.99
GTPBP3-227ENST00000602056 GNEQ9Y223 722 aaKnown RBP27.46■■□□□ 1.99
GTPBP3-227ENST00000602056 LAMA2P24043 3122 aaKnown RBP27.46■■□□□ 1.99
GTPBP3-227ENST00000602056 ASB14A6NK59 587 aa27.45■■□□□ 1.98
GTPBP3-227ENST00000602056 ICAM1P05362 532 aa27.45■■□□□ 1.98
GTPBP3-227ENST00000602056 HAND2P61296 217 aa27.45■■□□□ 1.98
GTPBP3-227ENST00000602056 TNFAIP2Q03169 654 aa27.45■■□□□ 1.98
GTPBP3-227ENST00000602056 FPGSQ05932 587 aa27.45■■□□□ 1.98
GTPBP3-227ENST00000602056 TTYH1Q9H313 450 aaPredicted RBP27.45■■□□□ 1.98
GTPBP3-227ENST00000602056 PDGFCQ9NRA1 345 aa27.45■■□□□ 1.98
GTPBP3-227ENST00000602056 TCP11L1Q9NUJ3 509 aa27.45■■□□□ 1.98
GTPBP3-227ENST00000602056 ZMYM6O95789 1325 aa27.44■■□□□ 1.98
GTPBP3-227ENST00000602056 ARVCFO00192 962 aa27.44■■□□□ 1.98
GTPBP3-227ENST00000602056 TIMP1P01033 207 aa27.44■■□□□ 1.98
GTPBP3-227ENST00000602056 TOP1P11387 765 aaKnown RBP27.44■■□□□ 1.98
GTPBP3-227ENST00000602056 TMEM63BQ5T3F8 832 aa27.44■■□□□ 1.98
GTPBP3-227ENST00000602056 RNPC3Q96LT9 517 aaKnown RBP27.44■■□□□ 1.98
GTPBP3-227ENST00000602056 CDX2Q99626 313 aaPredicted RBP27.44■■□□□ 1.98
GTPBP3-227ENST00000602056 FRMPD2Q68DX3 1309 aaPredicted RBP27.43■■□□□ 1.98
GTPBP3-227ENST00000602056 A0A0U1RQG5 324 aaPredicted RBP27.43■■□□□ 1.98
GTPBP3-227ENST00000602056 SMPD1P17405 629 aa27.43■■□□□ 1.98
GTPBP3-227ENST00000602056 SYDE2Q5VT97 1194 aa27.43■■□□□ 1.98
GTPBP3-227ENST00000602056 TAPT1Q6NXT6 567 aa27.43■■□□□ 1.98
GTPBP3-227ENST00000602056 NSMFQ6X4W1 530 aa27.43■■□□□ 1.98
GTPBP3-227ENST00000602056 TBC1D10CQ8IV04 446 aa27.43■■□□□ 1.98
GTPBP3-227ENST00000602056 VTI1AQ96AJ9 217 aa27.43■■□□□ 1.98
GTPBP3-227ENST00000602056 CCDC171Q6TFL3 1326 aa27.42■■□□□ 1.98
GTPBP3-227ENST00000602056 MCM3APO60318 1980 aa27.42■■□□□ 1.98
GTPBP3-227ENST00000602056 TRIM6-TRIM34B2RNG4 842 aa27.42■■□□□ 1.98
GTPBP3-227ENST00000602056 IGHDP01880 384 aa27.42■■□□□ 1.98
GTPBP3-227ENST00000602056 B4GALNT3Q6L9W6 998 aa27.42■■□□□ 1.98
GTPBP3-227ENST00000602056 NOL8Q76FK4 1167 aaKnown RBP27.42■■□□□ 1.98
GTPBP3-227ENST00000602056 EEPD1Q7L9B9 569 aa27.42■■□□□ 1.98
GTPBP3-227ENST00000602056 FBXO16Q8IX29 292 aaPredicted RBP27.42■■□□□ 1.98
GTPBP3-227ENST00000602056 FAM126BQ8IXS8 530 aa27.42■■□□□ 1.98
GTPBP3-227ENST00000602056 MORC4Q8TE76 937 aa27.42■■□□□ 1.98
GTPBP3-227ENST00000602056 RILPL2Q969X0 211 aa27.42■■□□□ 1.98
GTPBP3-227ENST00000602056 GPCPD1Q9NPB8 672 aa27.42■■□□□ 1.98
GTPBP3-227ENST00000602056 PDHBP11177 359 aa27.41■■□□□ 1.98
GTPBP3-227ENST00000602056 CXCL17Q6UXB2 119 aa27.41■■□□□ 1.98
GTPBP3-227ENST00000602056 C16orf59Q7L2K0 433 aa27.41■■□□□ 1.98
GTPBP3-227ENST00000602056 TLK2Q86UE8 772 aa27.41■■□□□ 1.98
GTPBP3-227ENST00000602056 PLEKHM2Q8IWE5 1019 aa27.41■■□□□ 1.98
GTPBP3-227ENST00000602056 A0A0C4DFX4 3053 aa27.41■■□□□ 1.98
GTPBP3-227ENST00000602056 MROH7Q68CQ1 1323 aa27.41■■□□□ 1.98
GTPBP3-227ENST00000602056 NFIBO00712 420 aa27.4■■□□□ 1.98
GTPBP3-227ENST00000602056 SDSP20132 328 aa27.4■■□□□ 1.98
GTPBP3-227ENST00000602056 BAATQ14032 418 aaPredicted RBP27.4■■□□□ 1.98
GTPBP3-227ENST00000602056 AKNAD1Q5T1N1 836 aa27.4■■□□□ 1.98
GTPBP3-227ENST00000602056 MFSD5Q6N075 450 aa27.4■■□□□ 1.98
GTPBP3-227ENST00000602056 SLC43A3Q8NBI5 491 aa27.4■■□□□ 1.98
GTPBP3-227ENST00000602056 DYNC1LI2O43237 492 aaPredicted RBP27.39■■□□□ 1.98
GTPBP3-227ENST00000602056 CD4P01730 458 aa27.39■■□□□ 1.98
GTPBP3-227ENST00000602056 CLEC4DQ8WXI8 215 aa27.39■■□□□ 1.98
GTPBP3-227ENST00000602056 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.39■■□□□ 1.981e-7■■■■□ 22.2
GTPBP3-227ENST00000602056 GRIN2DO15399 1336 aa27.39■■□□□ 1.97
GTPBP3-227ENST00000602056 AAMPQ13685 434 aa27.38■■□□□ 1.97
GTPBP3-227ENST00000602056 FSCN1Q16658 493 aaKnown RBP27.38■■□□□ 1.97
GTPBP3-227ENST00000602056 IQSEC1Q6DN90 963 aa27.38■■□□□ 1.97
GTPBP3-227ENST00000602056 CHD1LQ86WJ1 897 aa27.38■■□□□ 1.97
GTPBP3-227ENST00000602056 RWDD1Q9H446 243 aaPredicted RBP27.38■■□□□ 1.97
GTPBP3-227ENST00000602056 OSBPL3Q9H4L5 887 aa27.38■■□□□ 1.97
GTPBP3-227ENST00000602056 SNHG28P0DPA3 235 aa27.37■■□□□ 1.97
GTPBP3-227ENST00000602056 NUCB1Q02818 461 aa27.37■■□□□ 1.97
GTPBP3-227ENST00000602056 ZNF543Q08ER8 600 aa27.37■■□□□ 1.97
GTPBP3-227ENST00000602056 MFSD6Q6ZSS7 791 aa27.37■■□□□ 1.97
GTPBP3-227ENST00000602056 VTA1Q9NP79 307 aa27.37■■□□□ 1.97
GTPBP3-227ENST00000602056 NEDD4P46934 1319 aa27.37■■□□□ 1.97
GTPBP3-227ENST00000602056 CSF2RAP15509 400 aa27.36■■□□□ 1.97
GTPBP3-227ENST00000602056 TMEM240Q5SV17 173 aa27.36■■□□□ 1.97
GTPBP3-227ENST00000602056 SLC30A10Q6XR72 485 aa27.36■■□□□ 1.97
GTPBP3-227ENST00000602056 MYLIPQ8WY64 445 aa27.36■■□□□ 1.97
GTPBP3-227ENST00000602056 YTHDC1Q96MU7 727 aaKnown RBP27.36■■□□□ 1.97
GTPBP3-227ENST00000602056 TTC14Q96N46 770 aa27.36■■□□□ 1.97
GTPBP3-227ENST00000602056 PPP1R12CQ9BZL4 782 aa27.36■■□□□ 1.97
GTPBP3-227ENST00000602056 AP5M1Q9H0R1 490 aa27.36■■□□□ 1.97
GTPBP3-227ENST00000602056 Q9Y3F1 56 aa27.36■■□□□ 1.97
GTPBP3-227ENST00000602056 PCP11498 1178 aaKnown RBP27.35■■□□□ 1.97
GTPBP3-227ENST00000602056 ALDH5A1P51649 535 aaPredicted RBP27.35■■□□□ 1.97
GTPBP3-227ENST00000602056 KIAA1211Q6ZU35 1233 aa27.35■■□□□ 1.97
GTPBP3-227ENST00000602056 EXOC6Q8TAG9 804 aa27.35■■□□□ 1.97
GTPBP3-227ENST00000602056 CUL9Q8IWT3 2517 aa27.34■■□□□ 1.97
GTPBP3-227ENST00000602056 LRRC37A2A6NM11 1700 aa27.34■■□□□ 1.97
GTPBP3-227ENST00000602056 CABYRO75952 493 aa27.34■■□□□ 1.97
GTPBP3-227ENST00000602056 PPIGQ13427 754 aaKnown RBP eCLIP27.34■■□□□ 1.977e-7■■■□□ 16.4
GTPBP3-227ENST00000602056 ITGA7Q13683 1181 aa27.34■■□□□ 1.97
GTPBP3-227ENST00000602056 RASIP1Q5U651 963 aa27.34■■□□□ 1.97
GTPBP3-227ENST00000602056 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.34■■□□□ 1.97
GTPBP3-227ENST00000602056 ZKSCAN3Q9BRR0 538 aa27.34■■□□□ 1.97
GTPBP3-227ENST00000602056 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.33■■□□□ 1.97
GTPBP3-227ENST00000602056 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.33■■□□□ 1.97
GTPBP3-227ENST00000602056 PTPDC1A2A3K4 754 aa27.33■■□□□ 1.97
GTPBP3-227ENST00000602056 TLR3O15455 904 aaKnown RBP27.33■■□□□ 1.97
GTPBP3-227ENST00000602056 ACRP10323 421 aa27.33■■□□□ 1.97
GTPBP3-227ENST00000602056 CYP2C18P33260 490 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms