RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 NT5C2P49902 561 aa21.06■□□□□ 0.96
SHKBP1-227ENST00000602011 AAMPQ13685 434 aa21.06■□□□□ 0.96
SHKBP1-227ENST00000602011 AGBL1Q96MI9 1066 aa21.06■□□□□ 0.96
SHKBP1-227ENST00000602011 RANBP6O60518 1105 aaKnown RBP21.05■□□□□ 0.96
SHKBP1-227ENST00000602011 ALAS1P13196 640 aa21.05■□□□□ 0.96
SHKBP1-227ENST00000602011 CNTN2Q02246 1040 aa21.05■□□□□ 0.96
SHKBP1-227ENST00000602011 ANKRD45Q5TZF3 282 aa21.05■□□□□ 0.96
SHKBP1-227ENST00000602011 NOL8Q76FK4 1167 aaKnown RBP21.05■□□□□ 0.96
SHKBP1-227ENST00000602011 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.05■□□□□ 0.96
SHKBP1-227ENST00000602011 PRDM6Q9NQX0 595 aa21.05■□□□□ 0.96
SHKBP1-227ENST00000602011 IL17RBQ9NRM6 502 aa21.05■□□□□ 0.96
SHKBP1-227ENST00000602011 TCP11L1Q9NUJ3 509 aa21.05■□□□□ 0.96
SHKBP1-227ENST00000602011 ADD3Q9UEY8 706 aaKnown RBP21.05■□□□□ 0.96
SHKBP1-227ENST00000602011 PRR12Q9ULL5 1215 aa21.05■□□□□ 0.96
SHKBP1-227ENST00000602011 GNEQ9Y223 722 aaKnown RBP21.05■□□□□ 0.96
SHKBP1-227ENST00000602011 SALL3Q9BXA9 1300 aa21.04■□□□□ 0.96
SHKBP1-227ENST00000602011 SOWAHBA6NEL2 793 aa21.04■□□□□ 0.96
SHKBP1-227ENST00000602011 GRXCR1A8MXD5 290 aa21.04■□□□□ 0.96
SHKBP1-227ENST00000602011 ICAM1P05362 532 aa21.04■□□□□ 0.96
SHKBP1-227ENST00000602011 PSRC1Q6PGN9 363 aaPredicted RBP21.04■□□□□ 0.96
SHKBP1-227ENST00000602011 BTNL9Q6UXG8 535 aa21.04■□□□□ 0.96
SHKBP1-227ENST00000602011 FAM126BQ8IXS8 530 aa21.04■□□□□ 0.96
SHKBP1-227ENST00000602011 SLC43A3Q8NBI5 491 aa21.04■□□□□ 0.96
SHKBP1-227ENST00000602011 OTUD7AQ8TE49 926 aaPredicted RBP21.04■□□□□ 0.96
SHKBP1-227ENST00000602011 TTC14Q96N46 770 aa21.04■□□□□ 0.96
SHKBP1-227ENST00000602011 MTIF3Q9H2K0 278 aaKnown RBP21.04■□□□□ 0.96
SHKBP1-227ENST00000602011 VTA1Q9NP79 307 aa21.04■□□□□ 0.96
SHKBP1-227ENST00000602011 CYP39A1Q9NYL5 469 aa21.04■□□□□ 0.96
SHKBP1-227ENST00000602011 MCM3APO60318 1980 aa21.03■□□□□ 0.96
SHKBP1-227ENST00000602011 PBX2P40425 430 aa21.03■□□□□ 0.96
SHKBP1-227ENST00000602011 MCMDC2Q4G0Z9 681 aa21.03■□□□□ 0.96
SHKBP1-227ENST00000602011 KCTD1Q719H9 257 aa21.03■□□□□ 0.96
SHKBP1-227ENST00000602011 C16orf59Q7L2K0 433 aa21.03■□□□□ 0.96
SHKBP1-227ENST00000602011 MORC4Q8TE76 937 aa21.03■□□□□ 0.96
SHKBP1-227ENST00000602011 MPHOSPH6Q99547 160 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-227ENST00000602011 CCPG1Q9ULG6 757 aa21.03■□□□□ 0.96
SHKBP1-227ENST00000602011 MYH4Q9Y623 1939 aa21.03■□□□□ 0.96
SHKBP1-227ENST00000602011 CTAGE5O15320 804 aa21.02■□□□□ 0.96
SHKBP1-227ENST00000602011 CD4P01730 458 aa21.02■□□□□ 0.96
SHKBP1-227ENST00000602011 ACRP10323 421 aa21.02■□□□□ 0.96
SHKBP1-227ENST00000602011 TOP1P11387 765 aaKnown RBP21.02■□□□□ 0.96
SHKBP1-227ENST00000602011 CTDSPL2Q05D32 466 aa21.02■□□□□ 0.96
SHKBP1-227ENST00000602011 HDAC1Q13547 482 aaPredicted RBP21.02■□□□□ 0.96
SHKBP1-227ENST00000602011 FSCN1Q16658 493 aaKnown RBP21.02■□□□□ 0.96
SHKBP1-227ENST00000602011 PPM1EQ8WY54 764 aa21.02■□□□□ 0.96
SHKBP1-227ENST00000602011 CHMP4CQ96CF2 233 aa21.02■□□□□ 0.96
SHKBP1-227ENST00000602011 MAF1Q9H063 256 aa21.02■□□□□ 0.96
SHKBP1-227ENST00000602011 ZNF576Q9H609 170 aa21.02■□□□□ 0.96
SHKBP1-227ENST00000602011 FOXP2O15409 715 aa21.01■□□□□ 0.95
SHKBP1-227ENST00000602011 PDE1AP54750 535 aa21.01■□□□□ 0.95
SHKBP1-227ENST00000602011 MFAP1P55081 439 aaKnown RBP21.01■□□□□ 0.95
SHKBP1-227ENST00000602011 RASIP1Q5U651 963 aa21.01■□□□□ 0.95
SHKBP1-227ENST00000602011 TLK2Q86UE8 772 aa21.01■□□□□ 0.95
SHKBP1-227ENST00000602011 TIFAQ96CG3 184 aa21.01■□□□□ 0.95
SHKBP1-227ENST00000602011 PPP1R12CQ9BZL4 782 aa21.01■□□□□ 0.95
SHKBP1-227ENST00000602011 RANBP17Q9H2T7 1088 aaKnown RBP21.01■□□□□ 0.95
SHKBP1-227ENST00000602011 ZMYM6O95789 1325 aa21.01■□□□□ 0.95
SHKBP1-227ENST00000602011 B4DLN1 442 aa21■□□□□ 0.95
SHKBP1-227ENST00000602011 DYNC1LI2O43237 492 aaPredicted RBP21■□□□□ 0.95
SHKBP1-227ENST00000602011 FGAP02671 866 aa21■□□□□ 0.95
SHKBP1-227ENST00000602011 CSF2RAP15509 400 aa21■□□□□ 0.95
SHKBP1-227ENST00000602011 PTGS1P23219 599 aa21■□□□□ 0.95
SHKBP1-227ENST00000602011 MRPL12P52815 198 aaKnown RBP21■□□□□ 0.95
SHKBP1-227ENST00000602011 ITGA7Q13683 1181 aa21■□□□□ 0.95
SHKBP1-227ENST00000602011 CCDC96Q2M329 555 aa21■□□□□ 0.95
SHKBP1-227ENST00000602011 TMEM240Q5SV17 173 aa21■□□□□ 0.95
SHKBP1-227ENST00000602011 SYMPKQ92797 1274 aaKnown RBP21■□□□□ 0.95
SHKBP1-227ENST00000602011 DDX49Q9Y6V7 483 aaKnown RBP21■□□□□ 0.95
SHKBP1-227ENST00000602011 RRP1P56182 461 aaKnown RBP20.99■□□□□ 0.95
SHKBP1-227ENST00000602011 SYDE2Q5VT97 1194 aa20.99■□□□□ 0.95
SHKBP1-227ENST00000602011 TAPT1Q6NXT6 567 aa20.99■□□□□ 0.95
SHKBP1-227ENST00000602011 NSMFQ6X4W1 530 aa20.99■□□□□ 0.95
SHKBP1-227ENST00000602011 RPUSD2Q8IZ73 545 aaKnown RBP20.99■□□□□ 0.95
SHKBP1-227ENST00000602011 PBX4Q9BYU1 374 aa20.99■□□□□ 0.95
SHKBP1-227ENST00000602011 RNF41Q9H4P4 317 aaPredicted RBP20.99■□□□□ 0.95
SHKBP1-227ENST00000602011 IL23AQ9NPF7 189 aa20.99■□□□□ 0.95
SHKBP1-227ENST00000602011 TOMM22Q9NS69 142 aa20.99■□□□□ 0.95
SHKBP1-227ENST00000602011 MYO9BQ13459 2157 aa20.99■□□□□ 0.95
SHKBP1-227ENST00000602011 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.98■□□□□ 0.95
SHKBP1-227ENST00000602011 NMT2O60551 498 aa20.98■□□□□ 0.95
SHKBP1-227ENST00000602011 SUPT20HL2P0C7V6 817 aa20.98■□□□□ 0.95
SHKBP1-227ENST00000602011 SMPD1P17405 629 aa20.98■□□□□ 0.95
SHKBP1-227ENST00000602011 BEX3Q00994 111 aa20.98■□□□□ 0.95
SHKBP1-227ENST00000602011 DUSP28Q4G0W2 176 aa20.98■□□□□ 0.95
SHKBP1-227ENST00000602011 BRDTQ58F21 947 aaPredicted RBP20.98■□□□□ 0.95
SHKBP1-227ENST00000602011 CCDC178Q5BJE1 867 aa20.98■□□□□ 0.95
SHKBP1-227ENST00000602011 MUM1L1Q5H9M0 696 aa20.98■□□□□ 0.95
SHKBP1-227ENST00000602011 VPS53Q5VIR6 699 aa20.98■□□□□ 0.95
SHKBP1-227ENST00000602011 CXCL17Q6UXB2 119 aa20.98■□□□□ 0.95
SHKBP1-227ENST00000602011 KIAA1211Q6ZU35 1233 aa20.98■□□□□ 0.95
SHKBP1-227ENST00000602011 TMEM47Q9BQJ4 181 aa20.98■□□□□ 0.95
SHKBP1-227ENST00000602011 PRDM12Q9H4Q4 367 aa20.98■□□□□ 0.95
SHKBP1-227ENST00000602011 POLR3EQ9NVU0 708 aa20.98■□□□□ 0.95
SHKBP1-227ENST00000602011 FGBP02675 491 aa20.97■□□□□ 0.95
SHKBP1-227ENST00000602011 HSPD1P10809 573 aaKnown RBP20.97■□□□□ 0.95
SHKBP1-227ENST00000602011 CYP2C18P33260 490 aa20.97■□□□□ 0.95
SHKBP1-227ENST00000602011 RAB30Q15771 203 aa20.97■□□□□ 0.95
SHKBP1-227ENST00000602011 MFSD6Q6ZSS7 791 aa20.97■□□□□ 0.95
SHKBP1-227ENST00000602011 ZNF365Q70YC5 407 aa20.97■□□□□ 0.95
SHKBP1-227ENST00000602011 HERVK_113Q902F9 699 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms