RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 PQBP1O60828 265 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-226ENST00000600791 C6orf222P0C671 652 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-226ENST00000600791 KCNA10Q16322 511 aa17.69■□□□□ 0.42
SHKBP1-226ENST00000600791 NUP133Q8WUM0 1156 aa17.69■□□□□ 0.42
SHKBP1-226ENST00000600791 ESR2Q92731 530 aa17.69■□□□□ 0.42
SHKBP1-226ENST00000600791 BADQ92934 168 aa17.69■□□□□ 0.42
SHKBP1-226ENST00000600791 TTC14Q96N46 770 aa17.69■□□□□ 0.42
SHKBP1-226ENST00000600791 UPF3AQ9H1J1 476 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-226ENST00000600791 STARD7Q9NQZ5 370 aa17.69■□□□□ 0.42
SHKBP1-226ENST00000600791 DDX49Q9Y6V7 483 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-226ENST00000600791 CLTBP09497 229 aa17.68■□□□□ 0.42
SHKBP1-226ENST00000600791 SNHG28P0DPA3 235 aa17.68■□□□□ 0.42
SHKBP1-226ENST00000600791 GJA9P57773 515 aa17.68■□□□□ 0.42
SHKBP1-226ENST00000600791 ZNF543Q08ER8 600 aa17.68■□□□□ 0.42
SHKBP1-226ENST00000600791 NSMFQ6X4W1 530 aa17.68■□□□□ 0.42
SHKBP1-226ENST00000600791 Q7L0L9 218 aa17.68■□□□□ 0.42
SHKBP1-226ENST00000600791 DEFB123Q8N688 67 aa17.68■□□□□ 0.42
SHKBP1-226ENST00000600791 ZKSCAN3Q9BRR0 538 aa17.68■□□□□ 0.42
SHKBP1-226ENST00000600791 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-226ENST00000600791 NFIBO00712 420 aa17.67■□□□□ 0.42
SHKBP1-226ENST00000600791 ASGR1P07306 291 aa17.67■□□□□ 0.42
SHKBP1-226ENST00000600791 ITGB8P26012 769 aa17.67■□□□□ 0.42
SHKBP1-226ENST00000600791 PDE4AP27815 886 aa17.67■□□□□ 0.42
SHKBP1-226ENST00000600791 ANKRD33Q7Z3H0 272 aa17.67■□□□□ 0.42
SHKBP1-226ENST00000600791 PCSK9Q8NBP7 692 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-226ENST00000600791 PURBQ96QR8 312 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-226ENST00000600791 DSCC1Q9BVC3 393 aa17.67■□□□□ 0.42
SHKBP1-226ENST00000600791 SPC25Q9HBM1 224 aa17.67■□□□□ 0.42
SHKBP1-226ENST00000600791 CTAGE5O15320 804 aa17.66■□□□□ 0.42
SHKBP1-226ENST00000600791 KDM4AO75164 1064 aa17.66■□□□□ 0.42
SHKBP1-226ENST00000600791 NT5C2P49902 561 aa17.66■□□□□ 0.42
SHKBP1-226ENST00000600791 TNFAIP2Q03169 654 aa17.66■□□□□ 0.42
SHKBP1-226ENST00000600791 SHHQ15465 462 aa17.66■□□□□ 0.42
SHKBP1-226ENST00000600791 C9orf50Q5SZB4 431 aa17.66■□□□□ 0.42
SHKBP1-226ENST00000600791 GLT1D1Q96MS3 346 aa17.66■□□□□ 0.42
SHKBP1-226ENST00000600791 TOX2Q96NM4 488 aa17.66■□□□□ 0.42
SHKBP1-226ENST00000600791 IL25Q9H293 177 aa17.66■□□□□ 0.42
SHKBP1-226ENST00000600791 ELP1O95163 1332 aa17.66■□□□□ 0.42
SHKBP1-226ENST00000600791 KIAA0355O15063 1070 aa17.65■□□□□ 0.42
SHKBP1-226ENST00000600791 GSPT1P15170 499 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-226ENST00000600791 NKX3-2P78367 333 aa17.65■□□□□ 0.42
SHKBP1-226ENST00000600791 FAAP100Q0VG06 881 aa17.65■□□□□ 0.42
SHKBP1-226ENST00000600791 BAATQ14032 418 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-226ENST00000600791 GNASQ5JWF2 1037 aa17.65■□□□□ 0.42
SHKBP1-226ENST00000600791 EEPD1Q7L9B9 569 aa17.65■□□□□ 0.42
SHKBP1-226ENST00000600791 IQCA1Q86XH1 822 aa17.65■□□□□ 0.42
SHKBP1-226ENST00000600791 DGKHQ86XP1 1220 aa17.65■□□□□ 0.42
SHKBP1-226ENST00000600791 FBXO16Q8IX29 292 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-226ENST00000600791 GNEQ9Y223 722 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-226ENST00000600791 CDH23Q9H251 3354 aa17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 B4E1Z4 1266 aa17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 GOLGA8HP0CJ92 632 aa17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 PTGS1P23219 599 aa17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 BEX3Q00994 111 aa17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 IMMTQ16891 758 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 GPATCH4Q5T3I0 446 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 TTC22Q5TAA0 569 aa17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 SLC30A10Q6XR72 485 aa17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 NOL8Q76FK4 1167 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 TLK2Q86UE8 772 aa17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 PNMA1Q8ND90 353 aa17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 MORC4Q8TE76 937 aa17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 CLEC4DQ8WXI8 215 aa17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 PDGFCQ9NRA1 345 aa17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 TMEM39AQ9NV64 488 aa17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 WDR19Q8NEZ3 1342 aa17.64■□□□□ 0.41
SHKBP1-226ENST00000600791 A0A0U1RQG5 324 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 PTPDC1A2A3K4 754 aa17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 DCDC2CA8MYV0 355 aa17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 RAG1P15918 1043 aa17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 SMPD1P17405 629 aa17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 CDK7P50613 346 aa17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 ALDH5A1P51649 535 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 IRX6P78412 446 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 CCDC178Q5BJE1 867 aa17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 TAPT1Q6NXT6 567 aa17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 ZSCAN10Q96SZ4 725 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 CPVLQ9H3G5 476 aa17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 KAT14Q9H8E8 782 aa17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 VTA1Q9NP79 307 aa17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 MTMR10Q9NXD2 777 aa17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 ADD3Q9UEY8 706 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 CTNNA3Q9UI47 895 aa17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 PNMA2Q9UL42 364 aa17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 MROH7Q68CQ1 1323 aa17.63■□□□□ 0.41
SHKBP1-226ENST00000600791 CALML3P27482 149 aa17.62■□□□□ 0.41
SHKBP1-226ENST00000600791 EPHB4P54760 987 aa17.62■□□□□ 0.41
SHKBP1-226ENST00000600791 TMEM63BQ5T3F8 832 aa17.62■□□□□ 0.41
SHKBP1-226ENST00000600791 RNF207Q6ZRF8 634 aa17.62■□□□□ 0.41
SHKBP1-226ENST00000600791 ENAHQ8N8S7 591 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-226ENST00000600791 ANKS1AQ92625 1134 aa17.62■□□□□ 0.41
SHKBP1-226ENST00000600791 UBA5Q9GZZ9 404 aa17.62■□□□□ 0.41
SHKBP1-226ENST00000600791 ZSWIM5Q9P217 1185 aa17.62■□□□□ 0.41
SHKBP1-226ENST00000600791 TBX21Q9UL17 535 aa17.62■□□□□ 0.41
SHKBP1-226ENST00000600791 TNKSO95271 1327 aa17.62■□□□□ 0.41
SHKBP1-226ENST00000600791 ARVCFO00192 962 aa17.61■□□□□ 0.41
SHKBP1-226ENST00000600791 FSCN1Q16658 493 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-226ENST00000600791 IQSEC1Q6DN90 963 aa17.61■□□□□ 0.41
SHKBP1-226ENST00000600791 CXCL17Q6UXB2 119 aa17.61■□□□□ 0.41
SHKBP1-226ENST00000600791 VTI1AQ96AJ9 217 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms