RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 USP25Q9UHP3 1055 aa22.78■■□□□ 1.24
PNKP-214ENST00000600573 SCAF8Q9UPN6 1271 aaKnown RBP22.78■■□□□ 1.24
PNKP-214ENST00000600573 ADAMTS3O15072 1205 aa22.77■■□□□ 1.24
PNKP-214ENST00000600573 FOSP01100 380 aaPredicted RBP22.77■■□□□ 1.24
PNKP-214ENST00000600573 FDX1P10109 184 aa22.77■■□□□ 1.24
PNKP-214ENST00000600573 JAKMIP3Q5VZ66 844 aa22.77■■□□□ 1.24
PNKP-214ENST00000600573 SULF1Q8IWU6 871 aa22.77■■□□□ 1.24
PNKP-214ENST00000600573 TBCKQ8TEA7 893 aa22.77■■□□□ 1.24
PNKP-214ENST00000600573 KLRG1Q96E93 195 aa22.77■■□□□ 1.24
PNKP-214ENST00000600573 CSRNP2Q9H175 543 aa22.77■■□□□ 1.24
PNKP-214ENST00000600573 RANBP17Q9H2T7 1088 aaKnown RBP22.77■■□□□ 1.24
PNKP-214ENST00000600573 ZRSR1Q15695 479 aaKnown RBP22.76■■□□□ 1.23
PNKP-214ENST00000600573 DTHD1Q6ZMT9 781 aa22.76■■□□□ 1.23
PNKP-214ENST00000600573 WRNIP1Q96S55 665 aa22.76■■□□□ 1.23
PNKP-214ENST00000600573 DNAJC25Q9H1X3 360 aa22.76■■□□□ 1.23
PNKP-214ENST00000600573 C19orf81C9J6K1 198 aa22.75■■□□□ 1.23
PNKP-214ENST00000600573 INPP5BP32019 993 aa22.75■■□□□ 1.23
PNKP-214ENST00000600573 HS1BP3Q53T59 392 aa22.75■■□□□ 1.23
PNKP-214ENST00000600573 KIAA1755Q5JYT7 1200 aa22.75■■□□□ 1.23
PNKP-214ENST00000600573 KIAA1468Q9P260 1216 aa22.75■■□□□ 1.23
PNKP-214ENST00000600573 GLTPD2A6NH11 291 aa22.75■■□□□ 1.23
PNKP-214ENST00000600573 GCFC2P16383 781 aaKnown RBP22.75■■□□□ 1.23
PNKP-214ENST00000600573 ZNF165P49910 485 aa22.75■■□□□ 1.23
PNKP-214ENST00000600573 PPP4R3AQ6IN85 833 aa22.75■■□□□ 1.23
PNKP-214ENST00000600573 PRPF38AQ8NAV1 312 aaKnown RBP22.75■■□□□ 1.23
PNKP-214ENST00000600573 ZNF280CQ8ND82 737 aa22.75■■□□□ 1.23
PNKP-214ENST00000600573 IQCA1LA6NCM1 817 aa22.74■■□□□ 1.23
PNKP-214ENST00000600573 WNT7AO00755 349 aa22.74■■□□□ 1.23
PNKP-214ENST00000600573 CCNT1O60563 726 aaKnown RBP22.74■■□□□ 1.23
PNKP-214ENST00000600573 PTPRAP18433 802 aa22.74■■□□□ 1.23
PNKP-214ENST00000600573 USP11P51784 963 aa22.74■■□□□ 1.23
PNKP-214ENST00000600573 LETM2Q2VYF4 491 aa22.74■■□□□ 1.23
PNKP-214ENST00000600573 KRBA2Q6ZNG9 492 aa22.74■■□□□ 1.23
PNKP-214ENST00000600573 CEP57L1Q8IYX8 460 aa22.74■■□□□ 1.23
PNKP-214ENST00000600573 CNNM3Q8NE01 707 aa22.74■■□□□ 1.23
PNKP-214ENST00000600573 AK8Q96MA6 479 aa22.74■■□□□ 1.23
PNKP-214ENST00000600573 PIK3CDO00329 1044 aa22.73■■□□□ 1.23
PNKP-214ENST00000600573 PPP1R12BO60237 982 aaPredicted RBP22.73■■□□□ 1.23
PNKP-214ENST00000600573 TXLNAP40222 546 aa22.73■■□□□ 1.23
PNKP-214ENST00000600573 BACE1P56817 501 aa22.73■■□□□ 1.23
PNKP-214ENST00000600573 FAM43AQ8N2R8 423 aa22.73■■□□□ 1.23
PNKP-214ENST00000600573 GLIS2Q9BZE0 524 aaPredicted RBP22.73■■□□□ 1.23
PNKP-214ENST00000600573 MRPL11Q9Y3B7 192 aaKnown RBP22.73■■□□□ 1.23
PNKP-214ENST00000600573 VWA3AA6NCI4 1184 aa22.72■■□□□ 1.23
PNKP-214ENST00000600573 NEMFO60524 1076 aa22.72■■□□□ 1.23
PNKP-214ENST00000600573 GRIN1Q05586 938 aa22.72■■□□□ 1.23
PNKP-214ENST00000600573 ZYXQ15942 572 aaKnown RBP22.72■■□□□ 1.23
PNKP-214ENST00000600573 MOXD1Q6UVY6 613 aa22.72■■□□□ 1.23
PNKP-214ENST00000600573 LUZP1Q86V48 1076 aa22.72■■□□□ 1.23
PNKP-214ENST00000600573 KIFC2Q96AC6 838 aa22.72■■□□□ 1.23
PNKP-214ENST00000600573 C12orf42Q96LP6 360 aa22.72■■□□□ 1.23
PNKP-214ENST00000600573 NAT10Q9H0A0 1025 aaKnown RBP22.72■■□□□ 1.23
PNKP-214ENST00000600573 TMEM260Q9NX78 707 aa22.72■■□□□ 1.23
PNKP-214ENST00000600573 ABCB11O95342 1321 aa22.72■■□□□ 1.23
PNKP-214ENST00000600573 ADCY5O95622 1261 aa22.71■■□□□ 1.23
PNKP-214ENST00000600573 OR52Z1P0C646 297 aa22.71■■□□□ 1.23
PNKP-214ENST00000600573 C11orf57Q6ZUT1 292 aaPredicted RBP22.71■■□□□ 1.23
PNKP-214ENST00000600573 SAMD3Q8N6K7 520 aa22.71■■□□□ 1.23
PNKP-214ENST00000600573 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.71■■□□□ 1.233e-6■■■■■ 38.3
PNKP-214ENST00000600573 SLF1Q9BQI6 1058 aa22.71■■□□□ 1.23
PNKP-214ENST00000600573 CCDC39Q9UFE4 941 aa22.71■■□□□ 1.23
PNKP-214ENST00000600573 POLR2DO15514 142 aaKnown RBP22.71■■□□□ 1.23
PNKP-214ENST00000600573 EPHX2P34913 555 aa22.71■■□□□ 1.23
PNKP-214ENST00000600573 NF2P35240 595 aa22.71■■□□□ 1.23
PNKP-214ENST00000600573 MAP3K9P80192 1104 aa22.71■■□□□ 1.23
PNKP-214ENST00000600573 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.71■■□□□ 1.23
PNKP-214ENST00000600573 ATAD5Q96QE3 1844 aa22.7■■□□□ 1.22
PNKP-214ENST00000600573 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.7■■□□□ 1.22
PNKP-214ENST00000600573 MEIS2O14770 477 aa22.7■■□□□ 1.22
PNKP-214ENST00000600573 USP2O75604 605 aaPredicted RBP22.7■■□□□ 1.22
PNKP-214ENST00000600573 SPP2Q13103 211 aa22.7■■□□□ 1.22
PNKP-214ENST00000600573 LONRF3Q496Y0 759 aa22.7■■□□□ 1.22
PNKP-214ENST00000600573 PRAMEF18Q5VWM3 479 aa22.7■■□□□ 1.22
PNKP-214ENST00000600573 PNMA8AQ86V59 439 aaPredicted RBP22.7■■□□□ 1.22
PNKP-214ENST00000600573 IQUBQ8NA54 791 aa22.7■■□□□ 1.22
PNKP-214ENST00000600573 RBM46Q8TBY0 533 aaKnown RBP22.7■■□□□ 1.22
PNKP-214ENST00000600573 SYMPKQ92797 1274 aaKnown RBP22.7■■□□□ 1.22
PNKP-214ENST00000600573 ZKSCAN4Q969J2 545 aaPredicted RBP22.7■■□□□ 1.22
PNKP-214ENST00000600573 SPDYE3A6NKU9 549 aa22.69■■□□□ 1.22
PNKP-214ENST00000600573 NLRP12P59046 1061 aa22.69■■□□□ 1.22
PNKP-214ENST00000600573 MTMR2Q13614 643 aa22.69■■□□□ 1.22
PNKP-214ENST00000600573 UBE2SQ16763 222 aa22.69■■□□□ 1.22
PNKP-214ENST00000600573 SPECC1Q5M775 1068 aa22.69■■□□□ 1.22
PNKP-214ENST00000600573 RAB34Q9BZG1 259 aa22.69■■□□□ 1.22
PNKP-214ENST00000600573 EMILIN3Q9NT22 766 aa22.69■■□□□ 1.22
PNKP-214ENST00000600573 TUBE1Q9UJT0 475 aa22.69■■□□□ 1.22
PNKP-214ENST00000600573 ZHX2Q9Y6X8 837 aa22.69■■□□□ 1.22
PNKP-214ENST00000600573 GOLGA6L19H0YKK7 550 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 ICAM1P05362 532 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 SLFN14P0C7P3 912 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 IREB2P48200 963 aaKnown RBP22.68■■□□□ 1.22
PNKP-214ENST00000600573 IQCB1Q15051 598 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 USH1GQ495M9 461 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 KRT26Q7Z3Y9 468 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 CCDC84Q86UT8 332 aaPredicted RBP22.68■■□□□ 1.22
PNKP-214ENST00000600573 ERCC4Q92889 916 aaPredicted RBP22.68■■□□□ 1.22
PNKP-214ENST00000600573 ANO3Q9BYT9 981 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 CCSER1Q9C0I3 900 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 EHMT1Q9H9B1 1298 aa22.68■■□□□ 1.22
PNKP-214ENST00000600573 MAP3K20Q9NYL2 800 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms