RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 COA1Q9GZY4 146 aa12.55□□□□□ -0.4
SMG9-207ENST00000598860 ECHDC1Q9NTX5 307 aa12.55□□□□□ -0.4
SMG9-207ENST00000598860 STAP2Q9UGK3 403 aa12.55□□□□□ -0.4
SMG9-207ENST00000598860 PASKQ96RG2 1323 aa12.55□□□□□ -0.4
SMG9-207ENST00000598860 SHTN1A0MZ66 631 aa12.54□□□□□ -0.4
SMG9-207ENST00000598860 SORBS3O60504 671 aa12.54□□□□□ -0.4
SMG9-207ENST00000598860 UQCRFS1P1P0C7P4 283 aa12.54□□□□□ -0.4
SMG9-207ENST00000598860 PDE1AP54750 535 aa12.54□□□□□ -0.4
SMG9-207ENST00000598860 TIMM10P62072 90 aa12.54□□□□□ -0.4
SMG9-207ENST00000598860 XKR5Q6UX68 686 aa12.54□□□□□ -0.4
SMG9-207ENST00000598860 C1orf229Q6ZS94 237 aaPredicted RBP12.54□□□□□ -0.4
SMG9-207ENST00000598860 KRT25Q7Z3Z0 450 aa12.54□□□□□ -0.4
SMG9-207ENST00000598860 TXNRD3Q86VQ6 643 aa12.54□□□□□ -0.4
SMG9-207ENST00000598860 AGBL3Q8NEM8 1001 aa12.54□□□□□ -0.4
SMG9-207ENST00000598860 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMG9-207ENST00000598860 ZNF512BQ96KM6 892 aaPredicted RBP12.54□□□□□ -0.4
SMG9-207ENST00000598860 DBNDD2Q9BQY9 259 aa12.54□□□□□ -0.4
SMG9-207ENST00000598860 CCDC8Q9H0W5 538 aaPredicted RBP12.54□□□□□ -0.4
SMG9-207ENST00000598860 GNL3LQ9NVN8 582 aaKnown RBP12.54□□□□□ -0.4
SMG9-207ENST00000598860 PGAP2Q9UHJ9 254 aa12.54□□□□□ -0.4
SMG9-207ENST00000598860 FOXD3Q9UJU5 478 aaPredicted RBP12.54□□□□□ -0.4
SMG9-207ENST00000598860 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.54□□□□□ -0.4
SMG9-207ENST00000598860 SCN9AQ15858 1988 aa12.54□□□□□ -0.4
SMG9-207ENST00000598860 MAST2Q6P0Q8 1798 aa12.53□□□□□ -0.4
SMG9-207ENST00000598860 ADAMTSL1Q8N6G6 1762 aa12.53□□□□□ -0.4
SMG9-207ENST00000598860 CPNE3O75131 537 aaKnown RBP12.53□□□□□ -0.4
SMG9-207ENST00000598860 TNFRSF21O75509 655 aa12.53□□□□□ -0.4
SMG9-207ENST00000598860 GLRX3O76003 335 aaKnown RBP12.53□□□□□ -0.4
SMG9-207ENST00000598860 MAP3K10Q02779 954 aa12.53□□□□□ -0.4
SMG9-207ENST00000598860 TBC1D10BQ4KMP7 808 aaPredicted RBP12.53□□□□□ -0.4
SMG9-207ENST00000598860 PDE12Q6L8Q7 609 aaKnown RBP12.53□□□□□ -0.4
SMG9-207ENST00000598860 ZNF438Q7Z4V0 828 aa12.53□□□□□ -0.4
SMG9-207ENST00000598860 ZNF804AQ7Z570 1209 aa12.53□□□□□ -0.4
SMG9-207ENST00000598860 GALNT6Q8NCL4 622 aa12.53□□□□□ -0.4
SMG9-207ENST00000598860 TRPM4Q8TD43 1214 aa12.53□□□□□ -0.4
SMG9-207ENST00000598860 IRS2Q9Y4H2 1338 aa12.53□□□□□ -0.4
SMG9-207ENST00000598860 SNAP23O00161 211 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 OIP5O43482 229 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 XYLBO75191 536 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 SASH3O75995 380 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 ATP5JP18859 108 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 NFKB1P19838 968 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 KLRK1P26718 216 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 GNA15P30679 374 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 RGS3P49796 1198 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 TTC39AQ5SRH9 613 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 LDLRAD1Q5T700 205 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 STRIP1Q5VSL9 837 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 TTLL5Q6EMB2 1281 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 SLCO4C1Q6ZQN7 724 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 FCHSD1Q86WN1 690 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 VPS37DQ86XT2 251 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 SNX29Q8TEQ0 813 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 C11orf16Q9NQ32 467 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 TLR7Q9NYK1 1049 aaKnown RBP12.52□□□□□ -0.41
SMG9-207ENST00000598860 VTI1BQ9UEU0 232 aa12.52□□□□□ -0.41
SMG9-207ENST00000598860 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.52□□□□□ -0.41
SMG9-207ENST00000598860 ZNF646O15015 1829 aaPredicted RBP12.52□□□□□ -0.41
SMG9-207ENST00000598860 SIN3BO75182 1162 aa12.51□□□□□ -0.41
SMG9-207ENST00000598860 TARSP26639 723 aaKnown RBP12.51□□□□□ -0.41
SMG9-207ENST00000598860 ADORA1P30542 326 aa12.51□□□□□ -0.41
SMG9-207ENST00000598860 HIBADHP31937 336 aaKnown RBP12.51□□□□□ -0.41
SMG9-207ENST00000598860 ZNF280AP59817 542 aaPredicted RBP12.51□□□□□ -0.41
SMG9-207ENST00000598860 CDC37L1Q7L3B6 337 aa12.51□□□□□ -0.41
SMG9-207ENST00000598860 OTUD7AQ8TE49 926 aaPredicted RBP12.51□□□□□ -0.41
SMG9-207ENST00000598860 EDARADDQ8WWZ3 215 aa12.51□□□□□ -0.41
SMG9-207ENST00000598860 GMLQ99445 158 aa12.51□□□□□ -0.41
SMG9-207ENST00000598860 EFCC1Q9HA90 598 aa12.51□□□□□ -0.41
SMG9-207ENST00000598860 CD209Q9NNX6 404 aa12.51□□□□□ -0.41
SMG9-207ENST00000598860 PDS5AQ29RF7 1337 aaKnown RBP12.51□□□□□ -0.41
SMG9-207ENST00000598860 CEP350Q5VT06 3117 aa12.5□□□□□ -0.41
SMG9-207ENST00000598860 TRAF5O00463 557 aa12.5□□□□□ -0.41
SMG9-207ENST00000598860 EGFRP00533 1210 aa12.5□□□□□ -0.41
SMG9-207ENST00000598860 PHKA1P46020 1223 aa12.5□□□□□ -0.41
SMG9-207ENST00000598860 KIF4BQ2VIQ3 1234 aa12.5□□□□□ -0.41
SMG9-207ENST00000598860 DACT2Q5SW24 774 aa12.5□□□□□ -0.41
SMG9-207ENST00000598860 TTC22Q5TAA0 569 aa12.5□□□□□ -0.41
SMG9-207ENST00000598860 JMYQ8N9B5 988 aa12.5□□□□□ -0.41
SMG9-207ENST00000598860 PI4K2BQ8TCG2 481 aa12.5□□□□□ -0.41
SMG9-207ENST00000598860 DCPSQ96C86 337 aaKnown RBP12.5□□□□□ -0.41
SMG9-207ENST00000598860 FAM84BQ96KN1 310 aaPredicted RBP12.5□□□□□ -0.41
SMG9-207ENST00000598860 ELP3Q9H9T3 547 aa12.5□□□□□ -0.41
SMG9-207ENST00000598860 TMEM63CQ9P1W3 806 aa12.5□□□□□ -0.41
SMG9-207ENST00000598860 POLR2AP24928 1970 aaKnown RBP12.49□□□□□ -0.41
SMG9-207ENST00000598860 MYH2Q9UKX2 1941 aa12.49□□□□□ -0.41
SMG9-207ENST00000598860 MYO3BQ8WXR4 1341 aa12.49□□□□□ -0.41
SMG9-207ENST00000598860 SCAMP3O14828 347 aaKnown RBP12.49□□□□□ -0.41
SMG9-207ENST00000598860 IGSF3O75054 1194 aa12.49□□□□□ -0.41
SMG9-207ENST00000598860 GYG1P46976 350 aa12.49□□□□□ -0.41
SMG9-207ENST00000598860 MMP14P50281 582 aa12.49□□□□□ -0.41
SMG9-207ENST00000598860 BMP2KLQ5H9B9 411 aa12.49□□□□□ -0.41
SMG9-207ENST00000598860 USP48Q86UV5 1035 aa12.49□□□□□ -0.41
SMG9-207ENST00000598860 HAUS7Q99871 368 aa12.49□□□□□ -0.41
SMG9-207ENST00000598860 MXD3Q9BW11 206 aa12.49□□□□□ -0.41
SMG9-207ENST00000598860 GLIS2Q9BZE0 524 aaPredicted RBP12.49□□□□□ -0.41
SMG9-207ENST00000598860 IGFLR1Q9H665 355 aa12.49□□□□□ -0.41
SMG9-207ENST00000598860 ZFATQ9P243 1243 aa12.49□□□□□ -0.41
SMG9-207ENST00000598860 DENND2AQ9ULE3 1009 aa12.49□□□□□ -0.41
SMG9-207ENST00000598860 RFX7Q2KHR2 1363 aa12.48□□□□□ -0.41
SMG9-207ENST00000598860 ARHGEF15O94989 841 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms