RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 CTDP1Q9Y5B0 961 aaPredicted RBP13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 UMODL1Q5DID0 1318 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 MYH4Q9Y623 1939 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 A0A0D9SFI3 127 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 RBAK-RBAKDNI3L0D1 243 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 ACRP10323 421 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 CYP2C18P33260 490 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 SLC16A2P36021 539 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 PBX2P40425 430 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 TNFAIP2Q03169 654 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 ALX1Q15699 326 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 ANKRD45Q5TZF3 282 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 CXCL17Q6UXB2 119 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 EEPD1Q7L9B9 569 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 FAM160B2Q86V87 743 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 USP38Q8NB14 1042 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 CHURC1Q8WUH1 139 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 GLT1D1Q96MS3 346 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 CYP39A1Q9NYL5 469 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 STX8Q9UNK0 236 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 MTMR7Q9Y216 660 aa13.08□□□□□ -0.32
GRAMD1A-209ENST00000598580 TSPY2A6NKD2 308 aa13.07□□□□□ -0.32
GRAMD1A-209ENST00000598580 ORC4O43929 436 aa13.07□□□□□ -0.32
GRAMD1A-209ENST00000598580 RANBP6O60518 1105 aaKnown RBP13.07□□□□□ -0.32
GRAMD1A-209ENST00000598580 FGAP02671 866 aa13.07□□□□□ -0.32
GRAMD1A-209ENST00000598580 PDE1AP54750 535 aa13.07□□□□□ -0.32
GRAMD1A-209ENST00000598580 ZNF365Q70YC5 407 aa13.07□□□□□ -0.32
GRAMD1A-209ENST00000598580 ZNF589Q86UQ0 364 aaPredicted RBP13.07□□□□□ -0.32
GRAMD1A-209ENST00000598580 FBXO16Q8IX29 292 aaPredicted RBP13.07□□□□□ -0.32
GRAMD1A-209ENST00000598580 PCSK9Q8NBP7 692 aaKnown RBP13.07□□□□□ -0.32
GRAMD1A-209ENST00000598580 MORC4Q8TE76 937 aa13.07□□□□□ -0.32
GRAMD1A-209ENST00000598580 VTI1AQ96AJ9 217 aa13.07□□□□□ -0.32
GRAMD1A-209ENST00000598580 PPP1R12CQ9BZL4 782 aa13.07□□□□□ -0.32
GRAMD1A-209ENST00000598580 ISY1Q9ULR0 285 aaKnown RBP13.07□□□□□ -0.32
GRAMD1A-209ENST00000598580 A0A0U1RQG5 324 aaPredicted RBP13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 DYNC1LI2O43237 492 aaPredicted RBP13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 SLC3A2P08195 630 aaKnown RBP13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 FDX1P10109 184 aa13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 DNAJB2P25686 324 aa13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 RRP1P56182 461 aaKnown RBP13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 PSMC6P62333 389 aa13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 IKQ13123 557 aaPredicted RBP13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 BAATQ14032 418 aaPredicted RBP13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 LRRFIP1Q32MZ4 808 aaKnown RBP13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 TKFCQ3LXA3 575 aa13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 BTNL9Q6UXG8 535 aa13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 CLEC4DQ8WXI8 215 aa13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 TMEM47Q9BQJ4 181 aa13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 TRPV6Q9H1D0 765 aa13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 PRDM6Q9NQX0 595 aa13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 CXXC1Q9P0U4 656 aaPredicted RBP13.06□□□□□ -0.32
GRAMD1A-209ENST00000598580 ASB14A6NK59 587 aa13.05□□□□□ -0.32
GRAMD1A-209ENST00000598580 NFIBO00712 420 aa13.05□□□□□ -0.32
GRAMD1A-209ENST00000598580 ICAM1P05362 532 aa13.05□□□□□ -0.32
GRAMD1A-209ENST00000598580 FOSL2P15408 326 aa13.05□□□□□ -0.32
GRAMD1A-209ENST00000598580 FSCN1Q16658 493 aaKnown RBP13.05□□□□□ -0.32
GRAMD1A-209ENST00000598580 NSMFQ6X4W1 530 aa13.05□□□□□ -0.32
GRAMD1A-209ENST00000598580 TLK2Q86UE8 772 aa13.05□□□□□ -0.32
GRAMD1A-209ENST00000598580 EVI5LQ96CN4 794 aa13.05□□□□□ -0.32
GRAMD1A-209ENST00000598580 PBX4Q9BYU1 374 aa13.05□□□□□ -0.32
GRAMD1A-209ENST00000598580 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
GRAMD1A-209ENST00000598580 ZNF576Q9H609 170 aa13.05□□□□□ -0.32
GRAMD1A-209ENST00000598580 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
GRAMD1A-209ENST00000598580 HELLSQ9NRZ9 838 aa13.05□□□□□ -0.32
GRAMD1A-209ENST00000598580 CHD7Q9P2D1 2997 aa13.05□□□□□ -0.32
GRAMD1A-209ENST00000598580 FRMPD2Q68DX3 1309 aaPredicted RBP13.05□□□□□ -0.32
GRAMD1A-209ENST00000598580 HSPD1P10809 573 aaKnown RBP13.04□□□□□ -0.32
GRAMD1A-209ENST00000598580 HAND2P61296 217 aa13.04□□□□□ -0.32
GRAMD1A-209ENST00000598580 NMIQ13287 307 aaPredicted RBP13.04□□□□□ -0.32
GRAMD1A-209ENST00000598580 ITGA7Q13683 1181 aa13.04□□□□□ -0.32
GRAMD1A-209ENST00000598580 IQSEC1Q6DN90 963 aa13.04□□□□□ -0.32
GRAMD1A-209ENST00000598580 NOL8Q76FK4 1167 aaKnown RBP13.04□□□□□ -0.32
GRAMD1A-209ENST00000598580 TBC1D10CQ8IV04 446 aa13.04□□□□□ -0.32
GRAMD1A-209ENST00000598580 PPP1R13LQ8WUF5 828 aa13.04□□□□□ -0.32
GRAMD1A-209ENST00000598580 WNT8AQ9H1J5 351 aa13.04□□□□□ -0.32
GRAMD1A-209ENST00000598580 SPC25Q9HBM1 224 aa13.04□□□□□ -0.32
GRAMD1A-209ENST00000598580 CCPG1Q9ULG6 757 aa13.04□□□□□ -0.32
GRAMD1A-209ENST00000598580 LCTP09848 1927 aa13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 TMEM265A0A087WTH1 108 aa13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 B4GALT4O60513 344 aa13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 PPIGQ13427 754 aaKnown RBP eCLIP13.03□□□□□ -0.322e-7■■□□□ 13.8
GRAMD1A-209ENST00000598580 HDAC1Q13547 482 aaPredicted RBP13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 ADGRE1Q14246 886 aa13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 CCDC96Q2M329 555 aa13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 MCMDC2Q4G0Z9 681 aa13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 RRP12Q5JTH9 1297 aaKnown RBP13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 SYDE2Q5VT97 1194 aa13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 SLC30A10Q6XR72 485 aa13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 DCAF4Q8WV16 495 aa13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 TIFAQ96CG3 184 aa13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 NOC4LQ9BVI4 516 aaKnown RBP13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 CPVLQ9H3G5 476 aa13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 IL23AQ9NPF7 189 aa13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 TCP11L1Q9NUJ3 509 aa13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 MYO9BQ13459 2157 aa13.03□□□□□ -0.32
GRAMD1A-209ENST00000598580 RBM47A0AV96 593 aaKnown RBP13.02□□□□□ -0.33
GRAMD1A-209ENST00000598580 SNHG28P0DPA3 235 aa13.02□□□□□ -0.33
GRAMD1A-209ENST00000598580 PDHBP11177 359 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms