RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 YTHDC1Q96MU7 727 aaKnown RBP22.31■■□□□ 1.16
SNRPA-204ENST00000598452 CCPG1Q9ULG6 757 aa22.31■■□□□ 1.16
SNRPA-204ENST00000598452 BEX3Q00994 111 aa22.3■■□□□ 1.16
SNRPA-204ENST00000598452 TNFAIP2Q03169 654 aa22.3■■□□□ 1.16
SNRPA-204ENST00000598452 NSMFQ6X4W1 530 aa22.3■■□□□ 1.16
SNRPA-204ENST00000598452 DCAF4Q8WV16 495 aa22.3■■□□□ 1.16
SNRPA-204ENST00000598452 RILPL2Q969X0 211 aa22.3■■□□□ 1.16
SNRPA-204ENST00000598452 RNPC3Q96LT9 517 aaKnown RBP22.3■■□□□ 1.16
SNRPA-204ENST00000598452 TMEM47Q9BQJ4 181 aa22.3■■□□□ 1.16
SNRPA-204ENST00000598452 ELP1O95163 1332 aa22.3■■□□□ 1.16
SNRPA-204ENST00000598452 FRMPD2Q68DX3 1309 aaPredicted RBP22.3■■□□□ 1.16
SNRPA-204ENST00000598452 ASB14A6NK59 587 aa22.29■■□□□ 1.16
SNRPA-204ENST00000598452 CDK7P50613 346 aa22.29■■□□□ 1.16
SNRPA-204ENST00000598452 FPGSQ05932 587 aa22.29■■□□□ 1.16
SNRPA-204ENST00000598452 EEPD1Q7L9B9 569 aa22.29■■□□□ 1.16
SNRPA-204ENST00000598452 GPCPD1Q9NPB8 672 aa22.29■■□□□ 1.16
SNRPA-204ENST00000598452 PDGFCQ9NRA1 345 aa22.29■■□□□ 1.16
SNRPA-204ENST00000598452 CYP39A1Q9NYL5 469 aa22.29■■□□□ 1.16
SNRPA-204ENST00000598452 TBX21Q9UL17 535 aa22.29■■□□□ 1.16
SNRPA-204ENST00000598452 ICAM1P05362 532 aa22.28■■□□□ 1.16
SNRPA-204ENST00000598452 TOP1P11387 765 aaKnown RBP22.28■■□□□ 1.16
SNRPA-204ENST00000598452 SMAD3P84022 425 aaKnown RBP22.28■■□□□ 1.16
SNRPA-204ENST00000598452 TMEM63BQ5T3F8 832 aa22.28■■□□□ 1.16
SNRPA-204ENST00000598452 RANBP17Q9H2T7 1088 aaKnown RBP22.28■■□□□ 1.16
SNRPA-204ENST00000598452 SEMA6BQ9H3T3 888 aa22.28■■□□□ 1.16
SNRPA-204ENST00000598452 CCDC171Q6TFL3 1326 aa22.28■■□□□ 1.16
SNRPA-204ENST00000598452 A0A0U1RQG5 324 aaPredicted RBP22.27■■□□□ 1.16
SNRPA-204ENST00000598452 ARVCFO00192 962 aa22.27■■□□□ 1.16
SNRPA-204ENST00000598452 TIMP1P01033 207 aa22.27■■□□□ 1.16
SNRPA-204ENST00000598452 SMPD1P17405 629 aa22.27■■□□□ 1.16
SNRPA-204ENST00000598452 SYDE2Q5VT97 1194 aa22.27■■□□□ 1.16
SNRPA-204ENST00000598452 BTNL9Q6UXG8 535 aa22.27■■□□□ 1.16
SNRPA-204ENST00000598452 TBC1D10CQ8IV04 446 aa22.27■■□□□ 1.16
SNRPA-204ENST00000598452 FBXO16Q8IX29 292 aaPredicted RBP22.27■■□□□ 1.16
SNRPA-204ENST00000598452 SMC5Q8IY18 1101 aa22.27■■□□□ 1.16
SNRPA-204ENST00000598452 CDX2Q99626 313 aaPredicted RBP22.27■■□□□ 1.16
SNRPA-204ENST00000598452 TCP11L1Q9NUJ3 509 aa22.27■■□□□ 1.16
SNRPA-204ENST00000598452 GNEQ9Y223 722 aaKnown RBP22.27■■□□□ 1.16
SNRPA-204ENST00000598452 IGHDP01880 384 aa22.26■■□□□ 1.15
SNRPA-204ENST00000598452 NKX3-2P78367 333 aa22.26■■□□□ 1.15
SNRPA-204ENST00000598452 BAATQ14032 418 aaPredicted RBP22.26■■□□□ 1.15
SNRPA-204ENST00000598452 TAPT1Q6NXT6 567 aa22.26■■□□□ 1.15
SNRPA-204ENST00000598452 CXCL17Q6UXB2 119 aa22.26■■□□□ 1.15
SNRPA-204ENST00000598452 TLK2Q86UE8 772 aa22.26■■□□□ 1.15
SNRPA-204ENST00000598452 TTYH1Q9H313 450 aaPredicted RBP22.26■■□□□ 1.15
SNRPA-204ENST00000598452 ZMYM6O95789 1325 aa22.26■■□□□ 1.15
SNRPA-204ENST00000598452 MROH7Q68CQ1 1323 aa22.26■■□□□ 1.15
SNRPA-204ENST00000598452 NFIBO00712 420 aa22.25■■□□□ 1.15
SNRPA-204ENST00000598452 DYNC1LI2O43237 492 aaPredicted RBP22.25■■□□□ 1.15
SNRPA-204ENST00000598452 SDSP20132 328 aa22.25■■□□□ 1.15
SNRPA-204ENST00000598452 AKNAD1Q5T1N1 836 aa22.25■■□□□ 1.15
SNRPA-204ENST00000598452 MFSD6Q6ZSS7 791 aa22.25■■□□□ 1.15
SNRPA-204ENST00000598452 PLEKHM2Q8IWE5 1019 aa22.25■■□□□ 1.15
SNRPA-204ENST00000598452 FAM126BQ8IXS8 530 aa22.25■■□□□ 1.15
SNRPA-204ENST00000598452 RWDD1Q9H446 243 aaPredicted RBP22.25■■□□□ 1.15
SNRPA-204ENST00000598452 PDHBP11177 359 aa22.24■■□□□ 1.15
SNRPA-204ENST00000598452 FSCN1Q16658 493 aaKnown RBP22.24■■□□□ 1.15
SNRPA-204ENST00000598452 MFSD5Q6N075 450 aa22.24■■□□□ 1.15
SNRPA-204ENST00000598452 CHD1LQ86WJ1 897 aa22.24■■□□□ 1.15
SNRPA-204ENST00000598452 PPP1R12CQ9BZL4 782 aa22.24■■□□□ 1.15
SNRPA-204ENST00000598452 A0A0C4DFX4 3053 aa22.23■■□□□ 1.15
SNRPA-204ENST00000598452 MFAP1P55081 439 aaKnown RBP22.23■■□□□ 1.15
SNRPA-204ENST00000598452 C16orf59Q7L2K0 433 aa22.23■■□□□ 1.15
SNRPA-204ENST00000598452 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.23■■□□□ 1.152e-10■■□□□ 11.6
SNRPA-204ENST00000598452 ZKSCAN3Q9BRR0 538 aa22.23■■□□□ 1.15
SNRPA-204ENST00000598452 AP5M1Q9H0R1 490 aa22.23■■□□□ 1.15
SNRPA-204ENST00000598452 NEDD4P46934 1319 aa22.23■■□□□ 1.15
SNRPA-204ENST00000598452 PTPDC1A2A3K4 754 aa22.22■■□□□ 1.15
SNRPA-204ENST00000598452 CSF2RAP15509 400 aa22.22■■□□□ 1.15
SNRPA-204ENST00000598452 ZNF543Q08ER8 600 aa22.22■■□□□ 1.15
SNRPA-204ENST00000598452 IQSEC1Q6DN90 963 aa22.22■■□□□ 1.15
SNRPA-204ENST00000598452 KIAA1211Q6ZU35 1233 aa22.22■■□□□ 1.15
SNRPA-204ENST00000598452 EXOC6Q8TAG9 804 aa22.22■■□□□ 1.15
SNRPA-204ENST00000598452 MORC4Q8TE76 937 aa22.22■■□□□ 1.15
SNRPA-204ENST00000598452 MYLIPQ8WY64 445 aa22.22■■□□□ 1.15
SNRPA-204ENST00000598452 TLR3O15455 904 aaKnown RBP22.21■■□□□ 1.15
SNRPA-204ENST00000598452 ALDH5A1P51649 535 aaPredicted RBP22.21■■□□□ 1.15
SNRPA-204ENST00000598452 NUCB1Q02818 461 aa22.21■■□□□ 1.15
SNRPA-204ENST00000598452 CWC27Q6UX04 472 aaKnown RBP22.21■■□□□ 1.15
SNRPA-204ENST00000598452 SLC30A10Q6XR72 485 aa22.21■■□□□ 1.15
SNRPA-204ENST00000598452 SLC43A3Q8NBI5 491 aa22.21■■□□□ 1.15
SNRPA-204ENST00000598452 CLEC4DQ8WXI8 215 aa22.21■■□□□ 1.15
SNRPA-204ENST00000598452 TTC14Q96N46 770 aa22.21■■□□□ 1.15
SNRPA-204ENST00000598452 VTA1Q9NP79 307 aa22.21■■□□□ 1.15
SNRPA-204ENST00000598452 GRIN2DO15399 1336 aa22.21■■□□□ 1.15
SNRPA-204ENST00000598452 LRRC37A2A6NM11 1700 aa22.2■■□□□ 1.14
SNRPA-204ENST00000598452 CD4P01730 458 aa22.2■■□□□ 1.14
SNRPA-204ENST00000598452 GOLGA8HP0CJ92 632 aa22.2■■□□□ 1.14
SNRPA-204ENST00000598452 SNHG28P0DPA3 235 aa22.2■■□□□ 1.14
SNRPA-204ENST00000598452 ACRP10323 421 aa22.2■■□□□ 1.14
SNRPA-204ENST00000598452 PCP11498 1178 aaKnown RBP22.2■■□□□ 1.14
SNRPA-204ENST00000598452 CALML3P27482 149 aa22.2■■□□□ 1.14
SNRPA-204ENST00000598452 CYP2C18P33260 490 aa22.2■■□□□ 1.14
SNRPA-204ENST00000598452 PSMC6P62333 389 aa22.2■■□□□ 1.14
SNRPA-204ENST00000598452 PPIGQ13427 754 aaKnown RBP eCLIP22.2■■□□□ 1.147e-9■□□□□ 9.6
SNRPA-204ENST00000598452 ITGA7Q13683 1181 aa22.2■■□□□ 1.14
SNRPA-204ENST00000598452 TMEM240Q5SV17 173 aa22.2■■□□□ 1.14
SNRPA-204ENST00000598452 CPVLQ9H3G5 476 aa22.2■■□□□ 1.14
SNRPA-204ENST00000598452 OSBPL3Q9H4L5 887 aa22.2■■□□□ 1.14
SNRPA-204ENST00000598452 RNF41Q9H4P4 317 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms