RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 DCDC2CA8MYV0 355 aa14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 SLC16A2P36021 539 aa14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 HAND2P61296 217 aa14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 SMAD3P84022 425 aaKnown RBP14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 RRP12Q5JTH9 1297 aaKnown RBP14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 GNASQ5JWF2 1037 aa14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 RCSD1Q6JBY9 416 aa14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 EEPD1Q7L9B9 569 aa14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 FBXO16Q8IX29 292 aaPredicted RBP14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 EVI5LQ96CN4 794 aa14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 TOX2Q96NM4 488 aa14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 PPP1R12CQ9BZL4 782 aa14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 PDGFCQ9NRA1 345 aa14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 TOMM22Q9NS69 142 aa14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 ANAPC4Q9UJX5 808 aa14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 FRMPD2Q68DX3 1309 aaPredicted RBP14.32□□□□□ -0.12
SOX2-OT-228ENST00000597828 ORC4O43929 436 aa14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 FDX1P10109 184 aa14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 CDK7P50613 346 aa14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 TNFAIP2Q03169 654 aa14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 NMIQ13287 307 aaPredicted RBP14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 NSMFQ6X4W1 530 aa14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 FAM126BQ8IXS8 530 aa14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 PCSK9Q8NBP7 692 aaKnown RBP14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 VTI1AQ96AJ9 217 aa14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 LNPKQ9C0E8 428 aa14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 CYP39A1Q9NYL5 469 aa14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 CCPG1Q9ULG6 757 aa14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 ELP1O95163 1332 aa14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 TCF20Q9UGU0 1960 aaKnown RBP14.31□□□□□ -0.12
SOX2-OT-228ENST00000597828 COL4A4P53420 1690 aaPredicted RBP14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 A0A0U1RQG5 324 aaPredicted RBP14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 ARVCFO00192 962 aa14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 PLA2G6O60733 806 aa14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 TIMP1P01033 207 aa14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 FGAP02671 866 aa14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 SMPD1P17405 629 aa14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 NOVP48745 357 aa14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 TKFCQ3LXA3 575 aa14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 CXCL17Q6UXB2 119 aa14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 NOL8Q76FK4 1167 aaKnown RBP14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 TLK2Q86UE8 772 aa14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 COL25A1Q9BXS0 654 aaPredicted RBP14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 RANBP17Q9H2T7 1088 aaKnown RBP14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 SPC25Q9HBM1 224 aa14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 GPCPD1Q9NPB8 672 aa14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 HELLSQ9NRZ9 838 aa14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 ZBTB47Q9UFB7 747 aaPredicted RBP14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 GNEQ9Y223 722 aaKnown RBP14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 MROH7Q68CQ1 1323 aa14.3□□□□□ -0.12
SOX2-OT-228ENST00000597828 NFIBO00712 420 aa14.29□□□□□ -0.12
SOX2-OT-228ENST00000597828 FGRP09769 529 aa14.29□□□□□ -0.12
SOX2-OT-228ENST00000597828 ACRP10323 421 aa14.29□□□□□ -0.12
SOX2-OT-228ENST00000597828 HSPD1P10809 573 aaKnown RBP14.29□□□□□ -0.12
SOX2-OT-228ENST00000597828 CSF2RAP15509 400 aa14.29□□□□□ -0.12
SOX2-OT-228ENST00000597828 HDAC1Q13547 482 aaPredicted RBP14.29□□□□□ -0.12
SOX2-OT-228ENST00000597828 ALX1Q15699 326 aa14.29□□□□□ -0.12
SOX2-OT-228ENST00000597828 TAPT1Q6NXT6 567 aa14.29□□□□□ -0.12
SOX2-OT-228ENST00000597828 C16orf59Q7L2K0 433 aa14.29□□□□□ -0.12
SOX2-OT-228ENST00000597828 TBC1D10CQ8IV04 446 aa14.29□□□□□ -0.12
SOX2-OT-228ENST00000597828 MAFAQ8NHW3 353 aaPredicted RBP14.29□□□□□ -0.12
SOX2-OT-228ENST00000597828 DCAF4Q8WV16 495 aa14.29□□□□□ -0.12
SOX2-OT-228ENST00000597828 TMEM47Q9BQJ4 181 aa14.29□□□□□ -0.12
SOX2-OT-228ENST00000597828 UMODL1Q5DID0 1318 aa14.29□□□□□ -0.12
SOX2-OT-228ENST00000597828 ASB14A6NK59 587 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 GRXCR1A8MXD5 290 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 GRIN2DO15399 1336 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 REV3LO60673 3130 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 ICAM1P05362 532 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 DNAJB2P25686 324 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 CYP2C18P33260 490 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 NEDD4P46934 1319 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 PSMC6P62333 389 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 NKX3-2P78367 333 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 MCMDC2Q4G0Z9 681 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 PPP4R3BQ5MIZ7 849 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 TMEM240Q5SV17 173 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 SYDE2Q5VT97 1194 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 MFSD5Q6N075 450 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 CCDC171Q6TFL3 1326 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 SLC30A10Q6XR72 485 aa14.28□□□□□ -0.12
SOX2-OT-228ENST00000597828 ZMYM6O95789 1325 aa14.27□□□□□ -0.12
SOX2-OT-228ENST00000597828 TRIM6-TRIM34B2RNG4 842 aa14.27□□□□□ -0.13
SOX2-OT-228ENST00000597828 DYNC1LI2O43237 492 aaPredicted RBP14.27□□□□□ -0.13
SOX2-OT-228ENST00000597828 CD4P01730 458 aa14.27□□□□□ -0.13
SOX2-OT-228ENST00000597828 PDHBP11177 359 aa14.27□□□□□ -0.13
SOX2-OT-228ENST00000597828 TOP1P11387 765 aaKnown RBP14.27□□□□□ -0.13
SOX2-OT-228ENST00000597828 FOSL2P15408 326 aa14.27□□□□□ -0.13
SOX2-OT-228ENST00000597828 PBX2P40425 430 aa14.27□□□□□ -0.13
SOX2-OT-228ENST00000597828 ALDH5A1P51649 535 aaPredicted RBP14.27□□□□□ -0.13
SOX2-OT-228ENST00000597828 BAATQ14032 418 aaPredicted RBP14.27□□□□□ -0.13
SOX2-OT-228ENST00000597828 FSCN1Q16658 493 aaKnown RBP14.27□□□□□ -0.13
SOX2-OT-228ENST00000597828 B4GALNT3Q6L9W6 998 aa14.27□□□□□ -0.13
SOX2-OT-228ENST00000597828 BTNL9Q6UXG8 535 aa14.27□□□□□ -0.13
SOX2-OT-228ENST00000597828 RILPL2Q969X0 211 aa14.27□□□□□ -0.13
SOX2-OT-228ENST00000597828 YTHDC1Q96MU7 727 aaKnown RBP14.27□□□□□ -0.13
SOX2-OT-228ENST00000597828 ZKSCAN3Q9BRR0 538 aa14.27□□□□□ -0.13
SOX2-OT-228ENST00000597828 SPTBN5Q9NRC6 3674 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms