RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 RRP12Q5JTH9 1297 aaKnown RBP19.03■□□□□ 0.64
LIM2-202ENST00000596399 C16orf59Q7L2K0 433 aa19.03■□□□□ 0.64
LIM2-202ENST00000596399 PCSK9Q8NBP7 692 aaKnown RBP19.03■□□□□ 0.64
LIM2-202ENST00000596399 SPC25Q9HBM1 224 aa19.03■□□□□ 0.64
LIM2-202ENST00000596399 TOMM22Q9NS69 142 aa19.03■□□□□ 0.64
LIM2-202ENST00000596399 CYP39A1Q9NYL5 469 aa19.03■□□□□ 0.64
LIM2-202ENST00000596399 ARVCFO00192 962 aa19.02■□□□□ 0.64
LIM2-202ENST00000596399 PLA2G6O60733 806 aa19.02■□□□□ 0.64
LIM2-202ENST00000596399 SMPD1P17405 629 aa19.02■□□□□ 0.64
LIM2-202ENST00000596399 NOVP48745 357 aa19.02■□□□□ 0.64
LIM2-202ENST00000596399 NSMFQ6X4W1 530 aa19.02■□□□□ 0.64
LIM2-202ENST00000596399 ZNF589Q86UQ0 364 aaPredicted RBP19.02■□□□□ 0.64
LIM2-202ENST00000596399 FBXO16Q8IX29 292 aaPredicted RBP19.02■□□□□ 0.64
LIM2-202ENST00000596399 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.02■□□□□ 0.64
LIM2-202ENST00000596399 COL25A1Q9BXS0 654 aaPredicted RBP19.02■□□□□ 0.64
LIM2-202ENST00000596399 PPP1R12CQ9BZL4 782 aa19.02■□□□□ 0.64
LIM2-202ENST00000596399 HELLSQ9NRZ9 838 aa19.02■□□□□ 0.64
LIM2-202ENST00000596399 ZBTB47Q9UFB7 747 aaPredicted RBP19.02■□□□□ 0.64
LIM2-202ENST00000596399 FRMPD2Q68DX3 1309 aaPredicted RBP19.01■□□□□ 0.63
LIM2-202ENST00000596399 LRRC37A2A6NM11 1700 aa19.01■□□□□ 0.63
LIM2-202ENST00000596399 A0A0U1RQG5 324 aaPredicted RBP19.01■□□□□ 0.63
LIM2-202ENST00000596399 ORC4O43929 436 aa19.01■□□□□ 0.63
LIM2-202ENST00000596399 FGRP09769 529 aa19.01■□□□□ 0.63
LIM2-202ENST00000596399 ACRP10323 421 aa19.01■□□□□ 0.63
LIM2-202ENST00000596399 CSF2RAP15509 400 aa19.01■□□□□ 0.63
LIM2-202ENST00000596399 HAND2P61296 217 aa19.01■□□□□ 0.63
LIM2-202ENST00000596399 NMIQ13287 307 aaPredicted RBP19.01■□□□□ 0.63
LIM2-202ENST00000596399 ALX1Q15699 326 aa19.01■□□□□ 0.63
LIM2-202ENST00000596399 TKFCQ3LXA3 575 aa19.01■□□□□ 0.63
LIM2-202ENST00000596399 MFSD5Q6N075 450 aa19.01■□□□□ 0.63
LIM2-202ENST00000596399 CXCL17Q6UXB2 119 aa19.01■□□□□ 0.63
LIM2-202ENST00000596399 FAM126BQ8IXS8 530 aa19.01■□□□□ 0.63
LIM2-202ENST00000596399 TMEM47Q9BQJ4 181 aa19.01■□□□□ 0.63
LIM2-202ENST00000596399 GPCPD1Q9NPB8 672 aa19.01■□□□□ 0.63
LIM2-202ENST00000596399 CCPG1Q9ULG6 757 aa19.01■□□□□ 0.63
LIM2-202ENST00000596399 GNEQ9Y223 722 aaKnown RBP19.01■□□□□ 0.63
LIM2-202ENST00000596399 LCTP09848 1927 aa19.01■□□□□ 0.63
LIM2-202ENST00000596399 ASB14A6NK59 587 aa19■□□□□ 0.63
LIM2-202ENST00000596399 DYNC1LI2O43237 492 aaPredicted RBP19■□□□□ 0.63
LIM2-202ENST00000596399 HSPD1P10809 573 aaKnown RBP19■□□□□ 0.63
LIM2-202ENST00000596399 MCMDC2Q4G0Z9 681 aa19■□□□□ 0.63
LIM2-202ENST00000596399 TAPT1Q6NXT6 567 aa19■□□□□ 0.63
LIM2-202ENST00000596399 TLK2Q86UE8 772 aa19■□□□□ 0.63
LIM2-202ENST00000596399 MAFAQ8NHW3 353 aaPredicted RBP19■□□□□ 0.63
LIM2-202ENST00000596399 GRIN2DO15399 1336 aa19■□□□□ 0.63
LIM2-202ENST00000596399 GRXCR1A8MXD5 290 aa18.99■□□□□ 0.63
LIM2-202ENST00000596399 NFIBO00712 420 aa18.99■□□□□ 0.63
LIM2-202ENST00000596399 ICAM1P05362 532 aa18.99■□□□□ 0.63
LIM2-202ENST00000596399 CYP2C18P33260 490 aa18.99■□□□□ 0.63
LIM2-202ENST00000596399 NKX3-2P78367 333 aa18.99■□□□□ 0.63
LIM2-202ENST00000596399 HDAC1Q13547 482 aaPredicted RBP18.99■□□□□ 0.63
LIM2-202ENST00000596399 BAATQ14032 418 aaPredicted RBP18.99■□□□□ 0.63
LIM2-202ENST00000596399 PPP4R3BQ5MIZ7 849 aa18.99■□□□□ 0.63
LIM2-202ENST00000596399 TMEM240Q5SV17 173 aa18.99■□□□□ 0.63
LIM2-202ENST00000596399 DCAF4Q8WV16 495 aa18.99■□□□□ 0.63
LIM2-202ENST00000596399 LNPKQ9C0E8 428 aa18.99■□□□□ 0.63
LIM2-202ENST00000596399 RANBP17Q9H2T7 1088 aaKnown RBP18.99■□□□□ 0.63
LIM2-202ENST00000596399 UMODL1Q5DID0 1318 aa18.99■□□□□ 0.63
LIM2-202ENST00000596399 MROH7Q68CQ1 1323 aa18.99■□□□□ 0.63
LIM2-202ENST00000596399 SPTBN5Q9NRC6 3674 aaKnown RBP18.98■□□□□ 0.63
LIM2-202ENST00000596399 CD4P01730 458 aa18.98■□□□□ 0.63
LIM2-202ENST00000596399 DNAJB2P25686 324 aa18.98■□□□□ 0.63
LIM2-202ENST00000596399 PBX2P40425 430 aa18.98■□□□□ 0.63
LIM2-202ENST00000596399 PSMC6P62333 389 aa18.98■□□□□ 0.63
LIM2-202ENST00000596399 GRIN2CQ14957 1233 aa18.98■□□□□ 0.63
LIM2-202ENST00000596399 FSCN1Q16658 493 aaKnown RBP18.98■□□□□ 0.63
LIM2-202ENST00000596399 SYDE2Q5VT97 1194 aa18.98■□□□□ 0.63
LIM2-202ENST00000596399 B4GALNT3Q6L9W6 998 aa18.98■□□□□ 0.63
LIM2-202ENST00000596399 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.97■□□□□ 0.63
LIM2-202ENST00000596399 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.97■□□□□ 0.63
LIM2-202ENST00000596399 TRIM6-TRIM34B2RNG4 842 aa18.97■□□□□ 0.63
LIM2-202ENST00000596399 TOP1P11387 765 aaKnown RBP18.97■□□□□ 0.63
LIM2-202ENST00000596399 FOSL2P15408 326 aa18.97■□□□□ 0.63
LIM2-202ENST00000596399 BTNL9Q6UXG8 535 aa18.97■□□□□ 0.63
LIM2-202ENST00000596399 ZNF365Q70YC5 407 aa18.97■□□□□ 0.63
LIM2-202ENST00000596399 SLC43A3Q8NBI5 491 aa18.97■□□□□ 0.63
LIM2-202ENST00000596399 RILPL2Q969X0 211 aa18.97■□□□□ 0.63
LIM2-202ENST00000596399 AP5M1Q9H0R1 490 aa18.97■□□□□ 0.63
LIM2-202ENST00000596399 TRPV6Q9H1D0 765 aa18.97■□□□□ 0.63
LIM2-202ENST00000596399 CHD9Q3L8U1 2897 aa18.97■□□□□ 0.63
LIM2-202ENST00000596399 PPIGQ13427 754 aaKnown RBP eCLIP18.96■□□□□ 0.63
LIM2-202ENST00000596399 ITGA7Q13683 1181 aa18.96■□□□□ 0.63
LIM2-202ENST00000596399 SLC30A10Q6XR72 485 aa18.96■□□□□ 0.63
LIM2-202ENST00000596399 KIAA1211Q6ZU35 1233 aa18.96■□□□□ 0.63
LIM2-202ENST00000596399 TBC1D10CQ8IV04 446 aa18.96■□□□□ 0.63
LIM2-202ENST00000596399 PTPDC1A2A3K4 754 aa18.95■□□□□ 0.62
LIM2-202ENST00000596399 TLR3O15455 904 aaKnown RBP18.95■□□□□ 0.62
LIM2-202ENST00000596399 PDHBP11177 359 aa18.95■□□□□ 0.62
LIM2-202ENST00000596399 IQSEC1Q6DN90 963 aa18.95■□□□□ 0.62
LIM2-202ENST00000596399 TMEM199Q8N511 208 aa18.95■□□□□ 0.62
LIM2-202ENST00000596399 MORC4Q8TE76 937 aa18.95■□□□□ 0.62
LIM2-202ENST00000596399 CLEC4DQ8WXI8 215 aa18.95■□□□□ 0.62
LIM2-202ENST00000596399 ZKSCAN3Q9BRR0 538 aa18.95■□□□□ 0.62
LIM2-202ENST00000596399 CPVLQ9H3G5 476 aa18.95■□□□□ 0.62
LIM2-202ENST00000596399 TCP11L1Q9NUJ3 509 aa18.95■□□□□ 0.62
LIM2-202ENST00000596399 CCDC171Q6TFL3 1326 aa18.95■□□□□ 0.62
LIM2-202ENST00000596399 ALDH5A1P51649 535 aaPredicted RBP18.94■□□□□ 0.62
LIM2-202ENST00000596399 CCL23P55773 120 aa18.94■□□□□ 0.62
LIM2-202ENST00000596399 RASIP1Q5U651 963 aa18.94■□□□□ 0.62
LIM2-202ENST00000596399 PPP1R13LQ8WUF5 828 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms