RNA–Protein interactions for RNA: ENST00000596386.1

PSMC4-204, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-204ENST00000596386 FPGSQ05932 587 aa18.52■□□□□ 0.56
PSMC4-204ENST00000596386 MUM1L1Q5H9M0 696 aa18.52■□□□□ 0.56
PSMC4-204ENST00000596386 RRP12Q5JTH9 1297 aaKnown RBP18.52■□□□□ 0.56
PSMC4-204ENST00000596386 GNASQ5JWF2 1037 aa18.52■□□□□ 0.56
PSMC4-204ENST00000596386 SMC5Q8IY18 1101 aa18.52■□□□□ 0.56
PSMC4-204ENST00000596386 FAM161BQ96MY7 647 aa18.52■□□□□ 0.56
PSMC4-204ENST00000596386 RANBP17Q9H2T7 1088 aaKnown RBP18.52■□□□□ 0.56
PSMC4-204ENST00000596386 TCP11L1Q9NUJ3 509 aa18.52■□□□□ 0.56
PSMC4-204ENST00000596386 TBX21Q9UL17 535 aa18.52■□□□□ 0.56
PSMC4-204ENST00000596386 CCPG1Q9ULG6 757 aa18.52■□□□□ 0.56
PSMC4-204ENST00000596386 LCTP09848 1927 aa18.51■□□□□ 0.55
PSMC4-204ENST00000596386 A0A0U1RQG5 324 aaPredicted RBP18.51■□□□□ 0.55
PSMC4-204ENST00000596386 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.51■□□□□ 0.55
PSMC4-204ENST00000596386 TRIM6-TRIM34B2RNG4 842 aa18.51■□□□□ 0.55
PSMC4-204ENST00000596386 CDK7P50613 346 aa18.51■□□□□ 0.55
PSMC4-204ENST00000596386 TNFAIP2Q03169 654 aa18.51■□□□□ 0.55
PSMC4-204ENST00000596386 BTNL9Q6UXG8 535 aa18.51■□□□□ 0.55
PSMC4-204ENST00000596386 RNPC3Q96LT9 517 aaKnown RBP18.51■□□□□ 0.55
PSMC4-204ENST00000596386 TMEM47Q9BQJ4 181 aa18.51■□□□□ 0.55
PSMC4-204ENST00000596386 EYSQ5T1H1 3165 aa18.5■□□□□ 0.55
PSMC4-204ENST00000596386 PCP11498 1178 aaKnown RBP18.5■□□□□ 0.55
PSMC4-204ENST00000596386 SLC16A2P36021 539 aa18.5■□□□□ 0.55
PSMC4-204ENST00000596386 HAND2P61296 217 aa18.5■□□□□ 0.55
PSMC4-204ENST00000596386 SYDE2Q5VT97 1194 aa18.5■□□□□ 0.55
PSMC4-204ENST00000596386 TTBK2Q6IQ55 1244 aa18.5■□□□□ 0.55
PSMC4-204ENST00000596386 NSMFQ6X4W1 530 aa18.5■□□□□ 0.55
PSMC4-204ENST00000596386 RILPL2Q969X0 211 aa18.5■□□□□ 0.55
PSMC4-204ENST00000596386 RWDD1Q9H446 243 aaPredicted RBP18.5■□□□□ 0.55
PSMC4-204ENST00000596386 GNEQ9Y223 722 aaKnown RBP18.5■□□□□ 0.55
PSMC4-204ENST00000596386 ARVCFO00192 962 aa18.49■□□□□ 0.55
PSMC4-204ENST00000596386 DLL1O00548 723 aa18.49■□□□□ 0.55
PSMC4-204ENST00000596386 TIMP1P01033 207 aa18.49■□□□□ 0.55
PSMC4-204ENST00000596386 AKNAD1Q5T1N1 836 aa18.49■□□□□ 0.55
PSMC4-204ENST00000596386 NOL8Q76FK4 1167 aaKnown RBP18.49■□□□□ 0.55
PSMC4-204ENST00000596386 TLK2Q86UE8 772 aa18.49■□□□□ 0.55
PSMC4-204ENST00000596386 VTI1AQ96AJ9 217 aa18.49■□□□□ 0.55
PSMC4-204ENST00000596386 DDX49Q9Y6V7 483 aaKnown RBP18.49■□□□□ 0.55
PSMC4-204ENST00000596386 FRMPD2Q68DX3 1309 aaPredicted RBP18.49■□□□□ 0.55
PSMC4-204ENST00000596386 PDHBP11177 359 aa18.48■□□□□ 0.55
PSMC4-204ENST00000596386 SDSP20132 328 aa18.48■□□□□ 0.55
PSMC4-204ENST00000596386 MFAP1P55081 439 aaKnown RBP18.48■□□□□ 0.55
PSMC4-204ENST00000596386 BEX3Q00994 111 aa18.48■□□□□ 0.55
PSMC4-204ENST00000596386 B4GALNT3Q6L9W6 998 aa18.48■□□□□ 0.55
PSMC4-204ENST00000596386 MFSD5Q6N075 450 aa18.48■□□□□ 0.55
PSMC4-204ENST00000596386 MFSD6Q6ZSS7 791 aa18.48■□□□□ 0.55
PSMC4-204ENST00000596386 TBC1D10CQ8IV04 446 aa18.48■□□□□ 0.55
PSMC4-204ENST00000596386 FBXO16Q8IX29 292 aaPredicted RBP18.48■□□□□ 0.55
PSMC4-204ENST00000596386 FAM126BQ8IXS8 530 aa18.48■□□□□ 0.55
PSMC4-204ENST00000596386 MORC4Q8TE76 937 aa18.48■□□□□ 0.55
PSMC4-204ENST00000596386 SEMA6BQ9H3T3 888 aa18.48■□□□□ 0.55
PSMC4-204ENST00000596386 GPCPD1Q9NPB8 672 aa18.48■□□□□ 0.55
PSMC4-204ENST00000596386 SMPD1P17405 629 aa18.47■□□□□ 0.55
PSMC4-204ENST00000596386 FSCN1Q16658 493 aaKnown RBP18.47■□□□□ 0.55
PSMC4-204ENST00000596386 TAPT1Q6NXT6 567 aa18.47■□□□□ 0.55
PSMC4-204ENST00000596386 EEPD1Q7L9B9 569 aa18.47■□□□□ 0.55
PSMC4-204ENST00000596386 CHD1LQ86WJ1 897 aa18.47■□□□□ 0.55
PSMC4-204ENST00000596386 PLEKHM2Q8IWE5 1019 aa18.47■□□□□ 0.55
PSMC4-204ENST00000596386 TTC14Q96N46 770 aa18.47■□□□□ 0.55
PSMC4-204ENST00000596386 PURBQ96QR8 312 aaKnown RBP18.47■□□□□ 0.55
PSMC4-204ENST00000596386 OSBPL3Q9H4L5 887 aa18.47■□□□□ 0.55
PSMC4-204ENST00000596386 RNF41Q9H4P4 317 aaPredicted RBP18.47■□□□□ 0.55
PSMC4-204ENST00000596386 VTA1Q9NP79 307 aa18.47■□□□□ 0.55
PSMC4-204ENST00000596386 PDGFCQ9NRA1 345 aa18.47■□□□□ 0.55
PSMC4-204ENST00000596386 LAMA4Q16363 1823 aa18.46■□□□□ 0.55
PSMC4-204ENST00000596386 NFIBO00712 420 aa18.46■□□□□ 0.55
PSMC4-204ENST00000596386 TLR3O15455 904 aaKnown RBP18.46■□□□□ 0.55
PSMC4-204ENST00000596386 CABYRO75952 493 aa18.46■□□□□ 0.55
PSMC4-204ENST00000596386 SNHG28P0DPA3 235 aa18.46■□□□□ 0.55
PSMC4-204ENST00000596386 NUCB1Q02818 461 aa18.46■□□□□ 0.55
PSMC4-204ENST00000596386 ZNF543Q08ER8 600 aa18.46■□□□□ 0.55
PSMC4-204ENST00000596386 BAATQ14032 418 aaPredicted RBP18.46■□□□□ 0.55
PSMC4-204ENST00000596386 IQSEC1Q6DN90 963 aa18.46■□□□□ 0.55
PSMC4-204ENST00000596386 CXCL17Q6UXB2 119 aa18.46■□□□□ 0.55
PSMC4-204ENST00000596386 SLC43A3Q8NBI5 491 aa18.46■□□□□ 0.55
PSMC4-204ENST00000596386 ESR2Q92731 530 aa18.46■□□□□ 0.55
PSMC4-204ENST00000596386 YTHDC1Q96MU7 727 aaKnown RBP18.46■□□□□ 0.55
PSMC4-204ENST00000596386 CDX2Q99626 313 aaPredicted RBP18.46■□□□□ 0.55
PSMC4-204ENST00000596386 AP5M1Q9H0R1 490 aa18.46■□□□□ 0.55
PSMC4-204ENST00000596386 TTYH1Q9H313 450 aaPredicted RBP18.46■□□□□ 0.55
PSMC4-204ENST00000596386 ADD3Q9UEY8 706 aaKnown RBP18.46■□□□□ 0.55
PSMC4-204ENST00000596386 PNMA2Q9UL42 364 aa18.46■□□□□ 0.55
PSMC4-204ENST00000596386 Q9Y3F1 56 aa18.46■□□□□ 0.55
PSMC4-204ENST00000596386 NEDD4P46934 1319 aa18.46■□□□□ 0.55
PSMC4-204ENST00000596386 PRUNE2Q8WUY3 3088 aa18.46■□□□□ 0.54
PSMC4-204ENST00000596386 TMEM265A0A087WTH1 108 aa18.45■□□□□ 0.54
PSMC4-204ENST00000596386 LOC102724159A0A0B4J2E5 919 aa18.45■□□□□ 0.54
PSMC4-204ENST00000596386 IGHDP01880 384 aa18.45■□□□□ 0.54
PSMC4-204ENST00000596386 PTGS1P23219 599 aa18.45■□□□□ 0.54
PSMC4-204ENST00000596386 ALDH5A1P51649 535 aaPredicted RBP18.45■□□□□ 0.54
PSMC4-204ENST00000596386 PPIGQ13427 754 aaKnown RBP eCLIP18.45■□□□□ 0.54
PSMC4-204ENST00000596386 PWP2Q15269 919 aaKnown RBP18.45■□□□□ 0.54
PSMC4-204ENST00000596386 PTPDC1A2A3K4 754 aa18.44■□□□□ 0.54
PSMC4-204ENST00000596386 DYNC1LI2O43237 492 aaPredicted RBP18.44■□□□□ 0.54
PSMC4-204ENST00000596386 ZEB2O60315 1214 aa18.44■□□□□ 0.54
PSMC4-204ENST00000596386 CD4P01730 458 aa18.44■□□□□ 0.54
PSMC4-204ENST00000596386 NT5C2P49902 561 aa18.44■□□□□ 0.54
PSMC4-204ENST00000596386 SLC30A10Q6XR72 485 aa18.44■□□□□ 0.54
PSMC4-204ENST00000596386 KIAA1211Q6ZU35 1233 aa18.44■□□□□ 0.54
PSMC4-204ENST00000596386 CLEC4DQ8WXI8 215 aa18.44■□□□□ 0.54
PSMC4-204ENST00000596386 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.44■□□□□ 0.543e-8■□□□□ 9.9
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms