RNA–Protein interactions for RNA: ENST00000594497.1

CAPN12-203, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-203ENST00000594497 SMC5Q8IY18 1101 aa19.08■□□□□ 0.64
CAPN12-203ENST00000594497 RILPL2Q969X0 211 aa19.08■□□□□ 0.64
CAPN12-203ENST00000594497 VTI1AQ96AJ9 217 aa19.08■□□□□ 0.64
CAPN12-203ENST00000594497 RANBP17Q9H2T7 1088 aaKnown RBP19.08■□□□□ 0.64
CAPN12-203ENST00000594497 RWDD1Q9H446 243 aaPredicted RBP19.08■□□□□ 0.64
CAPN12-203ENST00000594497 CYP39A1Q9NYL5 469 aa19.08■□□□□ 0.64
CAPN12-203ENST00000594497 CDH23Q9H251 3354 aa19.07■□□□□ 0.64
CAPN12-203ENST00000594497 ICAM1P05362 532 aa19.07■□□□□ 0.64
CAPN12-203ENST00000594497 PCP11498 1178 aaKnown RBP19.07■□□□□ 0.64
CAPN12-203ENST00000594497 MFAP1P55081 439 aaKnown RBP19.07■□□□□ 0.64
CAPN12-203ENST00000594497 HAND2P61296 217 aa19.07■□□□□ 0.64
CAPN12-203ENST00000594497 NKX3-2P78367 333 aa19.07■□□□□ 0.64
CAPN12-203ENST00000594497 FPGSQ05932 587 aa19.07■□□□□ 0.64
CAPN12-203ENST00000594497 BTNL9Q6UXG8 535 aa19.07■□□□□ 0.64
CAPN12-203ENST00000594497 NOL8Q76FK4 1167 aaKnown RBP19.07■□□□□ 0.64
CAPN12-203ENST00000594497 FAM161BQ96MY7 647 aa19.07■□□□□ 0.64
CAPN12-203ENST00000594497 GUCD1Q96NT3 240 aa19.07■□□□□ 0.64
CAPN12-203ENST00000594497 TMEM47Q9BQJ4 181 aa19.07■□□□□ 0.64
CAPN12-203ENST00000594497 ASTN1O14525 1302 aa19.06■□□□□ 0.64
CAPN12-203ENST00000594497 A0A0U1RQG5 324 aaPredicted RBP19.06■□□□□ 0.64
CAPN12-203ENST00000594497 CTAGE5O15320 804 aa19.06■□□□□ 0.64
CAPN12-203ENST00000594497 SLC16A2P36021 539 aa19.06■□□□□ 0.64
CAPN12-203ENST00000594497 CDK7P50613 346 aa19.06■□□□□ 0.64
CAPN12-203ENST00000594497 EPHB4P54760 987 aa19.06■□□□□ 0.64
CAPN12-203ENST00000594497 SMAD3P84022 425 aaKnown RBP19.06■□□□□ 0.64
CAPN12-203ENST00000594497 SYDE2Q5VT97 1194 aa19.06■□□□□ 0.64
CAPN12-203ENST00000594497 TTBK2Q6IQ55 1244 aa19.06■□□□□ 0.64
CAPN12-203ENST00000594497 B4GALNT3Q6L9W6 998 aa19.06■□□□□ 0.64
CAPN12-203ENST00000594497 NSMFQ6X4W1 530 aa19.06■□□□□ 0.64
CAPN12-203ENST00000594497 MFSD6Q6ZSS7 791 aa19.06■□□□□ 0.64
CAPN12-203ENST00000594497 RNPC3Q96LT9 517 aaKnown RBP19.06■□□□□ 0.64
CAPN12-203ENST00000594497 YTHDC1Q96MU7 727 aaKnown RBP19.06■□□□□ 0.64
CAPN12-203ENST00000594497 FRMPD2Q68DX3 1309 aaPredicted RBP19.05■□□□□ 0.64
CAPN12-203ENST00000594497 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.05■□□□□ 0.64
CAPN12-203ENST00000594497 ARVCFO00192 962 aa19.05■□□□□ 0.64
CAPN12-203ENST00000594497 TIMP1P01033 207 aa19.05■□□□□ 0.64
CAPN12-203ENST00000594497 AKNAD1Q5T1N1 836 aa19.05■□□□□ 0.64
CAPN12-203ENST00000594497 TLK2Q86UE8 772 aa19.05■□□□□ 0.64
CAPN12-203ENST00000594497 CHD1LQ86WJ1 897 aa19.05■□□□□ 0.64
CAPN12-203ENST00000594497 TTC14Q96N46 770 aa19.05■□□□□ 0.64
CAPN12-203ENST00000594497 GPCPD1Q9NPB8 672 aa19.05■□□□□ 0.64
CAPN12-203ENST00000594497 TBX21Q9UL17 535 aa19.05■□□□□ 0.64
CAPN12-203ENST00000594497 GNEQ9Y223 722 aaKnown RBP19.05■□□□□ 0.64
CAPN12-203ENST00000594497 DLL1O00548 723 aa19.04■□□□□ 0.64
CAPN12-203ENST00000594497 PDHBP11177 359 aa19.04■□□□□ 0.64
CAPN12-203ENST00000594497 SDSP20132 328 aa19.04■□□□□ 0.64
CAPN12-203ENST00000594497 BEX3Q00994 111 aa19.04■□□□□ 0.64
CAPN12-203ENST00000594497 TBC1D10CQ8IV04 446 aa19.04■□□□□ 0.64
CAPN12-203ENST00000594497 RNF41Q9H4P4 317 aaPredicted RBP19.04■□□□□ 0.64
CAPN12-203ENST00000594497 DDX49Q9Y6V7 483 aaKnown RBP19.04■□□□□ 0.64
CAPN12-203ENST00000594497 NUCB1Q02818 461 aa19.03■□□□□ 0.64
CAPN12-203ENST00000594497 FSCN1Q16658 493 aaKnown RBP19.03■□□□□ 0.64
CAPN12-203ENST00000594497 IQSEC1Q6DN90 963 aa19.03■□□□□ 0.64
CAPN12-203ENST00000594497 PLEKHM2Q8IWE5 1019 aa19.03■□□□□ 0.64
CAPN12-203ENST00000594497 FBXO16Q8IX29 292 aaPredicted RBP19.03■□□□□ 0.64
CAPN12-203ENST00000594497 AP5M1Q9H0R1 490 aa19.03■□□□□ 0.64
CAPN12-203ENST00000594497 OSBPL3Q9H4L5 887 aa19.03■□□□□ 0.64
CAPN12-203ENST00000594497 VTA1Q9NP79 307 aa19.03■□□□□ 0.64
CAPN12-203ENST00000594497 ADD3Q9UEY8 706 aaKnown RBP19.03■□□□□ 0.64
CAPN12-203ENST00000594497 PNMA2Q9UL42 364 aa19.03■□□□□ 0.64
CAPN12-203ENST00000594497 TLR3O15455 904 aaKnown RBP19.02■□□□□ 0.64
CAPN12-203ENST00000594497 CABYRO75952 493 aa19.02■□□□□ 0.64
CAPN12-203ENST00000594497 SMPD1P17405 629 aa19.02■□□□□ 0.64
CAPN12-203ENST00000594497 BAATQ14032 418 aaPredicted RBP19.02■□□□□ 0.64
CAPN12-203ENST00000594497 MFSD5Q6N075 450 aa19.02■□□□□ 0.64
CAPN12-203ENST00000594497 TAPT1Q6NXT6 567 aa19.02■□□□□ 0.64
CAPN12-203ENST00000594497 EEPD1Q7L9B9 569 aa19.02■□□□□ 0.64
CAPN12-203ENST00000594497 FAM126BQ8IXS8 530 aa19.02■□□□□ 0.64
CAPN12-203ENST00000594497 MORC4Q8TE76 937 aa19.02■□□□□ 0.64
CAPN12-203ENST00000594497 ESR2Q92731 530 aa19.02■□□□□ 0.64
CAPN12-203ENST00000594497 PURBQ96QR8 312 aaKnown RBP19.02■□□□□ 0.64
CAPN12-203ENST00000594497 SEMA6BQ9H3T3 888 aa19.02■□□□□ 0.64
CAPN12-203ENST00000594497 PDGFCQ9NRA1 345 aa19.02■□□□□ 0.64
CAPN12-203ENST00000594497 PTPDC1A2A3K4 754 aa19.01■□□□□ 0.63
CAPN12-203ENST00000594497 NFIBO00712 420 aa19.01■□□□□ 0.63
CAPN12-203ENST00000594497 ZNF213O14771 459 aa19.01■□□□□ 0.63
CAPN12-203ENST00000594497 DYNC1LI2O43237 492 aaPredicted RBP19.01■□□□□ 0.63
CAPN12-203ENST00000594497 ZEB2O60315 1214 aa19.01■□□□□ 0.63
CAPN12-203ENST00000594497 IGHDP01880 384 aa19.01■□□□□ 0.63
CAPN12-203ENST00000594497 SNHG28P0DPA3 235 aa19.01■□□□□ 0.63
CAPN12-203ENST00000594497 ALDH5A1P51649 535 aaPredicted RBP19.01■□□□□ 0.63
CAPN12-203ENST00000594497 ZNF543Q08ER8 600 aa19.01■□□□□ 0.63
CAPN12-203ENST00000594497 PPIGQ13427 754 aaKnown RBP eCLIP19.01■□□□□ 0.631e-7■■■□□ 19
CAPN12-203ENST00000594497 CXCL17Q6UXB2 119 aa19.01■□□□□ 0.63
CAPN12-203ENST00000594497 DIAPH3Q9NSV4 1193 aa19.01■□□□□ 0.63
CAPN12-203ENST00000594497 Q9Y3F1 56 aa19.01■□□□□ 0.63
CAPN12-203ENST00000594497 PRUNE2Q8WUY3 3088 aa19.01■□□□□ 0.63
CAPN12-203ENST00000594497 NEDD4P46934 1319 aa19■□□□□ 0.63
CAPN12-203ENST00000594497 MYH6P13533 1939 aa19■□□□□ 0.63
CAPN12-203ENST00000594497 LOC102724159A0A0B4J2E5 919 aa19■□□□□ 0.63
CAPN12-203ENST00000594497 NT5C2P49902 561 aa19■□□□□ 0.63
CAPN12-203ENST00000594497 PWP2Q15269 919 aaKnown RBP19■□□□□ 0.63
CAPN12-203ENST00000594497 CWC27Q6UX04 472 aaKnown RBP19■□□□□ 0.63
CAPN12-203ENST00000594497 KIAA1211Q6ZU35 1233 aa19■□□□□ 0.63
CAPN12-203ENST00000594497 CDX2Q99626 313 aaPredicted RBP19■□□□□ 0.63
CAPN12-203ENST00000594497 TTYH1Q9H313 450 aaPredicted RBP19■□□□□ 0.63
CAPN12-203ENST00000594497 WDR19Q8NEZ3 1342 aa19■□□□□ 0.63
CAPN12-203ENST00000594497 TMEM265A0A087WTH1 108 aa18.99■□□□□ 0.63
CAPN12-203ENST00000594497 HIP1O00291 1037 aa18.99■□□□□ 0.63
CAPN12-203ENST00000594497 CD4P01730 458 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms