RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 BIN2Q9UBW5 565 aaPredicted RBP15.08■□□□□ 0
VRK3-205ENST00000593919 C19orf81C9J6K1 198 aa15.07■□□□□ 0
VRK3-205ENST00000593919 TRAF5O00463 557 aa15.07■□□□□ 0
VRK3-205ENST00000593919 PPP6R2O75170 966 aa15.07■□□□□ 0
VRK3-205ENST00000593919 CAMK4Q16566 473 aa15.07■□□□□ 0
VRK3-205ENST00000593919 MAP3K11Q16584 847 aa15.07■□□□□ 0
VRK3-205ENST00000593919 INF2Q27J81 1249 aa15.07■□□□□ 0
VRK3-205ENST00000593919 JAKMIP3Q5VZ66 844 aa15.07■□□□□ 0
VRK3-205ENST00000593919 ANKRD13AQ8IZ07 590 aa15.07■□□□□ 0
VRK3-205ENST00000593919 CUL5Q93034 780 aa15.07■□□□□ 0
VRK3-205ENST00000593919 CLMNQ96JQ2 1002 aa15.07■□□□□ 0
VRK3-205ENST00000593919 C12orf42Q96LP6 360 aa15.07■□□□□ 0
VRK3-205ENST00000593919 SLF1Q9BQI6 1058 aa15.07■□□□□ 0
VRK3-205ENST00000593919 PSTPIP2Q9H939 334 aa15.07■□□□□ 0
VRK3-205ENST00000593919 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.07■□□□□ 0
VRK3-205ENST00000593919 DACT1Q9NYF0 836 aa15.07■□□□□ 0
VRK3-205ENST00000593919 DCAF8L1A6NGE4 600 aa15.07■□□□□ 0
VRK3-205ENST00000593919 FLOT1O75955 427 aa15.07■□□□□ 0
VRK3-205ENST00000593919 FMR1Q06787 632 aaKnown RBP eCLIP15.07■□□□□ 0
VRK3-205ENST00000593919 UBE2SQ16763 222 aa15.07■□□□□ 0
VRK3-205ENST00000593919 ADALQ6DHV7 355 aa15.07■□□□□ 0
VRK3-205ENST00000593919 CCDC174Q6PII3 467 aa15.07■□□□□ 0
VRK3-205ENST00000593919 KRT25Q7Z3Z0 450 aa15.07■□□□□ 0
VRK3-205ENST00000593919 JMYQ8N9B5 988 aa15.07■□□□□ 0
VRK3-205ENST00000593919 PRPF38AQ8NAV1 312 aaKnown RBP15.07■□□□□ 0
VRK3-205ENST00000593919 ELP3Q9H9T3 547 aa15.07■□□□□ 0
VRK3-205ENST00000593919 TMEM260Q9NX78 707 aa15.07■□□□□ 0
VRK3-205ENST00000593919 CEP131Q9UPN4 1083 aa15.07■□□□□ 0
VRK3-205ENST00000593919 LOC285556D6RIA3 1793 aa15.07■□□□□ 0
VRK3-205ENST00000593919 CLK2P49760 499 aaKnown RBP15.06■□□□□ 0
VRK3-205ENST00000593919 MRPL12P52815 198 aaKnown RBP15.06■□□□□ 0
VRK3-205ENST00000593919 ZNF174Q15697 407 aa15.06■□□□□ 0
VRK3-205ENST00000593919 UVSSAQ2YD98 709 aa15.06■□□□□ 0
VRK3-205ENST00000593919 AXDND1Q5T1B0 1012 aaPredicted RBP15.06■□□□□ 0
VRK3-205ENST00000593919 ZSCAN30Q86W11 494 aa15.06■□□□□ 0
VRK3-205ENST00000593919 NMRK2Q9NPI5 230 aa15.06■□□□□ 0
VRK3-205ENST00000593919 NONOQ15233 471 aaKnown RBP eCLIP15.05■□□□□ 0
VRK3-205ENST00000593919 ARMC9Q7Z3E5 817 aa15.05■□□□□ 0
VRK3-205ENST00000593919 LDHDQ86WU2 507 aa15.05■□□□□ 0
VRK3-205ENST00000593919 RBM46Q8TBY0 533 aaKnown RBP15.05■□□□□ 0
VRK3-205ENST00000593919 ZNF526Q8TF50 670 aaPredicted RBP15.05■□□□□ 0
VRK3-205ENST00000593919 TNMDQ9H2S6 317 aa15.05■□□□□ 0
VRK3-205ENST00000593919 PPP1R9AQ9ULJ8 1098 aa15.05■□□□□ 0
VRK3-205ENST00000593919 MRVI1Q9Y6F6 885 aa15.05■□□□□ 0
VRK3-205ENST00000593919 USP17L15C9J2P7 530 aa15.05■□□□□ -0
VRK3-205ENST00000593919 USP17L13C9JLJ4 530 aa15.05■□□□□ -0
VRK3-205ENST00000593919 USP17L11C9JVI0 530 aa15.05■□□□□ -0
VRK3-205ENST00000593919 USP17L18D6R9N7 530 aa15.05■□□□□ -0
VRK3-205ENST00000593919 USP17L22D6RA61 530 aa15.05■□□□□ -0
VRK3-205ENST00000593919 USP17L17D6RBQ6 530 aa15.05■□□□□ -0
VRK3-205ENST00000593919 USP17L19D6RCP7 530 aa15.05■□□□□ -0
VRK3-205ENST00000593919 USP17L20D6RJB6 530 aa15.05■□□□□ -0
VRK3-205ENST00000593919 OPLAHO14841 1288 aa15.05■□□□□ -0
VRK3-205ENST00000593919 NR1I2O75469 434 aa15.05■□□□□ -0
VRK3-205ENST00000593919 CCDC192P0DO97 292 aa15.05■□□□□ -0
VRK3-205ENST00000593919 MCM7P33993 719 aa15.05■□□□□ -0
VRK3-205ENST00000593919 USP17L24Q0WX57 530 aa15.05■□□□□ -0
VRK3-205ENST00000593919 USP17L6PQ6QN14 398 aa15.05■□□□□ -0
VRK3-205ENST00000593919 CCAR1Q8IX12 1150 aaKnown RBP15.05■□□□□ -0
VRK3-205ENST00000593919 TBCKQ8TEA7 893 aa15.05■□□□□ -0
VRK3-205ENST00000593919 OTUD5Q96G74 571 aa15.05■□□□□ -0
VRK3-205ENST00000593919 GLT8D2Q9H1C3 349 aa15.05■□□□□ -0
VRK3-205ENST00000593919 GOLPH3LQ9H4A5 285 aa15.05■□□□□ -0
VRK3-205ENST00000593919 ZNF408Q9H9D4 720 aa15.05■□□□□ -0
VRK3-205ENST00000593919 DDX19AQ9NUU7 478 aaKnown RBP15.05■□□□□ -0
VRK3-205ENST00000593919 TMOD4Q9NZQ9 345 aa15.05■□□□□ -0
VRK3-205ENST00000593919 USP25Q9UHP3 1055 aa15.05■□□□□ -0
VRK3-205ENST00000593919 A0A1W2PQ27 194 aa15.04■□□□□ -0
VRK3-205ENST00000593919 A0A1W2PQ64 194 aa15.04■□□□□ -0
VRK3-205ENST00000593919 A0A1W2PQD8 194 aa15.04■□□□□ -0
VRK3-205ENST00000593919 MEIS2O14770 477 aa15.04■□□□□ -0
VRK3-205ENST00000593919 IRF6O14896 467 aa15.04■□□□□ -0
VRK3-205ENST00000593919 BMP15O95972 392 aa15.04■□□□□ -0
VRK3-205ENST00000593919 SH3D19Q5HYK7 790 aa15.04■□□□□ -0
VRK3-205ENST00000593919 ERO1BQ86YB8 467 aa15.04■□□□□ -0
VRK3-205ENST00000593919 CKAP2LQ8IYA6 745 aa15.04■□□□□ -0
VRK3-205ENST00000593919 CLIC6Q96NY7 704 aa15.04■□□□□ -0
VRK3-205ENST00000593919 RBBP6Q7Z6E9 1792 aaKnown RBP15.04■□□□□ -0
VRK3-205ENST00000593919 SPDYE5A6NIY4 337 aa15.04■□□□□ -0
VRK3-205ENST00000593919 MSNP26038 577 aaKnown RBP15.04■□□□□ -0
VRK3-205ENST00000593919 PPATQ06203 517 aa15.04■□□□□ -0
VRK3-205ENST00000593919 TRAF1Q13077 416 aa15.04■□□□□ -0
VRK3-205ENST00000593919 PTGDRQ13258 359 aa15.04■□□□□ -0
VRK3-205ENST00000593919 HS1BP3Q53T59 392 aa15.04■□□□□ -0
VRK3-205ENST00000593919 KRI1Q8N9T8 703 aaKnown RBP15.04■□□□□ -0
VRK3-205ENST00000593919 FSIP1Q8NA03 581 aa15.04■□□□□ -0
VRK3-205ENST00000593919 MRPS27Q92552 414 aaKnown RBP15.04■□□□□ -0
VRK3-205ENST00000593919 CLSTN2Q9H4D0 955 aa15.04■□□□□ -0
VRK3-205ENST00000593919 SLC38A10Q9HBR0 1119 aa15.04■□□□□ -0
VRK3-205ENST00000593919 FBXO2Q9UK22 296 aaPredicted RBP15.04■□□□□ -0
VRK3-205ENST00000593919 MORC2Q9Y6X9 1032 aaPredicted RBP15.04■□□□□ -0
VRK3-205ENST00000593919 ZNF536O15090 1300 aa15.03■□□□□ -0
VRK3-205ENST00000593919 CUTAO60888 179 aa15.03■□□□□ -0
VRK3-205ENST00000593919 ICAM1P05362 532 aa15.03■□□□□ -0
VRK3-205ENST00000593919 PTPREP23469 700 aa15.03■□□□□ -0
VRK3-205ENST00000593919 ATP2C1P98194 919 aaPredicted RBP15.03■□□□□ -0
VRK3-205ENST00000593919 GRIN1Q05586 938 aa15.03■□□□□ -0
VRK3-205ENST00000593919 NEK8Q86SG6 692 aa15.03■□□□□ -0
VRK3-205ENST00000593919 UBE2Q2Q8WVN8 375 aa15.03■□□□□ -0
VRK3-205ENST00000593919 WNK4Q96J92 1243 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms